RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SSUH2Q9Y2M2 353 aa8.55□□□□□ -1.04
MTHFD1-210ENST00000555252 TNFRSF13BO14836 293 aaPredicted RBP8.55□□□□□ -1.04
MTHFD1-210ENST00000555252 BSPH1Q075Z2 132 aa8.55□□□□□ -1.04
MTHFD1-210ENST00000555252 TMEM200BQ69YZ2 307 aa8.55□□□□□ -1.04
MTHFD1-210ENST00000555252 PVRIGQ6DKI7 326 aa8.55□□□□□ -1.04
MTHFD1-210ENST00000555252 GFRALQ6UXV0 394 aa8.55□□□□□ -1.04
MTHFD1-210ENST00000555252 NPIPB3Q92617 1050 aa8.55□□□□□ -1.04
MTHFD1-210ENST00000555252 HARBI1Q96MB7 349 aa8.55□□□□□ -1.04
MTHFD1-210ENST00000555252 MRPL20Q9BYC9 149 aaKnown RBP8.55□□□□□ -1.04
MTHFD1-210ENST00000555252 OTORQ9NRC9 128 aa8.55□□□□□ -1.04
MTHFD1-210ENST00000555252 TP73-AS1Q9UF72 201 aa8.55□□□□□ -1.04
MTHFD1-210ENST00000555252 SPTBN2O15020 2390 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 A0A1B0GUT8 65 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 THBDP07204 575 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 CRYGCP07315 174 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 HOXB4P17483 251 aaPredicted RBP8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 COL8A1P27658 744 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 LINC00322Q6ZN03 302 aaPredicted RBP8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 FA2HQ7L5A8 372 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 Q86TA4 180 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 OR10W1Q8NGF6 305 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 OR4C13Q8NGP0 309 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 OR2K2Q8NGT1 345 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 ABHD17AQ96GS6 310 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 NPFFR1Q9GZQ6 430 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 FNDC4Q9H6D8 234 aaPredicted RBP8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 KAAG1Q9UBP8 84 aa8.54□□□□□ -1.04
MTHFD1-210ENST00000555252 GP9P14770 177 aa8.53□□□□□ -1.04
MTHFD1-210ENST00000555252 MC5RP33032 325 aa8.53□□□□□ -1.04
MTHFD1-210ENST00000555252 PIFOQ8TCI5 191 aa8.53□□□□□ -1.04
MTHFD1-210ENST00000555252 TMEM14CQ9P0S9 112 aa8.53□□□□□ -1.04
MTHFD1-210ENST00000555252 SMAD7O15105 426 aaKnown RBP8.53□□□□□ -1.04
MTHFD1-210ENST00000555252 CT45A10P0DMU9 189 aa8.53□□□□□ -1.04
MTHFD1-210ENST00000555252 ZNF137PP52743 207 aa8.53□□□□□ -1.04
MTHFD1-210ENST00000555252 ZNF493Q6ZR52 646 aa8.53□□□□□ -1.04
MTHFD1-210ENST00000555252 RND1Q92730 232 aa8.53□□□□□ -1.04
MTHFD1-210ENST00000555252 Q9H3A6 140 aa8.53□□□□□ -1.04
MTHFD1-210ENST00000555252 A0A0G2JLM5 398 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 A1L4Q6 167 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 SAP30O75446 220 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 CCL3L1P16619 93 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 SSBP2P81877 361 aaPredicted RBP8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 RBPJQ06330 500 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 ASPHD1Q5U4P2 390 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 RNASE6Q93091 150 aaKnown RBP8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 RABAC1Q9UI14 185 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 TMEM11P17152 192 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 WT1-ASQ06250 92 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 VMA21Q3ZAQ7 101 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 PRSS3P2Q8NHM4 247 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 C8orf46Q8TAG6 207 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 BLNKQ8WV28 456 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 CCL17Q92583 94 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 TNFRSF14Q92956 283 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 SPOCK3Q9BQ16 436 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 DYNLRB1Q9NP97 96 aa8.52□□□□□ -1.05
MTHFD1-210ENST00000555252 AKAP13Q12802 2813 aa8.51□□□□□ -1.05
MTHFD1-210ENST00000555252 SPTBN4Q9H254 2564 aa8.51□□□□□ -1.05
MTHFD1-210ENST00000555252 SHISA9B4DS77 424 aa8.51□□□□□ -1.05
MTHFD1-210ENST00000555252 OVOL3O00110 214 aa8.51□□□□□ -1.05
MTHFD1-210ENST00000555252 LGALS7P47929 136 aa8.51□□□□□ -1.05
MTHFD1-210ENST00000555252 KIR3DS1Q14943 382 aa8.51□□□□□ -1.05
MTHFD1-210ENST00000555252 PSG3Q16557 428 aa8.51□□□□□ -1.05
MTHFD1-210ENST00000555252 TMEM75Q8N9X5 138 aa8.51□□□□□ -1.05
MTHFD1-210ENST00000555252 Q8NA96 180 aa8.51□□□□□ -1.05
MTHFD1-210ENST00000555252 TMEM116Q8NCL8 245 aa8.51□□□□□ -1.05
MTHFD1-210ENST00000555252 ZNRD1Q9P1U0 126 aa8.51□□□□□ -1.05
MTHFD1-210ENST00000555252 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 TMEM189A5PLL7 270 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 CGB1A6NKQ9 187 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 H3BUT2 72 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 DLX6P56179 175 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 TMEM155Q4W5P6 130 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 ADAMTSL5Q6ZMM2 481 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 JMJD8Q96S16 334 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 RPH3ALQ9UNE2 315 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 U3KQK5 164 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 URB1O60287 2271 aaKnown RBP8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 LOXP28300 417 aaPredicted RBP8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 LINC01559Q495D7 138 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 LYPD2Q6UXB3 125 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 HIGD1BQ9P298 99 aa8.5□□□□□ -1.05
MTHFD1-210ENST00000555252 CFAP47Q6ZTR5 3102 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 B9A039 149 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 K7EQM0 130 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 FCN3O75636 299 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 IGLV2-23P01705 113 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 FABP2P12104 132 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 ORM2P19652 201 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 CD24P25063 80 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 ZNF138P52744 262 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 RIPPLY3P57055 190 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 LYPD1Q8N2G4 141 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 SPCS1Q9Y6A9 102 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 E7EQL1 145 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 H0Y8G0 127 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 IGLV2-11P01706 119 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 CSN3P07498 182 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 IGHV1-8P0DP01 117 aa8.49□□□□□ -1.05
MTHFD1-210ENST00000555252 VKORC1Q9BQB6 163 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms