RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 DEFB4AO15263 64 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 IAPPP10997 89 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 HLA-DRB4P13762 266 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 S100A11P31949 105 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 SULT1A1P50225 295 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 PAX9P55771 341 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 S100A10P60903 97 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 RAB32Q13637 225 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 SAMD13Q5VXD3 122 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 SPATA31B1PQ5VZV4 182 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 TMEM144Q7Z5S9 345 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 S100A7AQ86SG5 101 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 RPP25LQ8N5L8 163 aaKnown RBP4.78□□□□□ -1.64
SLIRP-203ENST00000554074 THAP6Q8TBB0 222 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 PPP1R1CQ8WVI7 109 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 ACY3Q96HD9 319 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 NEU1Q99519 415 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 TRGV9Q99603 122 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 APLNQ9ULZ1 77 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 RNF24Q9Y225 148 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 LSM5Q9Y4Y9 91 aaKnown RBP4.78□□□□□ -1.64
SLIRP-203ENST00000554074 HLA-DRB4X5D2U9 266 aa4.78□□□□□ -1.64
SLIRP-203ENST00000554074 VPS13DQ5THJ4 4388 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 PCLOQ9Y6V0 5065 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 IGKV1D-37A0A075B6S9 117 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 ELOA3CA0A087WX78 387 aaPredicted RBP4.77□□□□□ -1.65
SLIRP-203ENST00000554074 SMIM9A6NGZ8 99 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 ZFP92A6NM28 416 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 PMS2P5A8MQ11 134 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 MPDU1O75352 247 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 MPC2O95563 127 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 HLA-DMBP28068 263 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 PSMB3P49720 205 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 SMCPP49901 116 aaPredicted RBP4.77□□□□□ -1.65
SLIRP-203ENST00000554074 BCAP31P51572 246 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 CAV2P51636 162 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 SELENOTP62341 195 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 RAB31Q13636 194 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 GAMTQ14353 236 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 FCN2Q15485 313 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 PXDC1Q5TGL8 231 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 ZNF705AQ6ZN79 300 aaPredicted RBP4.77□□□□□ -1.65
SLIRP-203ENST00000554074 Q6ZNX1 250 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 TMEM252Q8N6L7 170 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 THAP8Q8NA92 274 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 OR11H7Q8NGC8 314 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 CHAC2Q8WUX2 184 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 RNF126Q9BV68 326 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 NPVFQ9HCQ7 196 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 SLC45A2Q9UMX9 530 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 RYR1P21817 5038 aa4.77□□□□□ -1.65
SLIRP-203ENST00000554074 NACAE9PAV3 2078 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 TMEM189A5PLL7 270 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 ZNF705FA8MVS1 300 aaPredicted RBP4.76□□□□□ -1.65
SLIRP-203ENST00000554074 IGLL5B9A064 214 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 ISLRO14498 428 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 SOCS3O14543 225 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 SIX6O95475 246 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 AMBPP02760 352 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 METTL15P1P0C7V9 234 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 ZNF705DP0CH99 300 aaPredicted RBP4.76□□□□□ -1.65
SLIRP-203ENST00000554074 ZNF705BP0CI00 300 aaPredicted RBP4.76□□□□□ -1.65
SLIRP-203ENST00000554074 CXCL3P19876 107 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 ID1P41134 155 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 MEOX2P50222 304 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 ZNF90Q03938 601 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 VWC2Q2TAL6 325 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 FOXI2Q6ZQN5 318 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 Q6ZTC4 211 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 TMEM147Q9BVK8 224 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 SAV1Q9H4B6 383 aaPredicted RBP4.76□□□□□ -1.65
SLIRP-203ENST00000554074 CLEC5AQ9NY25 188 aa4.76□□□□□ -1.65
SLIRP-203ENST00000554074 PAIP2BQ9ULR5 123 aaKnown RBP4.76□□□□□ -1.65
SLIRP-203ENST00000554074 IGHV4-4A0A075B6R2 117 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 IGKV1OR2-108A0A075B7D4 117 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 TEX48A0A1B0GUV7 120 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 A8MTW9 85 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 H0YIZ8 118 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 H3BP45 60 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 RPL12P30050 165 aaKnown RBP4.75□□□□□ -1.65
SLIRP-203ENST00000554074 AKR1C1Q04828 323 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 SLC38A11Q08AI6 406 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 C12orf74Q32Q52 190 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 LRRC37A5PQ49AS3 106 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 TEPPQ6URK8 271 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 ACOT7LQ6ZUV0 252 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 INO80EQ8NBZ0 244 aaPredicted RBP4.75□□□□□ -1.65
SLIRP-203ENST00000554074 BPIFCQ8NFQ6 507 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 AQP10Q96PS8 301 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 PBDC1Q9BVG4 233 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 PARD6GQ9BYG4 376 aaPredicted RBP4.75□□□□□ -1.65
SLIRP-203ENST00000554074 KCNIP2Q9NS61 270 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 UQCC1Q9NVA1 299 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 MBD2Q9UBB5 411 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 XCL2Q9UBD3 114 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 CELA1Q9UNI1 258 aa4.75□□□□□ -1.65
SLIRP-203ENST00000554074 MUC4Q99102 2169 aa4.74□□□□□ -1.65
SLIRP-203ENST00000554074 DEFB131BA0A096LNP1 70 aa4.74□□□□□ -1.65
SLIRP-203ENST00000554074 FAM24AA6NFZ4 105 aa4.74□□□□□ -1.65
SLIRP-203ENST00000554074 HMSDA8MTL9 139 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms