RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 MEOX2P50222 304 aa13.66□□□□□ -0.22
HDAC4-217ENST00000553145 VWC2Q2TAL6 325 aa13.66□□□□□ -0.22
HDAC4-217ENST00000553145 TMEM41BQ5BJD5 291 aa13.66□□□□□ -0.22
HDAC4-217ENST00000553145 CSNK1G2-AS1Q8NCQ2 148 aa13.66□□□□□ -0.22
HDAC4-217ENST00000553145 ARV1Q9H2C2 271 aa13.66□□□□□ -0.22
HDAC4-217ENST00000553145 WDR83OSQ9Y284 106 aa13.66□□□□□ -0.22
HDAC4-217ENST00000553145 SACSQ9NZJ4 4579 aa13.66□□□□□ -0.22
HDAC4-217ENST00000553145 RYR2Q92736 4967 aa13.66□□□□□ -0.22
HDAC4-217ENST00000553145 F6UB75 175 aa13.65□□□□□ -0.22
HDAC4-217ENST00000553145 DEFB4AO15263 64 aa13.65□□□□□ -0.22
HDAC4-217ENST00000553145 ATF4P18848 351 aaPredicted RBP13.65□□□□□ -0.22
HDAC4-217ENST00000553145 S100A7P31151 101 aa13.65□□□□□ -0.22
HDAC4-217ENST00000553145 H2BFSP57053 126 aa13.65□□□□□ -0.22
HDAC4-217ENST00000553145 PMS2P11Q13670 270 aa13.65□□□□□ -0.22
HDAC4-217ENST00000553145 LRRC37A5PQ49AS3 106 aa13.65□□□□□ -0.22
HDAC4-217ENST00000553145 FOXI2Q6ZQN5 318 aa13.65□□□□□ -0.22
HDAC4-217ENST00000553145 C16orf92Q96LL3 132 aa13.65□□□□□ -0.22
HDAC4-217ENST00000553145 NMES1Q9C002 83 aa13.65□□□□□ -0.22
HDAC4-217ENST00000553145 C11orf68Q9H3H3 251 aaKnown RBP13.65□□□□□ -0.22
HDAC4-217ENST00000553145 UQCC1Q9NVA1 299 aa13.65□□□□□ -0.22
HDAC4-217ENST00000553145 OR5AC2Q9NZP5 309 aa13.65□□□□□ -0.22
HDAC4-217ENST00000553145 TENM2Q9NT68 2774 aa13.65□□□□□ -0.22
HDAC4-217ENST00000553145 TRAV8-2A0A0B4J237 113 aa13.64□□□□□ -0.23
HDAC4-217ENST00000553145 LCE6AA0A183 80 aa13.64□□□□□ -0.23
HDAC4-217ENST00000553145 UBE2L5PA0A1B0GUS4 154 aa13.64□□□□□ -0.23
HDAC4-217ENST00000553145 H0YIZ8 118 aa13.64□□□□□ -0.23
HDAC4-217ENST00000553145 IGKV3-20P01619 116 aa13.64□□□□□ -0.23
HDAC4-217ENST00000553145 CAMLGP49069 296 aa13.64□□□□□ -0.23
HDAC4-217ENST00000553145 IGFL4Q6B9Z1 124 aa13.64□□□□□ -0.23
HDAC4-217ENST00000553145 STX12Q86Y82 276 aa13.64□□□□□ -0.23
HDAC4-217ENST00000553145 Q8NAQ8 132 aa13.64□□□□□ -0.23
HDAC4-217ENST00000553145 CXorf65A6NEN9 183 aa13.63□□□□□ -0.23
HDAC4-217ENST00000553145 ZNF705EA8MWA4 302 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-217ENST00000553145 MRPS12O15235 138 aaKnown RBP13.63□□□□□ -0.23
HDAC4-217ENST00000553145 RPL7P18124 248 aaKnown RBP13.63□□□□□ -0.23
HDAC4-217ENST00000553145 S100A11P31949 105 aa13.63□□□□□ -0.23
HDAC4-217ENST00000553145 PXDC1Q5TGL8 231 aa13.63□□□□□ -0.23
HDAC4-217ENST00000553145 SAMD13Q5VXD3 122 aa13.63□□□□□ -0.23
HDAC4-217ENST00000553145 MORN5Q5VZ52 161 aa13.63□□□□□ -0.23
HDAC4-217ENST00000553145 MIC13Q5XKP0 118 aa13.63□□□□□ -0.23
HDAC4-217ENST00000553145 TMEM37Q8WXS4 190 aa13.63□□□□□ -0.23
HDAC4-217ENST00000553145 XCL2Q9UBD3 114 aa13.63□□□□□ -0.23
HDAC4-217ENST00000553145 X6R8D5 127 aa13.63□□□□□ -0.23
HDAC4-217ENST00000553145 A0A0J9YX75 114 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 SSNA1O43805 119 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 FXYD7P58549 80 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 HBG1P69891 147 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 HBG2P69892 147 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 PRR20EP86478 221 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 PRR20CP86479 221 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 PRR20DP86480 221 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 PRR20BP86481 221 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 PRR20AP86496 221 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 NHLH2Q02577 135 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 FGL1Q08830 312 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 LINC00305Q7Z4B0 112 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 RNF182Q8N6D2 247 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 RPRMQ9NS64 109 aa13.62□□□□□ -0.23
HDAC4-217ENST00000553145 IGHV4-28A0A0C4DH34 117 aa13.61□□□□□ -0.23
HDAC4-217ENST00000553145 COX7A2P2O60397 106 aa13.61□□□□□ -0.23
HDAC4-217ENST00000553145 RBMY1A1P0DJD3 496 aaKnown RBP13.61□□□□□ -0.23
HDAC4-217ENST00000553145 RBMY1CP0DJD4 496 aa13.61□□□□□ -0.23
HDAC4-217ENST00000553145 NUTF2P61970 127 aaKnown RBP13.61□□□□□ -0.23
HDAC4-217ENST00000553145 BAXQ07812 192 aa13.61□□□□□ -0.23
HDAC4-217ENST00000553145 RBMY1FQ15415 496 aaKnown RBP13.61□□□□□ -0.23
HDAC4-217ENST00000553145 FAM78BQ5VT40 261 aa13.61□□□□□ -0.23
HDAC4-217ENST00000553145 ZNF709Q8N972 641 aa13.61□□□□□ -0.23
HDAC4-217ENST00000553145 OR4B1Q8NGF8 309 aa13.61□□□□□ -0.23
HDAC4-217ENST00000553145 CLUHP3Q96NS8 147 aa13.61□□□□□ -0.23
HDAC4-217ENST00000553145 A0A087X0K7 114 aa13.6□□□□□ -0.23
HDAC4-217ENST00000553145 E5RGE8 158 aa13.6□□□□□ -0.23
HDAC4-217ENST00000553145 RLN2P04090 185 aa13.6□□□□□ -0.23
HDAC4-217ENST00000553145 HLA-DMBP28068 263 aa13.6□□□□□ -0.23
HDAC4-217ENST00000553145 CYCSP99999 105 aaKnown RBP13.6□□□□□ -0.23
HDAC4-217ENST00000553145 RAB31Q13636 194 aa13.6□□□□□ -0.23
HDAC4-217ENST00000553145 OPCMLQ14982 345 aa13.6□□□□□ -0.23
HDAC4-217ENST00000553145 ATP6V1FQ16864 119 aa13.6□□□□□ -0.23
HDAC4-217ENST00000553145 EBLN2Q6P2I7 272 aa13.6□□□□□ -0.23
HDAC4-217ENST00000553145 PPP1R1CQ8WVI7 109 aa13.6□□□□□ -0.23
HDAC4-217ENST00000553145 C1QTNF4Q9BXJ3 329 aa13.6□□□□□ -0.23
HDAC4-217ENST00000553145 SLC35B3Q9H1N7 401 aa13.6□□□□□ -0.23
HDAC4-217ENST00000553145 FGF7P21781 194 aa13.59□□□□□ -0.23
HDAC4-217ENST00000553145 NANOS2P60321 138 aaKnown RBP13.59□□□□□ -0.23
HDAC4-217ENST00000553145 C10orf113Q5VZT2 155 aa13.59□□□□□ -0.23
HDAC4-217ENST00000553145 SPATA31B1PQ5VZV4 182 aa13.59□□□□□ -0.23
HDAC4-217ENST00000553145 S100A7AQ86SG5 101 aa13.59□□□□□ -0.23
HDAC4-217ENST00000553145 ELOA3CA0A087WX78 387 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-217ENST00000553145 A8MTW9 85 aa13.58□□□□□ -0.24
HDAC4-217ENST00000553145 SNRPCP09234 159 aaKnown RBP13.58□□□□□ -0.24
HDAC4-217ENST00000553145 MIFP14174 115 aa13.58□□□□□ -0.24
HDAC4-217ENST00000553145 RPL29P47914 159 aaKnown RBP13.58□□□□□ -0.24
HDAC4-217ENST00000553145 CEMP1Q6PRD7 247 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-217ENST00000553145 OR5C1Q8NGR4 320 aa13.58□□□□□ -0.24
HDAC4-217ENST00000553145 C11orf45Q8TAV5 145 aa13.58□□□□□ -0.24
HDAC4-217ENST00000553145 CHAC2Q8WUX2 184 aa13.58□□□□□ -0.24
HDAC4-217ENST00000553145 RNF126Q9BV68 326 aa13.58□□□□□ -0.24
HDAC4-217ENST00000553145 SLC25A31Q9H0C2 315 aa13.58□□□□□ -0.24
HDAC4-217ENST00000553145 SLC39A9Q9NUM3 307 aa13.58□□□□□ -0.24
HDAC4-217ENST00000553145 ALG5Q9Y673 324 aa13.58□□□□□ -0.24
HDAC4-217ENST00000553145 NUPR2A6NF83 97 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms