RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 CD81P60033 236 aa16.07■□□□□ 0.16
NEK3-202ENST00000550841 FFAR4Q5NUL3 377 aa16.07■□□□□ 0.16
NEK3-202ENST00000550841 RPL7L1Q6DKI1 246 aaKnown RBP16.07■□□□□ 0.16
NEK3-202ENST00000550841 WFDC3Q8IUB2 231 aa16.07■□□□□ 0.16
NEK3-202ENST00000550841 HSD17B11Q8NBQ5 300 aa16.07■□□□□ 0.16
NEK3-202ENST00000550841 PSMG3Q9BT73 122 aaPredicted RBP16.07■□□□□ 0.16
NEK3-202ENST00000550841 SCRT1Q9BWW7 348 aa16.07■□□□□ 0.16
NEK3-202ENST00000550841 TFPI2P48307 235 aa16.06■□□□□ 0.16
NEK3-202ENST00000550841 SERF2P84101 59 aa16.06■□□□□ 0.16
NEK3-202ENST00000550841 ACOT6Q3I5F7 207 aaPredicted RBP16.06■□□□□ 0.16
NEK3-202ENST00000550841 SAMD13Q5VXD3 122 aa16.06■□□□□ 0.16
NEK3-202ENST00000550841 SLC25A32Q9H2D1 315 aa16.06■□□□□ 0.16
NEK3-202ENST00000550841 NRN1Q9NPD7 142 aa16.06■□□□□ 0.16
NEK3-202ENST00000550841 PFDN1O60925 122 aa16.05■□□□□ 0.16
NEK3-202ENST00000550841 CXCL2P19875 107 aa16.05■□□□□ 0.16
NEK3-202ENST00000550841 ATP6V0CP27449 155 aa16.05■□□□□ 0.16
NEK3-202ENST00000550841 MEOX2P50222 304 aa16.05■□□□□ 0.16
NEK3-202ENST00000550841 EIF5AP63241 154 aaKnown RBP16.05■□□□□ 0.16
NEK3-202ENST00000550841 LEMD1Q68G75 181 aa16.05■□□□□ 0.16
NEK3-202ENST00000550841 BPIFA4PQ86YQ2 179 aa16.05■□□□□ 0.16
NEK3-202ENST00000550841 FAM110AQ9BQ89 295 aa16.05■□□□□ 0.16
NEK3-202ENST00000550841 MBP02144 154 aa16.04■□□□□ 0.16
NEK3-202ENST00000550841 ZFP69Q49AA0 526 aa16.04■□□□□ 0.16
NEK3-202ENST00000550841 FAM78BQ5VT40 261 aa16.04■□□□□ 0.16
NEK3-202ENST00000550841 TMUB2Q71RG4 321 aa16.04■□□□□ 0.16
NEK3-202ENST00000550841 Q8N1Y9 231 aa16.04■□□□□ 0.16
NEK3-202ENST00000550841 OR2G3Q8NGZ4 309 aa16.04■□□□□ 0.16
NEK3-202ENST00000550841 MRPL32Q9BYC8 188 aaKnown RBP16.04■□□□□ 0.16
NEK3-202ENST00000550841 SEPSECSQ9HD40 501 aaKnown RBP16.04■□□□□ 0.16
NEK3-202ENST00000550841 CYTL1Q9NRR1 136 aa16.04■□□□□ 0.16
NEK3-202ENST00000550841 K7EIL1 84 aa16.03■□□□□ 0.16
NEK3-202ENST00000550841 K7EQG2 157 aa16.03■□□□□ 0.16
NEK3-202ENST00000550841 BCL2L11O43521 198 aa16.03■□□□□ 0.16
NEK3-202ENST00000550841 CD7P09564 240 aa16.03■□□□□ 0.16
NEK3-202ENST00000550841 ATF4P18848 351 aaPredicted RBP16.03■□□□□ 0.16
NEK3-202ENST00000550841 M6PRP20645 277 aa16.03■□□□□ 0.16
NEK3-202ENST00000550841 DEFB121Q5J5C9 76 aa16.03■□□□□ 0.16
NEK3-202ENST00000550841 SMAD5-AS1Q9Y6J3 95 aa16.03■□□□□ 0.16
NEK3-202ENST00000550841 OR11H12B2RN74 326 aa16.02■□□□□ 0.16
NEK3-202ENST00000550841 C4BPBP20851 252 aa16.02■□□□□ 0.16
NEK3-202ENST00000550841 ID1P41134 155 aa16.02■□□□□ 0.16
NEK3-202ENST00000550841 RHOBP62745 196 aa16.02■□□□□ 0.16
NEK3-202ENST00000550841 GCSAMLQ5JQS6 135 aa16.02■□□□□ 0.16
NEK3-202ENST00000550841 MRAPQ8TCY5 172 aa16.02■□□□□ 0.16
NEK3-202ENST00000550841 DCANP1Q8TF63 244 aa16.02■□□□□ 0.16
NEK3-202ENST00000550841 SNRPD3P62318 126 aaKnown RBP16.01■□□□□ 0.15
NEK3-202ENST00000550841 LGALSLQ3ZCW2 172 aaPredicted RBP16.01■□□□□ 0.15
NEK3-202ENST00000550841 ZNF471Q9BX82 626 aaPredicted RBP16.01■□□□□ 0.15
NEK3-202ENST00000550841 FUT9Q9Y231 359 aa16.01■□□□□ 0.15
NEK3-202ENST00000550841 A0A1W2PPV4 95 aa16■□□□□ 0.15
NEK3-202ENST00000550841 CD300CQ08708 224 aa16■□□□□ 0.15
NEK3-202ENST00000550841 TUBA4BQ9H853 241 aa16■□□□□ 0.15
NEK3-202ENST00000550841 A0A087X0K7 114 aa15.99■□□□□ 0.15
NEK3-202ENST00000550841 TRAV5A0A0B4J249 113 aa15.99■□□□□ 0.15
NEK3-202ENST00000550841 TAS2R45P59539 299 aa15.99■□□□□ 0.15
NEK3-202ENST00000550841 MORN5Q5VZ52 161 aa15.99■□□□□ 0.15
NEK3-202ENST00000550841 OR10G4Q8NGN3 311 aa15.99■□□□□ 0.15
NEK3-202ENST00000550841 OR10G9Q8NGN4 311 aa15.99■□□□□ 0.15
NEK3-202ENST00000550841 OR10G7Q8NGN6 311 aa15.99■□□□□ 0.15
NEK3-202ENST00000550841 C19orf73Q9NVV2 129 aa15.99■□□□□ 0.15
NEK3-202ENST00000550841 TMEM14CQ9P0S9 112 aa15.99■□□□□ 0.15
NEK3-202ENST00000550841 RFNGQ9Y644 331 aa15.99■□□□□ 0.15
NEK3-202ENST00000550841 A8MZ25 164 aa15.98■□□□□ 0.15
NEK3-202ENST00000550841 ISLRO14498 428 aa15.98■□□□□ 0.15
NEK3-202ENST00000550841 GUK1Q16774 197 aa15.98■□□□□ 0.15
NEK3-202ENST00000550841 LRRC20Q8TCA0 184 aa15.98■□□□□ 0.15
NEK3-202ENST00000550841 C16orf92Q96LL3 132 aa15.98■□□□□ 0.15
NEK3-202ENST00000550841 SH3BGRL3Q9H299 93 aa15.98■□□□□ 0.15
NEK3-202ENST00000550841 UBQLN2Q9UHD9 624 aa15.98■□□□□ 0.15
NEK3-202ENST00000550841 MRPS12O15235 138 aaKnown RBP15.97■□□□□ 0.15
NEK3-202ENST00000550841 SPP1P10451 314 aa15.97■□□□□ 0.15
NEK3-202ENST00000550841 PSMB3P49720 205 aa15.97■□□□□ 0.15
NEK3-202ENST00000550841 ODF3L2Q3SX64 289 aa15.97■□□□□ 0.15
NEK3-202ENST00000550841 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.97■□□□□ 0.15
NEK3-202ENST00000550841 MIR17HGQ75NE6 70 aa15.97■□□□□ 0.15
NEK3-202ENST00000550841 DEFB125Q8N687 156 aa15.97■□□□□ 0.15
NEK3-202ENST00000550841 HRH4Q9H3N8 390 aa15.97■□□□□ 0.15
NEK3-202ENST00000550841 MAP6D1Q9H9H5 199 aa15.97■□□□□ 0.15
NEK3-202ENST00000550841 ZNF688P0C7X2 276 aa15.96■□□□□ 0.15
NEK3-202ENST00000550841 IGHV4-30-4P0DP06 118 aa15.96■□□□□ 0.15
NEK3-202ENST00000550841 TPT1P13693 172 aaKnown RBP15.96■□□□□ 0.15
NEK3-202ENST00000550841 DEFB131AP59861 70 aa15.96■□□□□ 0.15
NEK3-202ENST00000550841 RAB2AP61019 212 aa15.96■□□□□ 0.15
NEK3-202ENST00000550841 TMEM41BQ5BJD5 291 aa15.96■□□□□ 0.15
NEK3-202ENST00000550841 AKR1C8PQ5T2L2 129 aa15.96■□□□□ 0.15
NEK3-202ENST00000550841 BAP18Q8IXM2 172 aa15.96■□□□□ 0.15
NEK3-202ENST00000550841 OR51M1Q9H341 326 aa15.96■□□□□ 0.15
NEK3-202ENST00000550841 PRKDCP78527 4128 aaKnown RBP15.96■□□□□ 0.14
NEK3-202ENST00000550841 SOCS3O14543 225 aa15.95■□□□□ 0.14
NEK3-202ENST00000550841 SEC11BP0C7V7 166 aa15.95■□□□□ 0.14
NEK3-202ENST00000550841 HIST1H1EP10412 219 aaKnown RBP15.95■□□□□ 0.14
NEK3-202ENST00000550841 KHDC3LQ587J8 217 aa15.95■□□□□ 0.14
NEK3-202ENST00000550841 SPATA31B1PQ5VZV4 182 aa15.95■□□□□ 0.14
NEK3-202ENST00000550841 FAM122CQ6P4D5 195 aa15.95■□□□□ 0.14
NEK3-202ENST00000550841 LCN15Q6UWW0 184 aa15.95■□□□□ 0.14
NEK3-202ENST00000550841 FAM24BQ8N5W8 94 aa15.95■□□□□ 0.14
NEK3-202ENST00000550841 PAXXQ9BUH6 204 aa15.95■□□□□ 0.14
NEK3-202ENST00000550841 SLC25A2Q9BXI2 301 aa15.95■□□□□ 0.14
NEK3-202ENST00000550841 ACTR3CQ9C0K3 210 aaPredicted RBP15.95■□□□□ 0.14
NEK3-202ENST00000550841 CLEC5AQ9NY25 188 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms