RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 SLC39A9Q9NUM3 307 aa14.34□□□□□ -0.11
DDX54-207ENST00000550016 PXMP4Q9Y6I8 212 aa14.34□□□□□ -0.11
DDX54-207ENST00000550016 B2MP61769 119 aa14.33□□□□□ -0.12
DDX54-207ENST00000550016 SNRPD3P62318 126 aaKnown RBP14.33□□□□□ -0.12
DDX54-207ENST00000550016 C10orf113Q5VZT2 155 aa14.33□□□□□ -0.12
DDX54-207ENST00000550016 LINC00305Q7Z4B0 112 aa14.33□□□□□ -0.12
DDX54-207ENST00000550016 ZNF709Q8N972 641 aa14.33□□□□□ -0.12
DDX54-207ENST00000550016 OR1L4Q8NGR5 311 aa14.33□□□□□ -0.12
DDX54-207ENST00000550016 OR2T35Q8NGX2 323 aa14.33□□□□□ -0.12
DDX54-207ENST00000550016 TMEM37Q8WXS4 190 aa14.33□□□□□ -0.12
DDX54-207ENST00000550016 RSG1Q9BU20 258 aa14.33□□□□□ -0.12
DDX54-207ENST00000550016 SMIM3Q9BZL3 60 aa14.33□□□□□ -0.12
DDX54-207ENST00000550016 WDR61Q9GZS3 305 aaKnown RBP14.33□□□□□ -0.12
DDX54-207ENST00000550016 IFNA5P01569 189 aa14.32□□□□□ -0.12
DDX54-207ENST00000550016 RPL7P18124 248 aaKnown RBP14.32□□□□□ -0.12
DDX54-207ENST00000550016 MEOX2P50222 304 aa14.32□□□□□ -0.12
DDX54-207ENST00000550016 AQP10Q96PS8 301 aa14.32□□□□□ -0.12
DDX54-207ENST00000550016 PFDN5Q99471 154 aa14.32□□□□□ -0.12
DDX54-207ENST00000550016 ID1P41134 155 aa14.31□□□□□ -0.12
DDX54-207ENST00000550016 PSMG4Q5JS54 123 aa14.31□□□□□ -0.12
DDX54-207ENST00000550016 SAMD13Q5VXD3 122 aa14.31□□□□□ -0.12
DDX54-207ENST00000550016 SCGB1C1Q8TD33 95 aa14.31□□□□□ -0.12
DDX54-207ENST00000550016 KCNIP2Q9NS61 270 aa14.31□□□□□ -0.12
DDX54-207ENST00000550016 U3KQK5 164 aa14.31□□□□□ -0.12
DDX54-207ENST00000550016 SOCS3O14543 225 aa14.3□□□□□ -0.12
DDX54-207ENST00000550016 RPL35AP18077 110 aaKnown RBP14.3□□□□□ -0.12
DDX54-207ENST00000550016 ATF4P18848 351 aaPredicted RBP14.3□□□□□ -0.12
DDX54-207ENST00000550016 PSMB3P49720 205 aa14.3□□□□□ -0.12
DDX54-207ENST00000550016 APOC4P55056 127 aa14.3□□□□□ -0.12
DDX54-207ENST00000550016 GATAD1Q8WUU5 269 aa14.3□□□□□ -0.12
DDX54-207ENST00000550016 SPATA25Q9BR10 227 aa14.3□□□□□ -0.12
DDX54-207ENST00000550016 WFDC1Q9HC57 220 aa14.3□□□□□ -0.12
DDX54-207ENST00000550016 NBEAL2Q6ZNJ1 2754 aa14.3□□□□□ -0.12
DDX54-207ENST00000550016 KIR2DL5BA0A0G2JN68 375 aa14.29□□□□□ -0.12
DDX54-207ENST00000550016 KIR2DL5BA0A0G2JPC4 375 aa14.29□□□□□ -0.12
DDX54-207ENST00000550016 C17orf112F2Z3M2 114 aa14.29□□□□□ -0.12
DDX54-207ENST00000550016 ISLRO14498 428 aa14.29□□□□□ -0.12
DDX54-207ENST00000550016 KIR2DL5AQ8N109 375 aa14.29□□□□□ -0.12
DDX54-207ENST00000550016 INO80EQ8NBZ0 244 aaPredicted RBP14.29□□□□□ -0.12
DDX54-207ENST00000550016 KIR2DL5BQ8NHK3 375 aa14.29□□□□□ -0.12
DDX54-207ENST00000550016 C17orf77Q96MU5 243 aa14.29□□□□□ -0.12
DDX54-207ENST00000550016 PARD6GQ9BYG4 376 aaPredicted RBP14.29□□□□□ -0.12
DDX54-207ENST00000550016 FXYD6-FXYD2A0A087WZ82 144 aa14.28□□□□□ -0.12
DDX54-207ENST00000550016 UBE2CO00762 179 aa14.28□□□□□ -0.12
DDX54-207ENST00000550016 MORN5Q5VZ52 161 aa14.28□□□□□ -0.12
DDX54-207ENST00000550016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.28□□□□□ -0.12
DDX54-207ENST00000550016 STHQ8IWL8 128 aa14.28□□□□□ -0.12
DDX54-207ENST00000550016 C16orf92Q96LL3 132 aa14.28□□□□□ -0.12
DDX54-207ENST00000550016 RCHY1Q96PM5 261 aa14.28□□□□□ -0.12
DDX54-207ENST00000550016 TENM3Q9P273 2699 aa14.28□□□□□ -0.12
DDX54-207ENST00000550016 KNCNA6PVL3 124 aa14.27□□□□□ -0.13
DDX54-207ENST00000550016 G3V3Q6 166 aa14.27□□□□□ -0.13
DDX54-207ENST00000550016 BPIFA4PQ86YQ2 179 aa14.27□□□□□ -0.13
DDX54-207ENST00000550016 LINC00052Q96N35 136 aa14.27□□□□□ -0.13
DDX54-207ENST00000550016 TNFSF18Q9UNG2 199 aa14.27□□□□□ -0.13
DDX54-207ENST00000550016 A0A087X0K7 114 aa14.26□□□□□ -0.13
DDX54-207ENST00000550016 MRPS12O15235 138 aaKnown RBP14.26□□□□□ -0.13
DDX54-207ENST00000550016 ACTL10Q5JWF8 245 aa14.26□□□□□ -0.13
DDX54-207ENST00000550016 CSTL1Q9H114 145 aa14.26□□□□□ -0.13
DDX54-207ENST00000550016 TRAV5A0A0B4J249 113 aa14.25□□□□□ -0.13
DDX54-207ENST00000550016 GCSAMLQ5JQS6 135 aa14.25□□□□□ -0.13
DDX54-207ENST00000550016 Q6ZNX1 250 aa14.25□□□□□ -0.13
DDX54-207ENST00000550016 RNF222A6NCQ9 220 aa14.24□□□□□ -0.13
DDX54-207ENST00000550016 ZNF266Q14584 549 aa14.24□□□□□ -0.13
DDX54-207ENST00000550016 FFAR4Q5NUL3 377 aa14.24□□□□□ -0.13
DDX54-207ENST00000550016 Q6ZWC4 215 aa14.24□□□□□ -0.13
DDX54-207ENST00000550016 TRPT1Q86TN4 253 aaKnown RBP14.24□□□□□ -0.13
DDX54-207ENST00000550016 RETNQ9HD89 108 aa14.24□□□□□ -0.13
DDX54-207ENST00000550016 RPRMQ9NS64 109 aa14.24□□□□□ -0.13
DDX54-207ENST00000550016 FAM78BQ5VT40 261 aa14.23□□□□□ -0.13
DDX54-207ENST00000550016 LRRC20Q8TCA0 184 aa14.23□□□□□ -0.13
DDX54-207ENST00000550016 C20orf173Q96LM9 149 aa14.23□□□□□ -0.13
DDX54-207ENST00000550016 TRAV8-2A0A0B4J237 113 aa14.22□□□□□ -0.13
DDX54-207ENST00000550016 H3BMM0 161 aa14.22□□□□□ -0.13
DDX54-207ENST00000550016 SMLR1H3BR10 107 aa14.22□□□□□ -0.13
DDX54-207ENST00000550016 CXCL2P19875 107 aa14.22□□□□□ -0.13
DDX54-207ENST00000550016 LCN15Q6UWW0 184 aa14.22□□□□□ -0.13
DDX54-207ENST00000550016 FOXI2Q6ZQN5 318 aa14.22□□□□□ -0.13
DDX54-207ENST00000550016 HRH4Q9H3N8 390 aa14.22□□□□□ -0.13
DDX54-207ENST00000550016 SAV1Q9H4B6 383 aaPredicted RBP14.22□□□□□ -0.13
DDX54-207ENST00000550016 TP53TG1Q9Y2A0 90 aa14.22□□□□□ -0.13
DDX54-207ENST00000550016 TIMM9Q9Y5J7 89 aa14.22□□□□□ -0.13
DDX54-207ENST00000550016 DNAH9Q9NYC9 4486 aa14.21□□□□□ -0.13
DDX54-207ENST00000550016 STAB2Q8WWQ8 2551 aa14.21□□□□□ -0.13
DDX54-207ENST00000550016 IGLC2P0DOY2 106 aa14.21□□□□□ -0.13
DDX54-207ENST00000550016 SPP1P10451 314 aa14.21□□□□□ -0.13
DDX54-207ENST00000550016 HLA-DRB4P13762 266 aa14.21□□□□□ -0.13
DDX54-207ENST00000550016 SPATA31B1PQ5VZV4 182 aa14.21□□□□□ -0.13
DDX54-207ENST00000550016 IGFL4Q6B9Z1 124 aa14.21□□□□□ -0.13
DDX54-207ENST00000550016 MORN3Q6PF18 240 aaPredicted RBP14.21□□□□□ -0.13
DDX54-207ENST00000550016 OVOL2Q9BRP0 275 aa14.21□□□□□ -0.13
DDX54-207ENST00000550016 MRPL32Q9BYC8 188 aaKnown RBP14.21□□□□□ -0.13
DDX54-207ENST00000550016 TMEM14CQ9P0S9 112 aa14.21□□□□□ -0.13
DDX54-207ENST00000550016 RFNGQ9Y644 331 aa14.21□□□□□ -0.13
DDX54-207ENST00000550016 HLA-DRB4X5D2U9 266 aa14.21□□□□□ -0.13
DDX54-207ENST00000550016 H3BQ15 152 aa14.2□□□□□ -0.14
DDX54-207ENST00000550016 ARPC5O15511 151 aa14.2□□□□□ -0.14
DDX54-207ENST00000550016 SPRY2O43597 315 aa14.2□□□□□ -0.14
DDX54-207ENST00000550016 SNRPCP09234 159 aaKnown RBP14.2□□□□□ -0.14
DDX54-207ENST00000550016 DEFB1P60022 68 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms