RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 OR10J3Q5JRS4 329 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 RASL11AQ6T310 242 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 Q71RC1 249 aaPredicted RBP14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 TBX15Q96SF7 602 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 BPESC1Q9GZL8 116 aa14.56□□□□□ -0.08
PRPF40B-208ENST00000548436 C19orf71A6NCJ1 209 aa14.55□□□□□ -0.08
PRPF40B-208ENST00000548436 MRPS12O15235 138 aaKnown RBP14.55□□□□□ -0.08
PRPF40B-208ENST00000548436 MFAP4P55083 255 aa14.55□□□□□ -0.08
PRPF40B-208ENST00000548436 LMO4P61968 165 aa14.55□□□□□ -0.08
PRPF40B-208ENST00000548436 FAM120AOSQ5T036 256 aa14.55□□□□□ -0.08
PRPF40B-208ENST00000548436 RCHY1Q96PM5 261 aa14.55□□□□□ -0.08
PRPF40B-208ENST00000548436 NAGKQ9UJ70 344 aa14.55□□□□□ -0.08
PRPF40B-208ENST00000548436 TRAV30A0A087WSZ9 112 aa14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 FCGR2BP31994 310 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 GOLT1AQ6ZVE7 132 aa14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 Q86TA4 180 aa14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 ZNF48Q96MX3 618 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 RPP21Q9H633 154 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 ZNF492Q9P255 531 aa14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 IGHV7-81A0A0B4J1V7 117 aa14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 A8MWP6 167 aa14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 NDUFB8O95169 186 aa14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 TCF24Q7RTU0 167 aa14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 Q8N9W7 124 aa14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 OR4F17Q8NGA8 305 aa14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 HSPB9Q9BQS6 159 aa14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 TBL2Q9Y4P3 447 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-208ENST00000548436 ZNF253O75346 499 aa14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 IGHV3-23P01764 117 aa14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 HLA-DRB1P01911 266 aa14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 UBE2E1P51965 193 aa14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 Q56UQ5 140 aa14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 SIGLEC15Q6ZMC9 328 aa14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 CIARTQ8N365 385 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 OR2J3O76001 311 aa14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 PRB4P10163 310 aaPredicted RBP14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 BRS3P32247 399 aa14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 PRNTQ86SH4 94 aa14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 GTSF1Q8WW33 167 aa14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 SAMD10Q9BYL1 202 aa14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 C21orf62Q9NYP8 219 aa14.53□□□□□ -0.08
PRPF40B-208ENST00000548436 P01737 135 aa14.52□□□□□ -0.09
PRPF40B-208ENST00000548436 REC114Q7Z4M0 266 aa14.52□□□□□ -0.09
PRPF40B-208ENST00000548436 ZNF414Q96IQ9 312 aa14.52□□□□□ -0.09
PRPF40B-208ENST00000548436 NOL4LQ96MY1 436 aaPredicted RBP14.52□□□□□ -0.09
PRPF40B-208ENST00000548436 POLR3KQ9Y2Y1 108 aaPredicted RBP14.52□□□□□ -0.09
PRPF40B-208ENST00000548436 A0A1B0GXF2 115 aa14.51□□□□□ -0.09
PRPF40B-208ENST00000548436 GPX1P07203 203 aa14.51□□□□□ -0.09
PRPF40B-208ENST00000548436 FAM106CPP0CH98 169 aa14.51□□□□□ -0.09
PRPF40B-208ENST00000548436 CAMPP49913 170 aa14.51□□□□□ -0.09
PRPF40B-208ENST00000548436 SSBP4Q9BWG4 385 aaPredicted RBP14.51□□□□□ -0.09
PRPF40B-208ENST00000548436 RNF24Q9Y225 148 aa14.51□□□□□ -0.09
PRPF40B-208ENST00000548436 A0A1W2PS18 150 aa14.51□□□□□ -0.09
PRPF40B-208ENST00000548436 SAA4P35542 130 aa14.51□□□□□ -0.09
PRPF40B-208ENST00000548436 CT83Q5H943 113 aa14.51□□□□□ -0.09
PRPF40B-208ENST00000548436 RNF114Q9Y508 228 aa14.51□□□□□ -0.09
PRPF40B-208ENST00000548436 ZFHX3Q15911 3703 aa14.51□□□□□ -0.09
PRPF40B-208ENST00000548436 CACNA1BQ00975 2339 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 ZNF785A8K8V0 405 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 A8MWL6 223 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 OVOL3O00110 214 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 ATP5L2Q7Z4Y8 100 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 DAZAP1Q96EP5 407 aaKnown RBP14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 KCNS1Q96KK3 526 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 THYN1Q9P016 225 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 OR2T8A6NH00 312 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 NPIPB6E9PJ23 425 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 LYPD1Q8N2G4 141 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 SIGLECL1Q8N7X8 197 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 C18orf32Q8TCD1 76 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 ASCL2Q99929 193 aa14.5□□□□□ -0.09
PRPF40B-208ENST00000548436 EPG5Q9HCE0 2579 aa14.49□□□□□ -0.09
PRPF40B-208ENST00000548436 TRBV6-1A0A0K0K1D8 114 aa14.49□□□□□ -0.09
PRPF40B-208ENST00000548436 ZNF705FA8MVS1 300 aaPredicted RBP14.49□□□□□ -0.09
PRPF40B-208ENST00000548436 ZNF705DP0CH99 300 aaPredicted RBP14.49□□□□□ -0.09
PRPF40B-208ENST00000548436 ZNF705BP0CI00 300 aaPredicted RBP14.49□□□□□ -0.09
PRPF40B-208ENST00000548436 PRR31Q5SQ13 230 aa14.49□□□□□ -0.09
PRPF40B-208ENST00000548436 C1RLQ9NZP8 487 aa14.49□□□□□ -0.09
PRPF40B-208ENST00000548436 VPS13CQ709C8 3753 aa14.48□□□□□ -0.09
PRPF40B-208ENST00000548436 CTSGP08311 255 aa14.48□□□□□ -0.09
PRPF40B-208ENST00000548436 TMEM75Q8N9X5 138 aa14.48□□□□□ -0.09
PRPF40B-208ENST00000548436 PGLYRP4Q96LB8 373 aa14.48□□□□□ -0.09
PRPF40B-208ENST00000548436 LPAR2Q9HBW0 351 aa14.48□□□□□ -0.09
PRPF40B-208ENST00000548436 FBXL7Q9UJT9 491 aa14.48□□□□□ -0.09
PRPF40B-208ENST00000548436 M0R3E3 92 aa14.48□□□□□ -0.09
PRPF40B-208ENST00000548436 COL8A1P27658 744 aa14.48□□□□□ -0.09
PRPF40B-208ENST00000548436 PIP4P2Q8N4L2 257 aa14.48□□□□□ -0.09
PRPF40B-208ENST00000548436 ZC2HC1AQ96GY0 325 aa14.48□□□□□ -0.09
PRPF40B-208ENST00000548436 ABCA2Q9BZC7 2435 aa14.48□□□□□ -0.09
PRPF40B-208ENST00000548436 DIRC3C9JPN6 131 aa14.47□□□□□ -0.09
PRPF40B-208ENST00000548436 IGHV4-39P01824 125 aa14.47□□□□□ -0.09
PRPF40B-208ENST00000548436 AMTP48728 403 aa14.47□□□□□ -0.09
PRPF40B-208ENST00000548436 C1orf194Q5T5A4 169 aa14.47□□□□□ -0.09
PRPF40B-208ENST00000548436 TOMM20LQ6UXN7 152 aa14.47□□□□□ -0.09
PRPF40B-208ENST00000548436 OR2D3Q8NGH3 330 aa14.47□□□□□ -0.09
PRPF40B-208ENST00000548436 GFRA4Q9GZZ7 299 aa14.47□□□□□ -0.09
PRPF40B-208ENST00000548436 ZNF324O75467 553 aaPredicted RBP14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 PMCHP20382 165 aa14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 HBBP68871 147 aa14.46□□□□□ -0.09
PRPF40B-208ENST00000548436 C16orf54Q6UWD8 224 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms