RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 COX7A2P2O60397 106 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 SPP1P10451 314 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 S100A11P31949 105 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 CAMLGP49069 296 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 MEOX2P50222 304 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 CYCSP99999 105 aaKnown RBP8.66□□□□□ -1.02
RAB5C-204ENST00000547517 EWSR1Q01844 656 aaKnown RBP eCLIP8.66□□□□□ -1.02
RAB5C-204ENST00000547517 RAB31Q13636 194 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 NDUFA5Q16718 116 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 VWC2Q2TAL6 325 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 MORN3Q6PF18 240 aaPredicted RBP8.66□□□□□ -1.02
RAB5C-204ENST00000547517 GATAD1Q8WUU5 269 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 PPP1R1CQ8WVI7 109 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 C16orf92Q96LL3 132 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 GPR82Q96P67 336 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 RSG1Q9BU20 258 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 ARV1Q9H2C2 271 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 WDR83OSQ9Y284 106 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 ALG5Q9Y673 324 aa8.66□□□□□ -1.02
RAB5C-204ENST00000547517 ISLRO14498 428 aa8.65□□□□□ -1.02
RAB5C-204ENST00000547517 RPL7P18124 248 aaKnown RBP8.65□□□□□ -1.02
RAB5C-204ENST00000547517 ATF4P18848 351 aaPredicted RBP8.65□□□□□ -1.02
RAB5C-204ENST00000547517 FGF7P21781 194 aa8.65□□□□□ -1.02
RAB5C-204ENST00000547517 FGL1Q08830 312 aa8.65□□□□□ -1.02
RAB5C-204ENST00000547517 PXDC1Q5TGL8 231 aa8.65□□□□□ -1.02
RAB5C-204ENST00000547517 GDF5OSQ5U4N7 250 aa8.65□□□□□ -1.02
RAB5C-204ENST00000547517 SAMD13Q5VXD3 122 aa8.65□□□□□ -1.02
RAB5C-204ENST00000547517 MIC13Q5XKP0 118 aa8.65□□□□□ -1.02
RAB5C-204ENST00000547517 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.65□□□□□ -1.02
RAB5C-204ENST00000547517 PATE2Q6UY27 113 aa8.65□□□□□ -1.02
RAB5C-204ENST00000547517 S100A7AQ86SG5 101 aa8.65□□□□□ -1.02
RAB5C-204ENST00000547517 SLC25A31Q9H0C2 315 aa8.65□□□□□ -1.02
RAB5C-204ENST00000547517 H3BMM0 161 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 BOLA2-SMG1P6H3BVE0 249 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 IGKV3-20P01619 116 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 GIG44P09565 113 aaPredicted RBP8.64□□□□□ -1.03
RAB5C-204ENST00000547517 PET100P0DJ07 73 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 HLA-DRB4P13762 266 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 NHLH2Q02577 135 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 CLINT1Q14677 625 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 OPCMLQ14982 345 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 FOXI2Q6ZQN5 318 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 LINC00305Q7Z4B0 112 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 OR5C1Q8NGR4 320 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 OR11H2Q8NH07 326 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 THAP6Q8TBB0 222 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 C20orf173Q96LM9 149 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 C17orf77Q96MU5 243 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 RARRES2Q99969 163 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 SAV1Q9H4B6 383 aaPredicted RBP8.64□□□□□ -1.03
RAB5C-204ENST00000547517 CLEC5AQ9NY25 188 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 HLA-DRB4X5D2U9 266 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 AGRNO00468 2067 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 RYR3Q15413 4870 aa8.64□□□□□ -1.03
RAB5C-204ENST00000547517 F6UB75 175 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 MPC2O95563 127 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 B2MP61769 119 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 PRR20EP86478 221 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 PRR20CP86479 221 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 PRR20DP86480 221 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 PRR20BP86481 221 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 PRR20AP86496 221 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 ATP6V1FQ16864 119 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 TMEM41BQ5BJD5 291 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 MORN5Q5VZ52 161 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 C10orf113Q5VZT2 155 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 IGFL4Q6B9Z1 124 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 Q6ZRG5 221 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 IL17DQ8TAD2 202 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 TMEM37Q8WXS4 190 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 PXMP4Q9Y6I8 212 aa8.63□□□□□ -1.03
RAB5C-204ENST00000547517 ELOA3CA0A087WX78 387 aaPredicted RBP8.62□□□□□ -1.03
RAB5C-204ENST00000547517 A0A087X0K7 114 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 TRAV8-2A0A0B4J237 113 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 CXCL3P19876 107 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 RPL29P47914 159 aaKnown RBP8.62□□□□□ -1.03
RAB5C-204ENST00000547517 FXYD7P58549 80 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 NUTF2P61970 127 aaKnown RBP8.62□□□□□ -1.03
RAB5C-204ENST00000547517 PMS2P11Q13670 270 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 EBLN2Q6P2I7 272 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 RNF182Q8N6D2 247 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 OR4B1Q8NGF8 309 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 NPCDR1Q9BY65 106 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 RPRMQ9NS64 109 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 SLC39A9Q9NUM3 307 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 MBD2Q9UBB5 411 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 RNF24Q9Y225 148 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 CSMD3Q7Z407 3707 aa8.62□□□□□ -1.03
RAB5C-204ENST00000547517 CXorf65A6NEN9 183 aa8.61□□□□□ -1.03
RAB5C-204ENST00000547517 DEFB4AO15263 64 aa8.61□□□□□ -1.03
RAB5C-204ENST00000547517 MPDU1O75352 247 aa8.61□□□□□ -1.03
RAB5C-204ENST00000547517 SNRPCP09234 159 aaKnown RBP8.61□□□□□ -1.03
RAB5C-204ENST00000547517 FCN2Q15485 313 aa8.61□□□□□ -1.03
RAB5C-204ENST00000547517 ZNF738Q8NE65 137 aa8.61□□□□□ -1.03
RAB5C-204ENST00000547517 OR11H7Q8NGC8 314 aa8.61□□□□□ -1.03
RAB5C-204ENST00000547517 OR1L4Q8NGR5 311 aa8.61□□□□□ -1.03
RAB5C-204ENST00000547517 PFDN5Q99471 154 aa8.61□□□□□ -1.03
RAB5C-204ENST00000547517 RNF126Q9BV68 326 aa8.61□□□□□ -1.03
RAB5C-204ENST00000547517 MED28Q9H204 178 aa8.61□□□□□ -1.03
RAB5C-204ENST00000547517 XCL2Q9UBD3 114 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms