RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 PXDC1Q5TGL8 231 aa6.73□□□□□ -1.33
YBX3-218ENST00000546298 TMEM14EPQ6UXP3 125 aa6.73□□□□□ -1.33
YBX3-218ENST00000546298 TMEM182Q6ZP80 229 aaPredicted RBP6.73□□□□□ -1.33
YBX3-218ENST00000546298 MITD1Q8WV92 249 aa6.73□□□□□ -1.33
YBX3-218ENST00000546298 SDHCQ99643 169 aaPredicted RBP6.73□□□□□ -1.33
YBX3-218ENST00000546298 SHANK2-AS3Q9BTD1 123 aa6.73□□□□□ -1.33
YBX3-218ENST00000546298 NDUFAF3Q9BU61 184 aa6.73□□□□□ -1.33
YBX3-218ENST00000546298 SLC25A39Q9BZJ4 359 aaPredicted RBP6.73□□□□□ -1.33
YBX3-218ENST00000546298 SLC35B3Q9H1N7 401 aa6.73□□□□□ -1.33
YBX3-218ENST00000546298 GSKIPQ9P0R6 139 aa6.73□□□□□ -1.33
YBX3-218ENST00000546298 CELA1Q9UNI1 258 aa6.73□□□□□ -1.33
YBX3-218ENST00000546298 PMS2P5A8MQ11 134 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 F6UB75 175 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 H3BRN7 92 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 L7N2F9 121 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 METTL15P1P0C7V9 234 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 LINC00869P0C866 280 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 B2MP61769 119 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 VAMP2P63027 116 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 FGL1Q08830 312 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 RRN3P1Q2M238 152 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 TEPPQ6URK8 271 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 ZNF767PQ75MW2 155 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 ZNF709Q8N972 641 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 ZBTB8BQ8NAP8 495 aaPredicted RBP6.72□□□□□ -1.33
YBX3-218ENST00000546298 LRRC20Q8TCA0 184 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 FAM210BQ96KR6 192 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 TMEM208Q9BTX3 173 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 GGACTQ9BVM4 153 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 SCRT1Q9BWW7 348 aa6.72□□□□□ -1.33
YBX3-218ENST00000546298 A8MTW9 85 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 K7EPK0 472 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 GOSR2O14653 212 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 LYRM1O43325 122 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 P0DMU3 169 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 FAM231AP0DMU4 169 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 FAM231CP0DMU5 169 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 BTCP35070 178 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 RRAS2P62070 204 aaPredicted RBP6.71□□□□□ -1.34
YBX3-218ENST00000546298 PRR20EP86478 221 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 PRR20CP86479 221 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 PRR20DP86480 221 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 PRR20BP86481 221 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 PRR20AP86496 221 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 OXA1LQ15070 435 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 ZNF546Q86UE3 836 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 ZNF738Q8NE65 137 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 C20orf173Q96LM9 149 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 IGF2BP2-AS1Q96M15 143 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 NIPSNAP3BQ9BS92 247 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 PPP1R14DQ9NXH3 145 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 DYNC2H1Q8NCM8 4307 aaKnown RBP6.71□□□□□ -1.34
YBX3-218ENST00000546298 DNAH7Q8WXX0 4024 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 STARD9Q9P2P6 4700 aa6.71□□□□□ -1.34
YBX3-218ENST00000546298 LOC102723971A0A1B0GUV8 181 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 INSP01308 110 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 TCRBP04435 133 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 CNN1P51911 297 aaKnown RBP6.7□□□□□ -1.34
YBX3-218ENST00000546298 RAB31Q13636 194 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 FAM222AQ5U5X8 452 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 AMTNQ6UX39 209 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 C1orf158Q8N1D5 194 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 C17orf77Q96MU5 243 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 ARL6Q9H0F7 186 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 C20orf85Q9H1P6 137 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 ARV1Q9H2C2 271 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 DKK2Q9UBU2 259 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 RCL1Q9Y2P8 373 aaKnown RBP6.7□□□□□ -1.34
YBX3-218ENST00000546298 YTHDF2Q9Y5A9 579 aaKnown RBP6.7□□□□□ -1.34
YBX3-218ENST00000546298 AGRNO00468 2067 aa6.7□□□□□ -1.34
YBX3-218ENST00000546298 A0A087X0K7 114 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 TRAV8-2A0A0B4J237 113 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 C7orf66A4D0T2 115 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 C5orf51A6NDU8 294 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 FAM25EA8MYX2 175 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 PLA2G10O15496 165 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 CCNKO75909 580 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 MBPP02686 304 aaPredicted RBP6.69□□□□□ -1.34
YBX3-218ENST00000546298 CXCL2P19875 107 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 CXCL3P19876 107 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 PVALBP20472 110 aaPredicted RBP6.69□□□□□ -1.34
YBX3-218ENST00000546298 BCAP31P51572 246 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 RHOBP62745 196 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 HIST1H1AQ02539 215 aaPredicted RBP6.69□□□□□ -1.34
YBX3-218ENST00000546298 SLC38A11Q08AI6 406 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 PSG3Q16557 428 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 GSG1LQ6UXU4 331 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 POM121L12Q8N7R1 296 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 OR11H7Q8NGC8 314 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 ZNF431Q8TF32 576 aaPredicted RBP6.69□□□□□ -1.34
YBX3-218ENST00000546298 UHRF2Q96PU4 802 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 CCDC32Q9BV29 185 aa6.69□□□□□ -1.34
YBX3-218ENST00000546298 TRAV6A0A075B6T7 132 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 BOLA2-SMG1P6H3BVE0 249 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 AGPAT2O15120 278 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 COX7A2P2O60397 106 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 CAV2P51636 162 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 DAD1P61803 113 aa6.68□□□□□ -1.34
YBX3-218ENST00000546298 SPINK13Q1W4C9 94 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms