RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 NRN1Q9NPD7 142 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 KCNIP2Q9NS61 270 aa15.49■□□□□ 0.07
SCARB1-211ENST00000546215 GCSAMLQ5JQS6 135 aa15.48■□□□□ 0.07
SCARB1-211ENST00000546215 MORN5Q5VZ52 161 aa15.48■□□□□ 0.07
SCARB1-211ENST00000546215 FAM24BQ8N5W8 94 aa15.48■□□□□ 0.07
SCARB1-211ENST00000546215 DEFB125Q8N687 156 aa15.48■□□□□ 0.07
SCARB1-211ENST00000546215 GPR82Q96P67 336 aa15.48■□□□□ 0.07
SCARB1-211ENST00000546215 UBQLN2Q9UHD9 624 aa15.48■□□□□ 0.07
SCARB1-211ENST00000546215 A8MZ25 164 aa15.47■□□□□ 0.07
SCARB1-211ENST00000546215 GATAD1Q8WUU5 269 aa15.47■□□□□ 0.07
SCARB1-211ENST00000546215 C17orf77Q96MU5 243 aa15.47■□□□□ 0.07
SCARB1-211ENST00000546215 RFNGQ9Y644 331 aa15.47■□□□□ 0.07
SCARB1-211ENST00000546215 DNAH9Q9NYC9 4486 aa15.47■□□□□ 0.07
SCARB1-211ENST00000546215 GALR1P47211 349 aa15.46■□□□□ 0.07
SCARB1-211ENST00000546215 MAP6D1Q9H9H5 199 aa15.45■□□□□ 0.06
SCARB1-211ENST00000546215 RNF24Q9Y225 148 aa15.45■□□□□ 0.06
SCARB1-211ENST00000546215 MRPS12O15235 138 aaKnown RBP15.45■□□□□ 0.06
SCARB1-211ENST00000546215 RPL7P18124 248 aaKnown RBP15.45■□□□□ 0.06
SCARB1-211ENST00000546215 CMC4P56277 68 aaPredicted RBP15.45■□□□□ 0.06
SCARB1-211ENST00000546215 ZNF345Q14585 488 aa15.45■□□□□ 0.06
SCARB1-211ENST00000546215 RPL7L1Q6DKI1 246 aaKnown RBP15.45■□□□□ 0.06
SCARB1-211ENST00000546215 AKAP14Q86UN6 197 aa15.45■□□□□ 0.06
SCARB1-211ENST00000546215 CITED4Q96RK1 184 aa15.45■□□□□ 0.06
SCARB1-211ENST00000546215 TIMM9Q9Y5J7 89 aa15.45■□□□□ 0.06
SCARB1-211ENST00000546215 FRMD6-AS1P0C7T7 363 aa15.44■□□□□ 0.06
SCARB1-211ENST00000546215 FFAR4Q5NUL3 377 aa15.44■□□□□ 0.06
SCARB1-211ENST00000546215 KCNRGQ8N5I3 272 aa15.44■□□□□ 0.06
SCARB1-211ENST00000546215 HSD17B11Q8NBQ5 300 aa15.44■□□□□ 0.06
SCARB1-211ENST00000546215 TUBA4BQ9H853 241 aa15.44■□□□□ 0.06
SCARB1-211ENST00000546215 TRAV5A0A0B4J249 113 aa15.43■□□□□ 0.06
SCARB1-211ENST00000546215 SOCS3O14543 225 aa15.43■□□□□ 0.06
SCARB1-211ENST00000546215 TAAR5O14804 337 aa15.43■□□□□ 0.06
SCARB1-211ENST00000546215 CXCL2P19875 107 aa15.43■□□□□ 0.06
SCARB1-211ENST00000546215 APRG1Q8IVJ8 170 aa15.43■□□□□ 0.06
SCARB1-211ENST00000546215 SRD5A3Q9H8P0 318 aa15.43■□□□□ 0.06
SCARB1-211ENST00000546215 SEPSECSQ9HD40 501 aaKnown RBP15.43■□□□□ 0.06
SCARB1-211ENST00000546215 CYTL1Q9NRR1 136 aa15.43■□□□□ 0.06
SCARB1-211ENST00000546215 ZNF688P0C7X2 276 aa15.42■□□□□ 0.06
SCARB1-211ENST00000546215 ATP6V0CP27449 155 aa15.42■□□□□ 0.06
SCARB1-211ENST00000546215 DEFB131AP59861 70 aa15.42■□□□□ 0.06
SCARB1-211ENST00000546215 FAM78BQ5VT40 261 aa15.42■□□□□ 0.06
SCARB1-211ENST00000546215 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.42■□□□□ 0.06
SCARB1-211ENST00000546215 BORCS7-ASMTA0A0B4J1R7 106 aa15.41■□□□□ 0.06
SCARB1-211ENST00000546215 C1QBP02746 253 aa15.41■□□□□ 0.06
SCARB1-211ENST00000546215 CD300CQ08708 224 aa15.41■□□□□ 0.06
SCARB1-211ENST00000546215 ZNF124Q15973 351 aa15.41■□□□□ 0.06
SCARB1-211ENST00000546215 BPIFA4PQ86YQ2 179 aa15.41■□□□□ 0.06
SCARB1-211ENST00000546215 A0A087X0K7 114 aa15.41■□□□□ 0.06
SCARB1-211ENST00000546215 A0A0D9SG52 128 aa15.41■□□□□ 0.06
SCARB1-211ENST00000546215 RBMY1BA6NDE4 496 aaKnown RBP15.41■□□□□ 0.06
SCARB1-211ENST00000546215 RBMY1EA6NEQ0 496 aaKnown RBP15.41■□□□□ 0.06
SCARB1-211ENST00000546215 JTBO76095 146 aa15.41■□□□□ 0.06
SCARB1-211ENST00000546215 RBMY1DP0C7P1 496 aaKnown RBP15.41■□□□□ 0.06
SCARB1-211ENST00000546215 MEOX2P50222 304 aa15.41■□□□□ 0.06
SCARB1-211ENST00000546215 SPATA31B1PQ5VZV4 182 aa15.41■□□□□ 0.06
SCARB1-211ENST00000546215 LINC00322Q6ZN03 302 aaPredicted RBP15.41■□□□□ 0.06
SCARB1-211ENST00000546215 B9D2Q9BPU9 175 aa15.41■□□□□ 0.06
SCARB1-211ENST00000546215 PSMG3Q9BT73 122 aaPredicted RBP15.41■□□□□ 0.06
SCARB1-211ENST00000546215 ATF4P18848 351 aaPredicted RBP15.4■□□□□ 0.06
SCARB1-211ENST00000546215 SNRPD3P62318 126 aaKnown RBP15.4■□□□□ 0.06
SCARB1-211ENST00000546215 MIR17HGQ75NE6 70 aa15.4■□□□□ 0.06
SCARB1-211ENST00000546215 OR2G3Q8NGZ4 309 aa15.4■□□□□ 0.06
SCARB1-211ENST00000546215 ARPC5LQ9BPX5 153 aa15.4■□□□□ 0.06
SCARB1-211ENST00000546215 COL7A1Q02388 2944 aa15.39■□□□□ 0.05
SCARB1-211ENST00000546215 ISLRO14498 428 aa15.39■□□□□ 0.05
SCARB1-211ENST00000546215 PSMG4Q5JS54 123 aa15.39■□□□□ 0.05
SCARB1-211ENST00000546215 SAMD13Q5VXD3 122 aa15.39■□□□□ 0.05
SCARB1-211ENST00000546215 MRPL32Q9BYC8 188 aaKnown RBP15.39■□□□□ 0.05
SCARB1-211ENST00000546215 SH3BGRL3Q9H299 93 aa15.39■□□□□ 0.05
SCARB1-211ENST00000546215 IGLC2P0DOY2 106 aa15.38■□□□□ 0.05
SCARB1-211ENST00000546215 M6PRP20645 277 aa15.38■□□□□ 0.05
SCARB1-211ENST00000546215 ID1P41134 155 aa15.38■□□□□ 0.05
SCARB1-211ENST00000546215 PSMB3P49720 205 aa15.38■□□□□ 0.05
SCARB1-211ENST00000546215 SERF2P84101 59 aa15.38■□□□□ 0.05
SCARB1-211ENST00000546215 ACOT6Q3I5F7 207 aaPredicted RBP15.38■□□□□ 0.05
SCARB1-211ENST00000546215 GNPNAT1Q96EK6 184 aaPredicted RBP15.38■□□□□ 0.05
SCARB1-211ENST00000546215 FAM167A-AS1Q96KT0 104 aa15.38■□□□□ 0.05
SCARB1-211ENST00000546215 FUT9Q9Y231 359 aa15.38■□□□□ 0.05
SCARB1-211ENST00000546215 TGP01266 2768 aa15.38■□□□□ 0.05
SCARB1-211ENST00000546215 SNRPCP09234 159 aaKnown RBP15.37■□□□□ 0.05
SCARB1-211ENST00000546215 SBSPONQ8IVN8 264 aa15.37■□□□□ 0.05
SCARB1-211ENST00000546215 C16orf92Q96LL3 132 aa15.37■□□□□ 0.05
SCARB1-211ENST00000546215 SLC25A2Q9BXI2 301 aa15.37■□□□□ 0.05
SCARB1-211ENST00000546215 HRH4Q9H3N8 390 aa15.37■□□□□ 0.05
SCARB1-211ENST00000546215 TMEM14CQ9P0S9 112 aa15.37■□□□□ 0.05
SCARB1-211ENST00000546215 AGRNO00468 2067 aa15.37■□□□□ 0.05
SCARB1-211ENST00000546215 H3BQ15 152 aa15.36■□□□□ 0.05
SCARB1-211ENST00000546215 RAB2AP61019 212 aa15.36■□□□□ 0.05
SCARB1-211ENST00000546215 LGALSLQ3ZCW2 172 aaPredicted RBP15.36■□□□□ 0.05
SCARB1-211ENST00000546215 TMUB2Q71RG4 321 aa15.36■□□□□ 0.05
SCARB1-211ENST00000546215 HYLS1Q96M11 299 aa15.36■□□□□ 0.05
SCARB1-211ENST00000546215 TRAV8-2A0A0B4J237 113 aa15.36■□□□□ 0.05
SCARB1-211ENST00000546215 BCL2L11O43521 198 aa15.36■□□□□ 0.05
SCARB1-211ENST00000546215 RHOBP62745 196 aa15.36■□□□□ 0.05
SCARB1-211ENST00000546215 C20orf173Q96LM9 149 aa15.36■□□□□ 0.05
SCARB1-211ENST00000546215 LINC00052Q96N35 136 aa15.36■□□□□ 0.05
SCARB1-211ENST00000546215 ASCL2Q99929 193 aa15.36■□□□□ 0.05
SCARB1-211ENST00000546215 HUWE1Q7Z6Z7 4374 aaKnown RBP15.36■□□□□ 0.05
SCARB1-211ENST00000546215 LOC102724200A0A096LPH7 203 aaPredicted RBP15.35■□□□□ 0.05
SCARB1-211ENST00000546215 KANTRA0A1W2PQU2 76 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms