RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TRAV17A0A0B4J275 112 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 A0A0G2JLM5 398 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 LOC389332A0A1B0GUA5 103 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 A1L4Q6 167 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 G3V4G9 280 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 SMAD7O15105 426 aaKnown RBP11.3□□□□□ -0.6
SRP54-202ENST00000546080 FAM106CPP0CH98 169 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 APOBEC3AP31941 199 aaPredicted RBP11.3□□□□□ -0.6
SRP54-202ENST00000546080 CCL8P80075 99 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 MRGPRG-AS1Q2M3A8 158 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 C3orf36Q3SXR2 165 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 FAM106AQ4KMX7 169 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 Q6AWC8 147 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 ZNF474Q6S9Z5 364 aaPredicted RBP11.3□□□□□ -0.6
SRP54-202ENST00000546080 SEM1Q6ZVN7 128 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 TMEM75Q8N9X5 138 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 OR9G4Q8NGQ1 327 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 NAA38Q9BRA0 125 aaKnown RBP11.3□□□□□ -0.6
SRP54-202ENST00000546080 THYN1Q9P016 225 aa11.3□□□□□ -0.6
SRP54-202ENST00000546080 ZDBF2Q9HCK1 2354 aa11.29□□□□□ -0.6
SRP54-202ENST00000546080 A0A096LNJ9 63 aa11.29□□□□□ -0.6
SRP54-202ENST00000546080 MBD3L4A6NDZ8 208 aaPredicted RBP11.29□□□□□ -0.6
SRP54-202ENST00000546080 MBD3L3A6NE82 208 aaPredicted RBP11.29□□□□□ -0.6
SRP54-202ENST00000546080 MBD3L5A6NJ08 208 aaPredicted RBP11.29□□□□□ -0.6
SRP54-202ENST00000546080 CD59P13987 128 aa11.29□□□□□ -0.6
SRP54-202ENST00000546080 MC5RP33032 325 aa11.29□□□□□ -0.6
SRP54-202ENST00000546080 LGALS7P47929 136 aa11.29□□□□□ -0.6
SRP54-202ENST00000546080 CACNG7P62955 275 aa11.29□□□□□ -0.6
SRP54-202ENST00000546080 LOXL1Q08397 574 aaPredicted RBP11.29□□□□□ -0.6
SRP54-202ENST00000546080 LINC00311Q8N616 119 aa11.29□□□□□ -0.6
SRP54-202ENST00000546080 OR2K2Q8NGT1 345 aa11.29□□□□□ -0.6
SRP54-202ENST00000546080 MBD3L2Q8NHZ7 208 aaPredicted RBP11.29□□□□□ -0.6
SRP54-202ENST00000546080 ASCL2Q99929 193 aa11.29□□□□□ -0.6
SRP54-202ENST00000546080 SELENOKQ9Y6D0 94 aa11.29□□□□□ -0.6
SRP54-202ENST00000546080 IGHV3-72A0A0B4J1Y9 119 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 SERTM2A0A1B0GWG4 89 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 ZNF785A8K8V0 405 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 K7EQM0 130 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 TCTAP57738 103 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 SIGLEC8Q9NYZ4 499 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 NAV3Q8IVL0 2385 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 D6R8Y8 96 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 NKX2-8O15522 239 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 RAB37Q96AX2 223 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 PSG8Q9UQ74 426 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 CUL9Q8IWT3 2517 aa11.28□□□□□ -0.6
SRP54-202ENST00000546080 SIVA1O15304 175 aa11.27□□□□□ -0.6
SRP54-202ENST00000546080 C8orf31Q8N9H6 132 aa11.27□□□□□ -0.6
SRP54-202ENST00000546080 OR4X2Q8NGF9 303 aa11.27□□□□□ -0.6
SRP54-202ENST00000546080 JKAMPQ9P055 326 aa11.27□□□□□ -0.6
SRP54-202ENST00000546080 CACNA1GO43497 2377 aa11.27□□□□□ -0.6
SRP54-202ENST00000546080 INTS1Q8N201 2190 aaKnown RBP11.27□□□□□ -0.61
SRP54-202ENST00000546080 FCN3O75636 299 aa11.27□□□□□ -0.61
SRP54-202ENST00000546080 WT1P19544 449 aaPredicted RBP11.27□□□□□ -0.61
SRP54-202ENST00000546080 ZNF493Q6ZR52 646 aa11.27□□□□□ -0.61
SRP54-202ENST00000546080 PRELID3AQ96N28 172 aa11.27□□□□□ -0.61
SRP54-202ENST00000546080 COL25A1Q9BXS0 654 aaPredicted RBP11.27□□□□□ -0.61
SRP54-202ENST00000546080 NGBQ9NPG2 151 aa11.27□□□□□ -0.61
SRP54-202ENST00000546080 F11RQ9Y624 299 aaKnown RBP11.27□□□□□ -0.61
SRP54-202ENST00000546080 HBDP02042 147 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 PSG3Q16557 428 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 ADAMTSL5Q6ZMM2 481 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 NEGR1Q7Z3B1 354 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 OR5A1Q8NGJ0 315 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 ZNF414Q96IQ9 312 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 RASL11BQ9BPW5 248 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 SCNM1Q9BWG6 230 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 TECTAO75443 2155 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 TRBV19A0A075B6N1 114 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 A0A1W2PPM0 123 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 RBP4P02753 201 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 NMUP48645 174 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 CRIP1P50238 77 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 TMEM190Q8WZ59 177 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 SPCS1Q9Y6A9 102 aa11.26□□□□□ -0.61
SRP54-202ENST00000546080 NDUFB3O43676 98 aa11.25□□□□□ -0.61
SRP54-202ENST00000546080 CT45A10P0DMU9 189 aa11.25□□□□□ -0.61
SRP54-202ENST00000546080 PRB4P10163 310 aaPredicted RBP11.25□□□□□ -0.61
SRP54-202ENST00000546080 CNTFRP26992 372 aa11.25□□□□□ -0.61
SRP54-202ENST00000546080 SRSF6Q13247 344 aaKnown RBP11.25□□□□□ -0.61
SRP54-202ENST00000546080 IGFL2Q6UWQ7 119 aa11.25□□□□□ -0.61
SRP54-202ENST00000546080 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
SRP54-202ENST00000546080 C17orf77Q96MU5 243 aa11.25□□□□□ -0.61
SRP54-202ENST00000546080 ARFGEF3Q5TH69 2177 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 PPIAL4EA0A075B759 164 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 PPIAL4FP0DN26 164 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 CD40P25942 277 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 FXYD7P58549 80 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 FAM104BQ5XKR9 115 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 IFI27L1Q96BM0 104 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 TMEM133Q9H2Q1 129 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 U3KQK5 164 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 TMEM213A2RRL7 107 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 RBPJQ06330 500 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 LYZL1Q6UWQ5 148 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 SIGLEC15Q6ZMC9 328 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 WFDC8Q8IUA0 241 aa11.24□□□□□ -0.61
SRP54-202ENST00000546080 INSIG2Q9Y5U4 225 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms