RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 CCL25O15444 150 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 SLC25A17O43808 307 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 CA1P00915 261 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-225ENST00000545920 APOHP02749 345 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-225ENST00000545920 IGLC1P0CG04 106 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 COX8AP10176 69 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 ORM2P19652 201 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 HTR1DP28221 377 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 HINT1P49773 126 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-225ENST00000545920 HOXA4Q00056 320 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-225ENST00000545920 MLANAQ16655 118 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 LGALS9BQ3B8N2 356 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 SPRNQ5BIV9 151 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 BVES-AS1Q5T3Y7 98 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 LGALS9CQ6DKI2 356 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 PRR27Q6MZM9 219 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 FA2HQ7L5A8 372 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 GTSF1Q8WW33 167 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 FAM122AQ96E09 287 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 URB1-AS1Q96HZ7 61 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 LINC00479Q96M42 142 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 RASL11BQ9BPW5 248 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 SLC25A39Q9BZJ4 359 aaPredicted RBP5.14□□□□□ -1.59
SNHG1-225ENST00000545920 U3KQK5 164 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 HCFC1P51610 2035 aa5.14□□□□□ -1.59
SNHG1-225ENST00000545920 TRBV19A0A075B6N1 114 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 A6NDN8 102 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 SH2D7A6NKC9 451 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-225ENST00000545920 B9A039 149 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 H3BRN7 92 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 K7ERU9 68 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 PRRG2O14669 202 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 IGLV1-47P01700 117 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 LOXP28300 417 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-225ENST00000545920 TFPI2P48307 235 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 RAB9AP51151 201 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 PSG9Q00887 426 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 PSG3Q16557 428 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 MRGPRG-AS1Q2M3A8 158 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 DEFB109BQ30KR1 87 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 FAM201AQ5SY85 155 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 UTF1Q5T230 341 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 LCN12Q6JVE5 192 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 DUX4L9Q6RFH8 374 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-225ENST00000545920 ZNF841Q6ZN19 808 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 GTF2H5Q6ZYL4 71 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 TCF24Q7RTU0 167 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 SMIM15Q7Z3B0 74 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 PPP1R27Q86WC6 154 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 OR4X2Q8NGF9 303 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 NEU4Q8WWR8 484 aaPredicted RBP5.13□□□□□ -1.59
SNHG1-225ENST00000545920 CFHR4Q92496 578 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 PGLYRP4Q96LB8 373 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 DOCK7Q96N67 2140 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 AAMDCQ9H7C9 122 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 RALYQ9UKM9 306 aaKnown RBP5.13□□□□□ -1.59
SNHG1-225ENST00000545920 INSIG2Q9Y5U4 225 aa5.13□□□□□ -1.59
SNHG1-225ENST00000545920 LAMA2P24043 3122 aaKnown RBP5.12□□□□□ -1.59
SNHG1-225ENST00000545920 LINC01546A6NGU7 62 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 OOSP1A8MZH6 123 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 VWC2LB2RUY7 222 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 TEX22C9J3V5 150 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 E7EUB6 86 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 I3L2K1 104 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 NUDT3O95989 172 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 IGLV2-11P01706 119 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 PSG1P11464 419 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 HLA-DRB4P13762 266 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 CCL3L1P16619 93 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 FCGR2BP31994 310 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-225ENST00000545920 GPR183P32249 361 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 BMI1P35226 326 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 GPR6P46095 362 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-225ENST00000545920 PCP4P48539 62 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 RBX1P62877 108 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 GNG5P63218 68 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 CCL8P80075 99 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 SSBP2P81877 361 aaPredicted RBP5.12□□□□□ -1.59
SNHG1-225ENST00000545920 COTL1Q14019 142 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 VAMP3Q15836 100 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 UNQ5815/PRO19632Q6UWF5 114 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 BLNKQ8WV28 456 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 RNASE6Q93091 150 aaKnown RBP5.12□□□□□ -1.59
SNHG1-225ENST00000545920 SPATA25Q9BR10 227 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 ZNF747Q9BV97 191 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 RABAC1Q9UI14 185 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 HLA-DRB4X5D2U9 266 aa5.12□□□□□ -1.59
SNHG1-225ENST00000545920 TET2Q6N021 2002 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-225ENST00000545920 PKD1L2Q7Z442 2459 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 IGHV1-3A0A0C4DH29 117 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 WI2-2373I1.2A0A1W2PRP0 233 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 C9orf118A6NHY6 69 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 NPIPB5A8MRT5 1133 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 B5MCH6 92 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 H3BRM9 83 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 BUB1B-PAK6H3BSN5 160 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 TAX1BP3O14907 124 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 ENSAO43768 121 aaKnown RBP5.11□□□□□ -1.59
SNHG1-225ENST00000545920 RPL7P18124 248 aaKnown RBP5.11□□□□□ -1.59
SNHG1-225ENST00000545920 WT1P19544 449 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms