RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 NPBQ8NG41 125 aa18.46■□□□□ 0.55
FOXA1-202ENST00000545425 TIMD4Q96H15 378 aa18.46■□□□□ 0.55
FOXA1-202ENST00000545425 PAM16Q9Y3D7 125 aa18.46■□□□□ 0.55
FOXA1-202ENST00000545425 K7EQM0 130 aa18.46■□□□□ 0.55
FOXA1-202ENST00000545425 HTR1DP28221 377 aa18.46■□□□□ 0.55
FOXA1-202ENST00000545425 CTRLP40313 264 aa18.46■□□□□ 0.55
FOXA1-202ENST00000545425 PLGLAQ15195 96 aa18.46■□□□□ 0.55
FOXA1-202ENST00000545425 FBXL15Q9H469 300 aa18.46■□□□□ 0.55
FOXA1-202ENST00000545425 LYZP61626 148 aa18.45■□□□□ 0.54
FOXA1-202ENST00000545425 HIST2H2BCQ6DN03 193 aa18.45■□□□□ 0.54
FOXA1-202ENST00000545425 Q86TA4 180 aa18.45■□□□□ 0.54
FOXA1-202ENST00000545425 BPIFA4PQ86YQ2 179 aa18.45■□□□□ 0.54
FOXA1-202ENST00000545425 CHCHD1Q96BP2 118 aaKnown RBP18.45■□□□□ 0.54
FOXA1-202ENST00000545425 SHANK2-AS3Q9BTD1 123 aa18.45■□□□□ 0.54
FOXA1-202ENST00000545425 DPM3Q9P2X0 92 aa18.45■□□□□ 0.54
FOXA1-202ENST00000545425 UQCR10Q9UDW1 63 aa18.45■□□□□ 0.54
FOXA1-202ENST00000545425 ZFP30Q9Y2G7 519 aa18.45■□□□□ 0.54
FOXA1-202ENST00000545425 NDUFA3O95167 84 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 C3orf79P0CE67 100 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 TMEM75Q8N9X5 138 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 OR4F17Q8NGA8 305 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 WNT10AQ9GZT5 417 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 ARFGEF3Q5TH69 2177 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 A0A1B0GW15 77 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 RPLP1P05386 114 aaKnown RBP18.44■□□□□ 0.54
FOXA1-202ENST00000545425 CD33P20138 364 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 COL8A1P27658 744 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 FOXA3P55318 350 aaPredicted RBP18.44■□□□□ 0.54
FOXA1-202ENST00000545425 GDF5OSQ5U4N7 250 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 C16orf54Q6UWD8 224 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 ARL6IP6Q8N6S5 226 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 C1RLQ9NZP8 487 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 UNC79Q9P2D8 2635 aa18.44■□□□□ 0.54
FOXA1-202ENST00000545425 CYSRT1A8MQ03 144 aa18.43■□□□□ 0.54
FOXA1-202ENST00000545425 OOSP1A8MZH6 123 aa18.43■□□□□ 0.54
FOXA1-202ENST00000545425 NBR2O15453 112 aa18.43■□□□□ 0.54
FOXA1-202ENST00000545425 COX7A1P24310 79 aa18.43■□□□□ 0.54
FOXA1-202ENST00000545425 MAST4O15021 2626 aa18.43■□□□□ 0.54
FOXA1-202ENST00000545425 SERTM2A0A1B0GWG4 89 aa18.42■□□□□ 0.54
FOXA1-202ENST00000545425 H3BRN7 92 aa18.42■□□□□ 0.54
FOXA1-202ENST00000545425 CNIH1O95406 144 aa18.42■□□□□ 0.54
FOXA1-202ENST00000545425 NEU4Q8WWR8 484 aaPredicted RBP18.42■□□□□ 0.54
FOXA1-202ENST00000545425 RUSC1-AS1Q66K80 236 aa18.42■□□□□ 0.54
FOXA1-202ENST00000545425 Q6AWC8 147 aa18.42■□□□□ 0.54
FOXA1-202ENST00000545425 C1orf122Q6ZSJ8 110 aa18.42■□□□□ 0.54
FOXA1-202ENST00000545425 SCGB2A1O75556 95 aa18.41■□□□□ 0.54
FOXA1-202ENST00000545425 IGKV1-17P01599 117 aa18.41■□□□□ 0.54
FOXA1-202ENST00000545425 S100A7P31151 101 aa18.41■□□□□ 0.54
FOXA1-202ENST00000545425 PDE6HQ13956 83 aa18.41■□□□□ 0.54
FOXA1-202ENST00000545425 SPATA45Q537H7 98 aa18.41■□□□□ 0.54
FOXA1-202ENST00000545425 NDFIP1Q9BT67 221 aa18.41■□□□□ 0.54
FOXA1-202ENST00000545425 TRBV19A0A075B6N1 114 aa18.4■□□□□ 0.54
FOXA1-202ENST00000545425 FBLL1A6NHQ2 334 aaKnown RBP18.4■□□□□ 0.54
FOXA1-202ENST00000545425 K7EIM0 57 aa18.4■□□□□ 0.54
FOXA1-202ENST00000545425 HAX1O00165 279 aa18.4■□□□□ 0.54
FOXA1-202ENST00000545425 TDRG1Q3Y452 100 aa18.4■□□□□ 0.54
FOXA1-202ENST00000545425 CCDC144NLQ6NUI1 221 aa18.4■□□□□ 0.54
FOXA1-202ENST00000545425 ONECUT1Q9UBC0 465 aa18.4■□□□□ 0.54
FOXA1-202ENST00000545425 NPIPB5A8MRT5 1133 aa18.39■□□□□ 0.54
FOXA1-202ENST00000545425 M0R2Z0 102 aa18.39■□□□□ 0.54
FOXA1-202ENST00000545425 TIMM23O14925 209 aa18.39■□□□□ 0.54
FOXA1-202ENST00000545425 BTF3P20290 206 aaKnown RBP18.39■□□□□ 0.54
FOXA1-202ENST00000545425 GPR6P46095 362 aaPredicted RBP18.39■□□□□ 0.54
FOXA1-202ENST00000545425 GATD1Q8NB37 220 aa18.39■□□□□ 0.54
FOXA1-202ENST00000545425 IGFBPL1Q8WX77 278 aa18.39■□□□□ 0.54
FOXA1-202ENST00000545425 RPH3ALQ9UNE2 315 aa18.39■□□□□ 0.54
FOXA1-202ENST00000545425 NAV2Q8IVL1 2488 aa18.39■□□□□ 0.53
FOXA1-202ENST00000545425 NAV3Q8IVL0 2385 aa18.39■□□□□ 0.53
FOXA1-202ENST00000545425 FAM181BA6NEQ2 426 aa18.39■□□□□ 0.53
FOXA1-202ENST00000545425 OR5AL1P0C617 328 aa18.39■□□□□ 0.53
FOXA1-202ENST00000545425 NTF3P20783 257 aa18.39■□□□□ 0.53
FOXA1-202ENST00000545425 CAMPP49913 170 aa18.39■□□□□ 0.53
FOXA1-202ENST00000545425 KIR3DL3Q8N743 410 aa18.39■□□□□ 0.53
FOXA1-202ENST00000545425 CFHR4Q92496 578 aa18.39■□□□□ 0.53
FOXA1-202ENST00000545425 RNF114Q9Y508 228 aa18.39■□□□□ 0.53
FOXA1-202ENST00000545425 ODF3BA8MYP8 253 aa18.38■□□□□ 0.53
FOXA1-202ENST00000545425 PRTN3P24158 256 aa18.38■□□□□ 0.53
FOXA1-202ENST00000545425 LINC01560Q8TB33 94 aa18.38■□□□□ 0.53
FOXA1-202ENST00000545425 WI2-2373I1.2A0A1W2PRP0 233 aa18.37■□□□□ 0.53
FOXA1-202ENST00000545425 IGLC2P0DOY2 106 aa18.37■□□□□ 0.53
FOXA1-202ENST00000545425 TCF24Q7RTU0 167 aa18.37■□□□□ 0.53
FOXA1-202ENST00000545425 GTSF1Q8WW33 167 aa18.37■□□□□ 0.53
FOXA1-202ENST00000545425 PCNX1Q96RV3 2341 aa18.37■□□□□ 0.53
FOXA1-202ENST00000545425 VWC2LB2RUY7 222 aa18.37■□□□□ 0.53
FOXA1-202ENST00000545425 IGLV2-11P01706 119 aa18.37■□□□□ 0.53
FOXA1-202ENST00000545425 IGLC3P0DOY3 106 aa18.37■□□□□ 0.53
FOXA1-202ENST00000545425 GAGE1Q13065 139 aa18.37■□□□□ 0.53
FOXA1-202ENST00000545425 OR2D3Q8NGH3 330 aa18.37■□□□□ 0.53
FOXA1-202ENST00000545425 RNF125Q96EQ8 232 aa18.37■□□□□ 0.53
FOXA1-202ENST00000545425 NOTCH2Q04721 2471 aa18.36■□□□□ 0.53
FOXA1-202ENST00000545425 CENPEQ02224 2701 aa18.36■□□□□ 0.53
FOXA1-202ENST00000545425 LYNX1G3V0Z9 82 aa18.36■□□□□ 0.53
FOXA1-202ENST00000545425 LYNX1P0DP58 116 aa18.36■□□□□ 0.53
FOXA1-202ENST00000545425 COL5A1-AS1Q5SY13 56 aa18.36■□□□□ 0.53
FOXA1-202ENST00000545425 RNASEKQ6P5S7 137 aaKnown RBP18.36■□□□□ 0.53
FOXA1-202ENST00000545425 LINC00322Q6ZN03 302 aaPredicted RBP18.36■□□□□ 0.53
FOXA1-202ENST00000545425 IGHV3-21A0A0B4J1V1 117 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 CHEK1O14757 476 aa18.35■□□□□ 0.53
FOXA1-202ENST00000545425 GRNP28799 593 aaKnown RBP18.35■□□□□ 0.53
FOXA1-202ENST00000545425 MFAP4P55083 255 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms