RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 C11orf94C9JXX5 98 aa12.22□□□□□ -0.45
XRCC1-202ENST00000543982 TMEM250H0YL14 139 aa12.22□□□□□ -0.45
XRCC1-202ENST00000543982 EDN2P20800 178 aa12.22□□□□□ -0.45
XRCC1-202ENST00000543982 CDX1P47902 265 aaPredicted RBP12.22□□□□□ -0.45
XRCC1-202ENST00000543982 UBE2G2P60604 165 aa12.22□□□□□ -0.45
XRCC1-202ENST00000543982 KHDC1LQ5JSQ8 128 aa12.22□□□□□ -0.45
XRCC1-202ENST00000543982 ZNF600Q6ZNG1 722 aa12.22□□□□□ -0.45
XRCC1-202ENST00000543982 ATP6V0BQ99437 205 aa12.22□□□□□ -0.45
XRCC1-202ENST00000543982 TXNDC17Q9BRA2 123 aa12.22□□□□□ -0.45
XRCC1-202ENST00000543982 APOHP02749 345 aaPredicted RBP12.21□□□□□ -0.45
XRCC1-202ENST00000543982 KRTAP24-1Q3LI83 254 aa12.21□□□□□ -0.45
XRCC1-202ENST00000543982 SUN5Q8TC36 379 aa12.21□□□□□ -0.45
XRCC1-202ENST00000543982 OR4F4Q96R69 305 aa12.21□□□□□ -0.45
XRCC1-202ENST00000543982 NKX6-2Q9C056 277 aaPredicted RBP12.21□□□□□ -0.45
XRCC1-202ENST00000543982 GAR1Q9NY12 217 aaKnown RBP12.21□□□□□ -0.45
XRCC1-202ENST00000543982 ADARB2-AS1A8MUL3 147 aa12.21□□□□□ -0.46
XRCC1-202ENST00000543982 SNRPCP09234 159 aaKnown RBP12.21□□□□□ -0.46
XRCC1-202ENST00000543982 CST9LP1Q5W188 147 aa12.21□□□□□ -0.46
XRCC1-202ENST00000543982 FAM90A2PQ658T7 463 aa12.21□□□□□ -0.46
XRCC1-202ENST00000543982 STXBP6Q8NFX7 210 aa12.21□□□□□ -0.46
XRCC1-202ENST00000543982 HIGD1AQ9Y241 93 aa12.21□□□□□ -0.46
XRCC1-202ENST00000543982 ARL2-SNX15V9GYD0 113 aa12.21□□□□□ -0.46
XRCC1-202ENST00000543982 IGHV3-49A0A0A0MS15 119 aa12.2□□□□□ -0.46
XRCC1-202ENST00000543982 PDE6DO43924 150 aa12.2□□□□□ -0.46
XRCC1-202ENST00000543982 C8orf86Q6ZUL3 223 aa12.2□□□□□ -0.46
XRCC1-202ENST00000543982 IGHV3OR16-13A0A075B7E8 117 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 IGHV3-74A0A0B4J1X5 117 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 FAM74A7A6NL05 159 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 GGCTO75223 188 aaKnown RBP12.19□□□□□ -0.46
XRCC1-202ENST00000543982 OR10J4P0C629 311 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 CLRN3Q8NCR9 226 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 KLHL30-AS1Q8NEE0 82 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 SLC25A39Q9BZJ4 359 aaPredicted RBP12.19□□□□□ -0.46
XRCC1-202ENST00000543982 OR51M1Q9H341 326 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 YTHDF2Q9Y5A9 579 aaKnown RBP12.19□□□□□ -0.46
XRCC1-202ENST00000543982 IGHV3-66A0A0C4DH42 116 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 ATP5G3P48201 142 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 C4orf3Q8WVX3 66 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 PAXXQ9BUH6 204 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 C20orf24Q9BUV8 137 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 SELENOKQ9Y6D0 94 aa12.19□□□□□ -0.46
XRCC1-202ENST00000543982 SLURP1P55000 103 aa12.18□□□□□ -0.46
XRCC1-202ENST00000543982 UBE2L3P68036 154 aaKnown RBP12.18□□□□□ -0.46
XRCC1-202ENST00000543982 RELQ04864 619 aaPredicted RBP12.18□□□□□ -0.46
XRCC1-202ENST00000543982 TM4SF20Q53R12 229 aa12.18□□□□□ -0.46
XRCC1-202ENST00000543982 NIPSNAP3BQ9BS92 247 aa12.18□□□□□ -0.46
XRCC1-202ENST00000543982 ZNF320A2RRD8 509 aa12.18□□□□□ -0.46
XRCC1-202ENST00000543982 H3BQ15 152 aa12.18□□□□□ -0.46
XRCC1-202ENST00000543982 H3BRN7 92 aa12.18□□□□□ -0.46
XRCC1-202ENST00000543982 PYYP10082 97 aa12.18□□□□□ -0.46
XRCC1-202ENST00000543982 HOXD3P31249 432 aaPredicted RBP12.18□□□□□ -0.46
XRCC1-202ENST00000543982 S100A7AQ86SG5 101 aa12.18□□□□□ -0.46
XRCC1-202ENST00000543982 OR11H1Q8NG94 326 aa12.18□□□□□ -0.46
XRCC1-202ENST00000543982 WFDC12Q8WWY7 111 aa12.18□□□□□ -0.46
XRCC1-202ENST00000543982 RAX2Q96IS3 184 aa12.18□□□□□ -0.46
XRCC1-202ENST00000543982 SHANK2-AS3Q9BTD1 123 aa12.18□□□□□ -0.46
XRCC1-202ENST00000543982 F6UZH7 168 aa12.17□□□□□ -0.46
XRCC1-202ENST00000543982 NDUFA4O00483 81 aa12.17□□□□□ -0.46
XRCC1-202ENST00000543982 BTN1A1Q13410 526 aa12.17□□□□□ -0.46
XRCC1-202ENST00000543982 FAM209BQ5JX69 171 aa12.17□□□□□ -0.46
XRCC1-202ENST00000543982 A0A1W2PRE2 83 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 ZNF98A6NK75 572 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 NPPCP23582 126 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 SYNJ2BPP57105 145 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 FAM74A3Q4VXF1 159 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 AWAT1Q58HT5 328 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 OR1N2Q8NGR9 330 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 TMEM190Q8WZ59 177 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 FXYD5Q96DB9 178 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 TSSC4Q9Y5U2 329 aaPredicted RBP12.16□□□□□ -0.46
XRCC1-202ENST00000543982 ZNF727A8MUV8 499 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 M0R036 132 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 NSUN5P1Q3KNT7 163 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 GPHB5Q86YW7 130 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 RPUSD4Q96CM3 377 aaKnown RBP12.16□□□□□ -0.46
XRCC1-202ENST00000543982 C17orf77Q96MU5 243 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 PARLQ9H300 379 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 U3KQE9 123 aa12.16□□□□□ -0.46
XRCC1-202ENST00000543982 H3BTX0 84 aa12.15□□□□□ -0.46
XRCC1-202ENST00000543982 GP9P14770 177 aa12.15□□□□□ -0.46
XRCC1-202ENST00000543982 KLF5Q13887 457 aaPredicted RBP12.15□□□□□ -0.46
XRCC1-202ENST00000543982 RPEL1Q2QD12 228 aa12.15□□□□□ -0.46
XRCC1-202ENST00000543982 TVP23CQ96ET8 276 aa12.15□□□□□ -0.46
XRCC1-202ENST00000543982 SMIM7Q9BQ49 75 aa12.15□□□□□ -0.46
XRCC1-202ENST00000543982 RABAC1Q9UI14 185 aa12.15□□□□□ -0.46
XRCC1-202ENST00000543982 MRPS12O15235 138 aaKnown RBP12.14□□□□□ -0.47
XRCC1-202ENST00000543982 CRYBB3P26998 211 aa12.14□□□□□ -0.47
XRCC1-202ENST00000543982 DLX4Q92988 240 aaPredicted RBP12.14□□□□□ -0.47
XRCC1-202ENST00000543982 TMEM14CQ9P0S9 112 aa12.14□□□□□ -0.47
XRCC1-202ENST00000543982 SMAD5-AS1Q9Y6J3 95 aa12.14□□□□□ -0.47
XRCC1-202ENST00000543982 WNK1Q9H4A3 2382 aa12.14□□□□□ -0.47
XRCC1-202ENST00000543982 LINC01619G3V211 115 aa12.14□□□□□ -0.47
XRCC1-202ENST00000543982 NBEAP1P0C6P0 100 aa12.14□□□□□ -0.47
XRCC1-202ENST00000543982 PNRC1Q12796 327 aaPredicted RBP12.14□□□□□ -0.47
XRCC1-202ENST00000543982 FOXL1Q12952 345 aa12.14□□□□□ -0.47
XRCC1-202ENST00000543982 RHEBQ15382 184 aa12.14□□□□□ -0.47
XRCC1-202ENST00000543982 ZNF674Q2M3X9 581 aa12.14□□□□□ -0.47
XRCC1-202ENST00000543982 ADAMTSL5Q6ZMM2 481 aa12.14□□□□□ -0.47
XRCC1-202ENST00000543982 C7orf77A4D0Y5 90 aa12.13□□□□□ -0.47
XRCC1-202ENST00000543982 GGTLC3B5MD39 225 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms