RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 INSL3P51460 131 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 FAM74A1Q5RGS3 127 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 PRR31Q5SQ13 230 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 LEMD1Q68G75 181 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 C16orf54Q6UWD8 224 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 TEX261Q6UWH6 196 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 SIGLEC15Q6ZMC9 328 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 RBPMS2Q6ZRY4 209 aaKnown RBP9.03□□□□□ -0.96
DDB1-223ENST00000543658 MIR17HGQ75NE6 70 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 TCF24Q7RTU0 167 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 IQCF2Q8IXL9 164 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 SEPSECSQ9HD40 501 aaKnown RBP9.03□□□□□ -0.96
DDB1-223ENST00000543658 RPRMQ9NS64 109 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 SIGLEC8Q9NYZ4 499 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 UBQLN2Q9UHD9 624 aa9.03□□□□□ -0.96
DDB1-223ENST00000543658 TENM1Q9UKZ4 2725 aa9.02□□□□□ -0.97
DDB1-223ENST00000543658 ZNF785A8K8V0 405 aa9.02□□□□□ -0.97
DDB1-223ENST00000543658 ZNF705EA8MWA4 302 aaPredicted RBP9.02□□□□□ -0.97
DDB1-223ENST00000543658 PAFAH1B2P68402 229 aa9.02□□□□□ -0.97
DDB1-223ENST00000543658 SPATA31B1PQ5VZV4 182 aa9.02□□□□□ -0.97
DDB1-223ENST00000543658 LCN12Q6JVE5 192 aa9.02□□□□□ -0.97
DDB1-223ENST00000543658 PQLC2Q6ZP29 291 aa9.02□□□□□ -0.97
DDB1-223ENST00000543658 RPP25LQ8N5L8 163 aaKnown RBP9.02□□□□□ -0.97
DDB1-223ENST00000543658 OR2K2Q8NGT1 345 aa9.02□□□□□ -0.97
DDB1-223ENST00000543658 LRRC20Q8TCA0 184 aa9.02□□□□□ -0.97
DDB1-223ENST00000543658 RAB24Q969Q5 203 aa9.02□□□□□ -0.97
DDB1-223ENST00000543658 PAXXQ9BUH6 204 aa9.02□□□□□ -0.97
DDB1-223ENST00000543658 MLXQ9UH92 298 aa9.02□□□□□ -0.97
DDB1-223ENST00000543658 U3KQE9 123 aa9.02□□□□□ -0.97
DDB1-223ENST00000543658 IGKV3-7A0A075B6H7 116 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 TRAV5A0A0B4J249 113 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 MAP1LC3B2A6NCE7 125 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 DNASE2O00115 360 aaPredicted RBP9.01□□□□□ -0.97
DDB1-223ENST00000543658 HMGB3O15347 200 aaKnown RBP9.01□□□□□ -0.97
DDB1-223ENST00000543658 CXorf1O96002 111 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 HBE1P02100 147 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 H2AFB1P0C5Y9 115 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 UBE2L3P68036 154 aaKnown RBP9.01□□□□□ -0.97
DDB1-223ENST00000543658 BLOC1S1P78537 153 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 LCN15Q6UWW0 184 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 GLMPQ8WWB7 406 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 SLC25A2Q9BXI2 301 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 MAP1LC3BQ9GZQ8 125 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 OR51M1Q9H341 326 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 STAB1Q9NY15 2570 aa9.01□□□□□ -0.97
DDB1-223ENST00000543658 TRAV25A0A0B4J276 109 aa9□□□□□ -0.97
DDB1-223ENST00000543658 STAG3L2P0CL84 134 aa9□□□□□ -0.97
DDB1-223ENST00000543658 STAG3L3P0CL85 134 aa9□□□□□ -0.97
DDB1-223ENST00000543658 ARL14EPLP0DKL9 152 aa9□□□□□ -0.97
DDB1-223ENST00000543658 IGLL1P15814 213 aa9□□□□□ -0.97
DDB1-223ENST00000543658 MEOX2P50222 304 aa9□□□□□ -0.97
DDB1-223ENST00000543658 RAB14P61106 215 aa9□□□□□ -0.97
DDB1-223ENST00000543658 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
DDB1-223ENST00000543658 MORN5Q5VZ52 161 aa9□□□□□ -0.97
DDB1-223ENST00000543658 IL34Q6ZMJ4 242 aa9□□□□□ -0.97
DDB1-223ENST00000543658 ZNF680Q8NEM1 530 aa9□□□□□ -0.97
DDB1-223ENST00000543658 WFDC9Q8NEX5 89 aa9□□□□□ -0.97
DDB1-223ENST00000543658 SFT2D1Q8WV19 159 aa9□□□□□ -0.97
DDB1-223ENST00000543658 TMEM14CQ9P0S9 112 aa9□□□□□ -0.97
DDB1-223ENST00000543658 SELENOKQ9Y6D0 94 aa9□□□□□ -0.97
DDB1-223ENST00000543658 OR10J4P0C629 311 aa8.99□□□□□ -0.97
DDB1-223ENST00000543658 PYYP10082 97 aa8.99□□□□□ -0.97
DDB1-223ENST00000543658 FHITP49789 147 aa8.99□□□□□ -0.97
DDB1-223ENST00000543658 FGF8P55075 233 aaPredicted RBP8.99□□□□□ -0.97
DDB1-223ENST00000543658 GUCA2BQ16661 112 aa8.99□□□□□ -0.97
DDB1-223ENST00000543658 DEFB114Q30KQ6 69 aa8.99□□□□□ -0.97
DDB1-223ENST00000543658 CD300EQ496F6 205 aaPredicted RBP8.99□□□□□ -0.97
DDB1-223ENST00000543658 SAMD13Q5VXD3 122 aa8.99□□□□□ -0.97
DDB1-223ENST00000543658 ADAMTSL5Q6ZMM2 481 aa8.99□□□□□ -0.97
DDB1-223ENST00000543658 ZNF767PQ75MW2 155 aa8.99□□□□□ -0.97
DDB1-223ENST00000543658 SAT2Q96F10 170 aaPredicted RBP8.99□□□□□ -0.97
DDB1-223ENST00000543658 NRN1Q9NPD7 142 aa8.99□□□□□ -0.97
DDB1-223ENST00000543658 TMEM167BQ9NRX6 74 aa8.99□□□□□ -0.97
DDB1-223ENST00000543658 A0A1B0GV50 99 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 OR4C46A6NHA9 309 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 EIF3GO75821 320 aaKnown RBP eCLIP8.98□□□□□ -0.97
DDB1-223ENST00000543658 IGLV1-51P01701 117 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 HIST1H1EP10412 219 aaKnown RBP8.98□□□□□ -0.97
DDB1-223ENST00000543658 GP9P14770 177 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 GCHFRP30047 84 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 TFPI2P48307 235 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 ZNF726P1Q15940 193 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 GUK1Q16774 197 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 DMRTA1Q5VZB9 504 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 SSX7Q7RTT5 188 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 WFDC3Q8IUB2 231 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 TMEM61Q8N0U2 210 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 GBGT1Q8N5D6 347 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 BLNKQ8WV28 456 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 FAM167A-AS1Q96KT0 104 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 SPAG8Q99932 426 aaPredicted RBP8.98□□□□□ -0.97
DDB1-223ENST00000543658 SLC50A1Q9BRV3 221 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 PLA2G2EQ9NZK7 142 aa8.98□□□□□ -0.97
DDB1-223ENST00000543658 ZMAT5Q9UDW3 170 aaKnown RBP8.98□□□□□ -0.97
DDB1-223ENST00000543658 A0A087X0K7 114 aa8.97□□□□□ -0.97
DDB1-223ENST00000543658 TSPAN4O14817 238 aa8.97□□□□□ -0.97
DDB1-223ENST00000543658 ID1P41134 155 aa8.97□□□□□ -0.97
DDB1-223ENST00000543658 PPT1P50897 306 aa8.97□□□□□ -0.97
DDB1-223ENST00000543658 MBD3L1Q8WWY6 194 aa8.97□□□□□ -0.97
DDB1-223ENST00000543658 C16orf92Q96LL3 132 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms