RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 RSG1Q9BU20 258 aa12.75□□□□□ -0.37
RABGGTA-203ENST00000543002 WFDC10AQ9H1F0 79 aa12.75□□□□□ -0.37
RABGGTA-203ENST00000543002 GALR1P47211 349 aa12.74□□□□□ -0.37
RABGGTA-203ENST00000543002 OR11H4Q8NGC9 324 aa12.74□□□□□ -0.37
RABGGTA-203ENST00000543002 GATAD1Q8WUU5 269 aa12.74□□□□□ -0.37
RABGGTA-203ENST00000543002 MFFQ9GZY8 342 aa12.74□□□□□ -0.37
RABGGTA-203ENST00000543002 UBQLN2Q9UHD9 624 aa12.74□□□□□ -0.37
RABGGTA-203ENST00000543002 HMSDA8MTL9 139 aa12.73□□□□□ -0.37
RABGGTA-203ENST00000543002 RPL7P18124 248 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-203ENST00000543002 TCTE3Q8IZS6 198 aa12.73□□□□□ -0.37
RABGGTA-203ENST00000543002 FAM24BQ8N5W8 94 aa12.73□□□□□ -0.37
RABGGTA-203ENST00000543002 TUBA4BQ9H853 241 aa12.73□□□□□ -0.37
RABGGTA-203ENST00000543002 MAP6D1Q9H9H5 199 aa12.73□□□□□ -0.37
RABGGTA-203ENST00000543002 FRMD6-AS1P0C7T7 363 aa12.72□□□□□ -0.37
RABGGTA-203ENST00000543002 MORN5Q5VZ52 161 aa12.72□□□□□ -0.37
RABGGTA-203ENST00000543002 SRD5A3Q9H8P0 318 aa12.72□□□□□ -0.37
RABGGTA-203ENST00000543002 SEPSECSQ9HD40 501 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-203ENST00000543002 TIMM9Q9Y5J7 89 aa12.72□□□□□ -0.37
RABGGTA-203ENST00000543002 A0A1B0GVG6 124 aa12.71□□□□□ -0.37
RABGGTA-203ENST00000543002 GCSAMLQ5JQS6 135 aa12.71□□□□□ -0.37
RABGGTA-203ENST00000543002 C17orf77Q96MU5 243 aa12.71□□□□□ -0.37
RABGGTA-203ENST00000543002 B9D2Q9BPU9 175 aa12.71□□□□□ -0.37
RABGGTA-203ENST00000543002 BORCS7-ASMTA0A0B4J1R7 106 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 SOCS3O14543 225 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 TAAR5O14804 337 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 MRPS12O15235 138 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 ZNF688P0C7X2 276 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 MEOX2P50222 304 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 DEFB131AP59861 70 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 ZNF345Q14585 488 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 FFAR4Q5NUL3 377 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 RPL7L1Q6DKI1 246 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 AKAP14Q86UN6 197 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 BPIFA4PQ86YQ2 179 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 APRG1Q8IVJ8 170 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 KCNRGQ8N5I3 272 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 HSD17B11Q8NBQ5 300 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 CITED4Q96RK1 184 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 RFNGQ9Y644 331 aa12.7□□□□□ -0.38
RABGGTA-203ENST00000543002 ATF4P18848 351 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-203ENST00000543002 SNRPD3P62318 126 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-203ENST00000543002 FAM78BQ5VT40 261 aa12.69□□□□□ -0.38
RABGGTA-203ENST00000543002 SAMD13Q5VXD3 122 aa12.69□□□□□ -0.38
RABGGTA-203ENST00000543002 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.69□□□□□ -0.38
RABGGTA-203ENST00000543002 LINC00322Q6ZN03 302 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-203ENST00000543002 A0A087X0K7 114 aa12.68□□□□□ -0.38
RABGGTA-203ENST00000543002 TRAV5A0A0B4J249 113 aa12.68□□□□□ -0.38
RABGGTA-203ENST00000543002 RBMY1BA6NDE4 496 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-203ENST00000543002 RBMY1EA6NEQ0 496 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-203ENST00000543002 RBMY1DP0C7P1 496 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-203ENST00000543002 ATP6V0CP27449 155 aa12.68□□□□□ -0.38
RABGGTA-203ENST00000543002 ID1P41134 155 aa12.68□□□□□ -0.38
RABGGTA-203ENST00000543002 PSMB3P49720 205 aa12.68□□□□□ -0.38
RABGGTA-203ENST00000543002 ZNF124Q15973 351 aa12.68□□□□□ -0.38
RABGGTA-203ENST00000543002 PSMG3Q9BT73 122 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-203ENST00000543002 A0A0D9SG52 128 aa12.67□□□□□ -0.38
RABGGTA-203ENST00000543002 ISLRO14498 428 aa12.67□□□□□ -0.38
RABGGTA-203ENST00000543002 JTBO76095 146 aa12.67□□□□□ -0.38
RABGGTA-203ENST00000543002 CXCL2P19875 107 aa12.67□□□□□ -0.38
RABGGTA-203ENST00000543002 ACOT6Q3I5F7 207 aaPredicted RBP12.67□□□□□ -0.38
RABGGTA-203ENST00000543002 PSMG4Q5JS54 123 aa12.67□□□□□ -0.38
RABGGTA-203ENST00000543002 OR2G3Q8NGZ4 309 aa12.67□□□□□ -0.38
RABGGTA-203ENST00000543002 ARPC5LQ9BPX5 153 aa12.67□□□□□ -0.38
RABGGTA-203ENST00000543002 MRPL32Q9BYC8 188 aaKnown RBP12.67□□□□□ -0.38
RABGGTA-203ENST00000543002 CYTL1Q9NRR1 136 aa12.67□□□□□ -0.38
RABGGTA-203ENST00000543002 C1QBP02746 253 aa12.66□□□□□ -0.38
RABGGTA-203ENST00000543002 M6PRP20645 277 aa12.66□□□□□ -0.38
RABGGTA-203ENST00000543002 SPATA31B1PQ5VZV4 182 aa12.66□□□□□ -0.38
RABGGTA-203ENST00000543002 MIR17HGQ75NE6 70 aa12.66□□□□□ -0.38
RABGGTA-203ENST00000543002 SBSPONQ8IVN8 264 aa12.66□□□□□ -0.38
RABGGTA-203ENST00000543002 GNPNAT1Q96EK6 184 aaPredicted RBP12.66□□□□□ -0.38
RABGGTA-203ENST00000543002 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
RABGGTA-203ENST00000543002 TMEM14CQ9P0S9 112 aa12.66□□□□□ -0.38
RABGGTA-203ENST00000543002 FUT9Q9Y231 359 aa12.66□□□□□ -0.38
RABGGTA-203ENST00000543002 PRKDCP78527 4128 aaKnown RBP12.66□□□□□ -0.38
RABGGTA-203ENST00000543002 LOC102724200A0A096LPH7 203 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-203ENST00000543002 IGLC2P0DOY2 106 aa12.65□□□□□ -0.38
RABGGTA-203ENST00000543002 SERF2P84101 59 aa12.65□□□□□ -0.38
RABGGTA-203ENST00000543002 FAM167A-AS1Q96KT0 104 aa12.65□□□□□ -0.38
RABGGTA-203ENST00000543002 ASCL2Q99929 193 aa12.65□□□□□ -0.38
RABGGTA-203ENST00000543002 HRH4Q9H3N8 390 aa12.65□□□□□ -0.38
RABGGTA-203ENST00000543002 RHOBP62745 196 aa12.64□□□□□ -0.39
RABGGTA-203ENST00000543002 HAGHQ16775 308 aa12.64□□□□□ -0.39
RABGGTA-203ENST00000543002 LINC00052Q96N35 136 aa12.64□□□□□ -0.39
RABGGTA-203ENST00000543002 SLC25A2Q9BXI2 301 aa12.64□□□□□ -0.39
RABGGTA-203ENST00000543002 SH3BGRL3Q9H299 93 aa12.64□□□□□ -0.39
RABGGTA-203ENST00000543002 TRAV8-2A0A0B4J237 113 aa12.63□□□□□ -0.39
RABGGTA-203ENST00000543002 KANTRA0A1W2PQU2 76 aa12.63□□□□□ -0.39
RABGGTA-203ENST00000543002 H3BQ15 152 aa12.63□□□□□ -0.39
RABGGTA-203ENST00000543002 BCL2L11O43521 198 aa12.63□□□□□ -0.39
RABGGTA-203ENST00000543002 RAB2AP61019 212 aa12.63□□□□□ -0.39
RABGGTA-203ENST00000543002 CD300CQ08708 224 aa12.63□□□□□ -0.39
RABGGTA-203ENST00000543002 GUK1Q16774 197 aa12.63□□□□□ -0.39
RABGGTA-203ENST00000543002 LCN15Q6UWW0 184 aa12.63□□□□□ -0.39
RABGGTA-203ENST00000543002 TMUB2Q71RG4 321 aa12.63□□□□□ -0.39
RABGGTA-203ENST00000543002 HYLS1Q96M11 299 aa12.63□□□□□ -0.39
RABGGTA-203ENST00000543002 KNCNA6PVL3 124 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 MBP02144 154 aa12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 SNRPCP09234 159 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-203ENST00000543002 NHLRC4P0CG21 123 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms