RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 C7orf71A4D174 169 aa13□□□□□ -0.33
VARS2-212ENST00000542001 NUTF2P61970 127 aaKnown RBP13□□□□□ -0.33
VARS2-212ENST00000542001 RITA1Q96K30 269 aa13□□□□□ -0.33
VARS2-212ENST00000542001 CENPEQ02224 2701 aa13□□□□□ -0.33
VARS2-212ENST00000542001 FRYQ5TBA9 3013 aa13□□□□□ -0.33
VARS2-212ENST00000542001 TRBV9A0A0B4J1U6 114 aa13□□□□□ -0.33
VARS2-212ENST00000542001 LOXP28300 417 aaPredicted RBP13□□□□□ -0.33
VARS2-212ENST00000542001 NAA38Q9BRA0 125 aaKnown RBP13□□□□□ -0.33
VARS2-212ENST00000542001 SLC25A39Q9BZJ4 359 aaPredicted RBP13□□□□□ -0.33
VARS2-212ENST00000542001 PRDM13Q9H4Q3 707 aa13□□□□□ -0.33
VARS2-212ENST00000542001 PSG8Q9UQ74 426 aa13□□□□□ -0.33
VARS2-212ENST00000542001 FAM90A9PA6NNJ1 464 aa12.99□□□□□ -0.33
VARS2-212ENST00000542001 C3orf79P0CE67 100 aa12.99□□□□□ -0.33
VARS2-212ENST00000542001 ATP5IP56385 69 aaPredicted RBP12.99□□□□□ -0.33
VARS2-212ENST00000542001 DAZAP2Q15038 168 aaPredicted RBP12.99□□□□□ -0.33
VARS2-212ENST00000542001 TMEM30BQ3MIR4 351 aa12.99□□□□□ -0.33
VARS2-212ENST00000542001 RBPMS2Q6ZRY4 209 aaKnown RBP12.99□□□□□ -0.33
VARS2-212ENST00000542001 METTL26Q96S19 204 aa12.99□□□□□ -0.33
VARS2-212ENST00000542001 E7EUB6 86 aa12.99□□□□□ -0.33
VARS2-212ENST00000542001 TRGV3P03979 118 aa12.99□□□□□ -0.33
VARS2-212ENST00000542001 EVI2AP22794 236 aa12.99□□□□□ -0.33
VARS2-212ENST00000542001 NDPQ00604 133 aa12.99□□□□□ -0.33
VARS2-212ENST00000542001 SLC25A34Q6PIV7 304 aa12.99□□□□□ -0.33
VARS2-212ENST00000542001 CTSZQ9UBR2 303 aa12.99□□□□□ -0.33
VARS2-212ENST00000542001 K7EN84 100 aa12.99□□□□□ -0.33
VARS2-212ENST00000542001 FAM74A4Q5TZK3 123 aa12.98□□□□□ -0.33
VARS2-212ENST00000542001 VKORC1Q9BQB6 163 aa12.98□□□□□ -0.33
VARS2-212ENST00000542001 PRELID3AQ96N28 172 aa12.98□□□□□ -0.33
VARS2-212ENST00000542001 LRP4O75096 1905 aa12.98□□□□□ -0.33
VARS2-212ENST00000542001 DSCAML1Q8TD84 2053 aa12.98□□□□□ -0.33
VARS2-212ENST00000542001 MTORP42345 2549 aa12.98□□□□□ -0.33
VARS2-212ENST00000542001 GCSHP23434 173 aa12.98□□□□□ -0.33
VARS2-212ENST00000542001 RHOGP84095 191 aa12.98□□□□□ -0.33
VARS2-212ENST00000542001 HIST1H1AQ02539 215 aaPredicted RBP12.98□□□□□ -0.33
VARS2-212ENST00000542001 hDV102S1A0JD36 115 aa12.98□□□□□ -0.33
VARS2-212ENST00000542001 BUB1B-PAK6H3BSN5 160 aa12.98□□□□□ -0.33
VARS2-212ENST00000542001 TCRAP04437 139 aa12.98□□□□□ -0.33
VARS2-212ENST00000542001 GNB1LQ9BYB4 327 aa12.98□□□□□ -0.33
VARS2-212ENST00000542001 REV3LO60673 3130 aa12.97□□□□□ -0.33
VARS2-212ENST00000542001 FBLN7Q53RD9 439 aa12.97□□□□□ -0.33
VARS2-212ENST00000542001 ZNF502Q8TBZ5 544 aa12.97□□□□□ -0.33
VARS2-212ENST00000542001 MIEN1Q9BRT3 115 aa12.97□□□□□ -0.33
VARS2-212ENST00000542001 SMKR1H3BMG3 65 aa12.97□□□□□ -0.33
VARS2-212ENST00000542001 CLEC2AQ6UVW9 174 aa12.97□□□□□ -0.33
VARS2-212ENST00000542001 ARL6IP6Q8N6S5 226 aa12.97□□□□□ -0.33
VARS2-212ENST00000542001 OR10AG1Q8NH19 301 aa12.97□□□□□ -0.33
VARS2-212ENST00000542001 C11orf1Q9H5F2 150 aa12.97□□□□□ -0.33
VARS2-212ENST00000542001 C1orf229Q6ZS94 237 aaPredicted RBP12.97□□□□□ -0.33
VARS2-212ENST00000542001 NDUFA4L2Q9NRX3 87 aa12.97□□□□□ -0.33
VARS2-212ENST00000542001 POLR3KQ9Y2Y1 108 aaPredicted RBP12.97□□□□□ -0.33
VARS2-212ENST00000542001 SLAQ13239 276 aa12.96□□□□□ -0.33
VARS2-212ENST00000542001 TDRG1Q3Y452 100 aa12.96□□□□□ -0.33
VARS2-212ENST00000542001 SCGB1D4Q6XE38 83 aa12.96□□□□□ -0.33
VARS2-212ENST00000542001 C8orf46Q8TAG6 207 aa12.96□□□□□ -0.33
VARS2-212ENST00000542001 TSKUQ8WUA8 353 aa12.96□□□□□ -0.33
VARS2-212ENST00000542001 IGKV1OR2-108A0A075B7D4 117 aa12.96□□□□□ -0.33
VARS2-212ENST00000542001 BMI1P35226 326 aa12.96□□□□□ -0.33
VARS2-212ENST00000542001 RCHY1Q96PM5 261 aa12.96□□□□□ -0.33
VARS2-212ENST00000542001 TMEM208Q9BTX3 173 aa12.96□□□□□ -0.33
VARS2-212ENST00000542001 PARD6GQ9BYG4 376 aaPredicted RBP12.96□□□□□ -0.33
VARS2-212ENST00000542001 LAMTOR2Q9Y2Q5 125 aa12.96□□□□□ -0.33
VARS2-212ENST00000542001 C9JCJ5 164 aa12.96□□□□□ -0.34
VARS2-212ENST00000542001 UCNP55089 124 aa12.96□□□□□ -0.34
VARS2-212ENST00000542001 TRAV8-6A0A0B4J262 113 aa12.95□□□□□ -0.34
VARS2-212ENST00000542001 Q6ZWC4 215 aa12.95□□□□□ -0.34
VARS2-212ENST00000542001 PIP4P1Q86T03 277 aa12.95□□□□□ -0.34
VARS2-212ENST00000542001 FAM71F2Q6NXP2 309 aa12.95□□□□□ -0.34
VARS2-212ENST00000542001 C17orf77Q96MU5 243 aa12.95□□□□□ -0.34
VARS2-212ENST00000542001 GPX1P07203 203 aa12.95□□□□□ -0.34
VARS2-212ENST00000542001 CEACAM8P31997 349 aaPredicted RBP12.95□□□□□ -0.34
VARS2-212ENST00000542001 DLX6P56179 175 aa12.95□□□□□ -0.34
VARS2-212ENST00000542001 C15orf32Q32M92 178 aa12.95□□□□□ -0.34
VARS2-212ENST00000542001 TMEM160Q9NX00 188 aa12.95□□□□□ -0.34
VARS2-212ENST00000542001 LINC00614P0C842 121 aa12.94□□□□□ -0.34
VARS2-212ENST00000542001 FMC1Q96HJ9 113 aa12.94□□□□□ -0.34
VARS2-212ENST00000542001 DUX5Q96PT3 197 aa12.94□□□□□ -0.34
VARS2-212ENST00000542001 TNRC6AQ8NDV7 1962 aaKnown RBP12.94□□□□□ -0.34
VARS2-212ENST00000542001 THBDP07204 575 aa12.94□□□□□ -0.34
VARS2-212ENST00000542001 ZNF329Q86UD4 541 aa12.94□□□□□ -0.34
VARS2-212ENST00000542001 TMEM155Q4W5P6 130 aa12.94□□□□□ -0.34
VARS2-212ENST00000542001 OR5AN1Q8NGI8 311 aa12.94□□□□□ -0.34
VARS2-212ENST00000542001 MRPL36Q9P0J6 103 aaKnown RBP12.94□□□□□ -0.34
VARS2-212ENST00000542001 KMT2EQ8IZD2 1858 aa12.94□□□□□ -0.34
VARS2-212ENST00000542001 TRAV30A0A087WSZ9 112 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 A8MWP6 167 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 ATP5G2Q06055 141 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 VMO1Q7Z5L0 202 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 MYOZ3Q8TDC0 251 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 SNHG12Q9BXW3 62 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 OTORQ9NRC9 128 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 PHLDA3Q9Y5J5 127 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 V9GYV3 84 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 IGHV3OR16-12A0A075B7B8 117 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 TRAV40A0A0B4J280 105 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 NPSP0C0P6 89 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 NUP37Q8NFH4 326 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 C2orf88Q9BSF0 95 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 C7orf69Q9H7B7 122 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 A0A1B0GWJ7 208 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 A0A1W2PS18 150 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms