RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 MIC13Q5XKP0 118 aa13.38□□□□□ -0.27
SNRPA1-203ENST00000540017 TMEM37Q8WXS4 190 aa13.38□□□□□ -0.27
SNRPA1-203ENST00000540017 C20orf173Q96LM9 149 aa13.38□□□□□ -0.27
SNRPA1-203ENST00000540017 LINC00052Q96N35 136 aa13.38□□□□□ -0.27
SNRPA1-203ENST00000540017 ARV1Q9H2C2 271 aa13.38□□□□□ -0.27
SNRPA1-203ENST00000540017 LYL1P12980 280 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 C4BPBP20851 252 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 PSMB3P49720 205 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 PRR20EP86478 221 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 PRR20CP86479 221 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 PRR20DP86480 221 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 PRR20BP86481 221 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 PRR20AP86496 221 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 ATP6V1FQ16864 119 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 MORN5Q5VZ52 161 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 ZFAND6Q6FIF0 208 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 GPR82Q96P67 336 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 STARD9Q9P2P6 4700 aa13.37□□□□□ -0.27
SNRPA1-203ENST00000540017 A0A0J9YWU9 116 aa13.36□□□□□ -0.27
SNRPA1-203ENST00000540017 H3BMM0 161 aa13.36□□□□□ -0.27
SNRPA1-203ENST00000540017 ISLRO14498 428 aa13.36□□□□□ -0.27
SNRPA1-203ENST00000540017 ID1P41134 155 aa13.36□□□□□ -0.27
SNRPA1-203ENST00000540017 BAXQ07812 192 aa13.36□□□□□ -0.27
SNRPA1-203ENST00000540017 PXDC1Q5TGL8 231 aa13.36□□□□□ -0.27
SNRPA1-203ENST00000540017 IGFL4Q6B9Z1 124 aa13.36□□□□□ -0.27
SNRPA1-203ENST00000540017 LINC00305Q7Z4B0 112 aa13.36□□□□□ -0.27
SNRPA1-203ENST00000540017 OR5C1Q8NGR4 320 aa13.36□□□□□ -0.27
SNRPA1-203ENST00000540017 SLC25A31Q9H0C2 315 aa13.36□□□□□ -0.27
SNRPA1-203ENST00000540017 MRPS12O15235 138 aaKnown RBP13.35□□□□□ -0.27
SNRPA1-203ENST00000540017 HLA-DRB4P13762 266 aa13.35□□□□□ -0.27
SNRPA1-203ENST00000540017 FGF7P21781 194 aa13.35□□□□□ -0.27
SNRPA1-203ENST00000540017 S100A7P31151 101 aa13.35□□□□□ -0.27
SNRPA1-203ENST00000540017 MEOX2P50222 304 aa13.35□□□□□ -0.27
SNRPA1-203ENST00000540017 RAB31Q13636 194 aa13.35□□□□□ -0.27
SNRPA1-203ENST00000540017 OPCMLQ14982 345 aa13.35□□□□□ -0.27
SNRPA1-203ENST00000540017 OR11H7Q8NGC8 314 aa13.35□□□□□ -0.27
SNRPA1-203ENST00000540017 GATAD1Q8WUU5 269 aa13.35□□□□□ -0.27
SNRPA1-203ENST00000540017 C16orf92Q96LL3 132 aa13.35□□□□□ -0.27
SNRPA1-203ENST00000540017 HLA-DRB4X5D2U9 266 aa13.35□□□□□ -0.27
SNRPA1-203ENST00000540017 CSMD3Q7Z407 3707 aa13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 TRAV8-2A0A0B4J237 113 aa13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 F6UB75 175 aa13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 COX7A2P2O60397 106 aa13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 SPP1P10451 314 aa13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 RPL7P18124 248 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 RPL29P47914 159 aaKnown RBP13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 CLINT1Q14677 625 aa13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 FCN2Q15485 313 aa13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 MORN3Q6PF18 240 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 THAP6Q8TBB0 222 aa13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 CHAC2Q8WUX2 184 aa13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 SAV1Q9H4B6 383 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 MBD2Q9UBB5 411 aa13.34□□□□□ -0.27
SNRPA1-203ENST00000540017 ATF4P18848 351 aaPredicted RBP13.33□□□□□ -0.28
SNRPA1-203ENST00000540017 FGL1Q08830 312 aa13.33□□□□□ -0.28
SNRPA1-203ENST00000540017 C10orf113Q5VZT2 155 aa13.33□□□□□ -0.28
SNRPA1-203ENST00000540017 FOXI2Q6ZQN5 318 aa13.33□□□□□ -0.28
SNRPA1-203ENST00000540017 RNF182Q8N6D2 247 aa13.33□□□□□ -0.28
SNRPA1-203ENST00000540017 OR11H2Q8NH07 326 aa13.33□□□□□ -0.28
SNRPA1-203ENST00000540017 RARRES2Q99969 163 aa13.33□□□□□ -0.28
SNRPA1-203ENST00000540017 DNAJC4Q9NNZ3 241 aa13.33□□□□□ -0.28
SNRPA1-203ENST00000540017 SLC39A9Q9NUM3 307 aa13.33□□□□□ -0.28
SNRPA1-203ENST00000540017 CLEC5AQ9NY25 188 aa13.33□□□□□ -0.28
SNRPA1-203ENST00000540017 ELOA3CA0A087WX78 387 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-203ENST00000540017 A0A087X0K7 114 aa13.32□□□□□ -0.28
SNRPA1-203ENST00000540017 TRAV5A0A0B4J249 113 aa13.32□□□□□ -0.28
SNRPA1-203ENST00000540017 IGKV3-20P01619 116 aa13.32□□□□□ -0.28
SNRPA1-203ENST00000540017 SNRPCP09234 159 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-203ENST00000540017 B2MP61769 119 aa13.32□□□□□ -0.28
SNRPA1-203ENST00000540017 Q6ZRG5 221 aa13.32□□□□□ -0.28
SNRPA1-203ENST00000540017 S100A7AQ86SG5 101 aa13.32□□□□□ -0.28
SNRPA1-203ENST00000540017 CSNK1G2-AS1Q8NCQ2 148 aa13.32□□□□□ -0.28
SNRPA1-203ENST00000540017 NPCDR1Q9BY65 106 aa13.32□□□□□ -0.28
SNRPA1-203ENST00000540017 MED28Q9H204 178 aa13.32□□□□□ -0.28
SNRPA1-203ENST00000540017 PXMP4Q9Y6I8 212 aa13.32□□□□□ -0.28
SNRPA1-203ENST00000540017 A0A0J9YX75 114 aa13.31□□□□□ -0.28
SNRPA1-203ENST00000540017 PET100P0DJ07 73 aa13.31□□□□□ -0.28
SNRPA1-203ENST00000540017 HLA-DMBP28068 263 aa13.31□□□□□ -0.28
SNRPA1-203ENST00000540017 SAMD13Q5VXD3 122 aa13.31□□□□□ -0.28
SNRPA1-203ENST00000540017 RPRMQ9NS64 109 aa13.31□□□□□ -0.28
SNRPA1-203ENST00000540017 HSPB11Q9Y547 144 aa13.31□□□□□ -0.28
SNRPA1-203ENST00000540017 MPDU1O75352 247 aa13.3□□□□□ -0.28
SNRPA1-203ENST00000540017 RPL12P30050 165 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-203ENST00000540017 FXYD7P58549 80 aa13.3□□□□□ -0.28
SNRPA1-203ENST00000540017 RGS21Q2M5E4 152 aa13.3□□□□□ -0.28
SNRPA1-203ENST00000540017 GCSAMLQ5JQS6 135 aa13.3□□□□□ -0.28
SNRPA1-203ENST00000540017 FAM78BQ5VT40 261 aa13.3□□□□□ -0.28
SNRPA1-203ENST00000540017 IL17DQ8TAD2 202 aa13.3□□□□□ -0.28
SNRPA1-203ENST00000540017 WDR61Q9GZS3 305 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-203ENST00000540017 XCL2Q9UBD3 114 aa13.3□□□□□ -0.28
SNRPA1-203ENST00000540017 H3BTX0 84 aa13.29□□□□□ -0.28
SNRPA1-203ENST00000540017 PRB4P10163 310 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-203ENST00000540017 OXA1LQ15070 435 aa13.29□□□□□ -0.28
SNRPA1-203ENST00000540017 TMEM41BQ5BJD5 291 aa13.29□□□□□ -0.28
SNRPA1-203ENST00000540017 OR4B1Q8NGF8 309 aa13.29□□□□□ -0.28
SNRPA1-203ENST00000540017 OR1L4Q8NGR5 311 aa13.29□□□□□ -0.28
SNRPA1-203ENST00000540017 SMIM3Q9BZL3 60 aa13.29□□□□□ -0.28
SNRPA1-203ENST00000540017 H3BQ15 152 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 DEFB4AO15263 64 aa13.28□□□□□ -0.28
SNRPA1-203ENST00000540017 ZNF705DP0CH99 300 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 607.3 ms