RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 TMEM186Q96B77 213 aa14.06□□□□□ -0.16
RAB40C-205ENST00000539661 TMEM238C9JI98 176 aa14.05□□□□□ -0.16
RAB40C-205ENST00000539661 IGLV2-11P01706 119 aa14.05□□□□□ -0.16
RAB40C-205ENST00000539661 CEACAM3P40198 252 aa14.05□□□□□ -0.16
RAB40C-205ENST00000539661 HSD52Q0P140 79 aa14.05□□□□□ -0.16
RAB40C-205ENST00000539661 LGALS9BQ3B8N2 356 aa14.05□□□□□ -0.16
RAB40C-205ENST00000539661 LGALS9CQ6DKI2 356 aa14.05□□□□□ -0.16
RAB40C-205ENST00000539661 C8orf31Q8N9H6 132 aa14.05□□□□□ -0.16
RAB40C-205ENST00000539661 SPAARA0A1B0GVQ0 90 aa14.05□□□□□ -0.16
RAB40C-205ENST00000539661 IGHV1-46P01743 117 aa14.05□□□□□ -0.16
RAB40C-205ENST00000539661 TIMM23BQ5SRD1 257 aa14.05□□□□□ -0.16
RAB40C-205ENST00000539661 LINC00311Q8N616 119 aa14.05□□□□□ -0.16
RAB40C-205ENST00000539661 NCR2O95944 276 aa14.04□□□□□ -0.16
RAB40C-205ENST00000539661 RABAC1Q9UI14 185 aa14.04□□□□□ -0.16
RAB40C-205ENST00000539661 CHTOPQ9Y3Y2 248 aaKnown RBP14.04□□□□□ -0.16
RAB40C-205ENST00000539661 SAP30O75446 220 aa14.04□□□□□ -0.16
RAB40C-205ENST00000539661 ARMS2P0C7Q2 107 aa14.04□□□□□ -0.16
RAB40C-205ENST00000539661 VHLLQ6RSH7 139 aa14.04□□□□□ -0.16
RAB40C-205ENST00000539661 PRNTQ86SH4 94 aa14.04□□□□□ -0.16
RAB40C-205ENST00000539661 HIGD1AQ9Y241 93 aa14.04□□□□□ -0.16
RAB40C-205ENST00000539661 FOXE3Q13461 319 aa14.03□□□□□ -0.16
RAB40C-205ENST00000539661 OR4X2Q8NGF9 303 aa14.03□□□□□ -0.16
RAB40C-205ENST00000539661 TIMM8BQ9Y5J9 83 aaPredicted RBP14.03□□□□□ -0.16
RAB40C-205ENST00000539661 APOBEC3AP31941 199 aaPredicted RBP14.03□□□□□ -0.16
RAB40C-205ENST00000539661 ZNF493Q6ZR52 646 aa14.03□□□□□ -0.16
RAB40C-205ENST00000539661 TMEM75Q8N9X5 138 aa14.03□□□□□ -0.16
RAB40C-205ENST00000539661 SRSF12Q8WXF0 261 aaKnown RBP14.03□□□□□ -0.16
RAB40C-205ENST00000539661 ZNF318Q5VUA4 2279 aa14.02□□□□□ -0.16
RAB40C-205ENST00000539661 TRAV8-1A0A0A6YYK1 113 aa14.02□□□□□ -0.16
RAB40C-205ENST00000539661 SNAI2O43623 268 aa14.02□□□□□ -0.16
RAB40C-205ENST00000539661 MC5RP33032 325 aa14.02□□□□□ -0.16
RAB40C-205ENST00000539661 LGALS7P47929 136 aa14.02□□□□□ -0.16
RAB40C-205ENST00000539661 GOLT1AQ6ZVE7 132 aa14.02□□□□□ -0.16
RAB40C-205ENST00000539661 NEGR1Q7Z3B1 354 aa14.02□□□□□ -0.16
RAB40C-205ENST00000539661 OR5A1Q8NGJ0 315 aa14.02□□□□□ -0.16
RAB40C-205ENST00000539661 COL25A1Q9BXS0 654 aaPredicted RBP14.02□□□□□ -0.16
RAB40C-205ENST00000539661 A1L4Q6 167 aa14.02□□□□□ -0.17
RAB40C-205ENST00000539661 SMAD7O15105 426 aaKnown RBP14.02□□□□□ -0.17
RAB40C-205ENST00000539661 RUSC1-AS1Q66K80 236 aa14.02□□□□□ -0.17
RAB40C-205ENST00000539661 OR2K2Q8NGT1 345 aa14.02□□□□□ -0.17
RAB40C-205ENST00000539661 JMJD8Q96S16 334 aa14.02□□□□□ -0.17
RAB40C-205ENST00000539661 H3BTX0 84 aa14.01□□□□□ -0.17
RAB40C-205ENST00000539661 SLC25A17O43808 307 aa14.01□□□□□ -0.17
RAB40C-205ENST00000539661 UQCRFS1P47985 274 aa14.01□□□□□ -0.17
RAB40C-205ENST00000539661 LHFPL4Q7Z7J7 247 aa14.01□□□□□ -0.17
RAB40C-205ENST00000539661 DEFB124Q8NES8 71 aa14.01□□□□□ -0.17
RAB40C-205ENST00000539661 CADP27708 2225 aa14.01□□□□□ -0.17
RAB40C-205ENST00000539661 A0A0G2JLM5 398 aa14.01□□□□□ -0.17
RAB40C-205ENST00000539661 WT1P19544 449 aaPredicted RBP14.01□□□□□ -0.17
RAB40C-205ENST00000539661 KIR3DS1Q14943 382 aa14.01□□□□□ -0.17
RAB40C-205ENST00000539661 MRGPRG-AS1Q2M3A8 158 aa14.01□□□□□ -0.17
RAB40C-205ENST00000539661 U3KQK5 164 aa14.01□□□□□ -0.17
RAB40C-205ENST00000539661 A0A096LNJ9 63 aa14□□□□□ -0.17
RAB40C-205ENST00000539661 ZNF785A8K8V0 405 aa14□□□□□ -0.17
RAB40C-205ENST00000539661 H3BUT2 72 aa14□□□□□ -0.17
RAB40C-205ENST00000539661 NKX2-8O15522 239 aa14□□□□□ -0.17
RAB40C-205ENST00000539661 NHLH1Q02575 133 aa14□□□□□ -0.17
RAB40C-205ENST00000539661 ZC2HC1AQ96GY0 325 aa14□□□□□ -0.17
RAB40C-205ENST00000539661 SVEP1Q4LDE5 3571 aa14□□□□□ -0.17
RAB40C-205ENST00000539661 HCP5Q6MZN7 132 aa14□□□□□ -0.17
RAB40C-205ENST00000539661 ZADH2Q8N4Q0 377 aa14□□□□□ -0.17
RAB40C-205ENST00000539661 ROS1P08922 2347 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 K7EQM0 130 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 SMIM17P0DL12 118 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 CCL3L1P16619 93 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 ADAMTSL5Q6ZMM2 481 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 OR8A1Q8NGG7 326 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 JKAMPQ9P055 326 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 PCNX1Q96RV3 2341 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 ACACAQ13085 2346 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 MBD3L4A6NDZ8 208 aaPredicted RBP13.99□□□□□ -0.17
RAB40C-205ENST00000539661 MBD3L3A6NE82 208 aaPredicted RBP13.99□□□□□ -0.17
RAB40C-205ENST00000539661 MBD3L5A6NJ08 208 aaPredicted RBP13.99□□□□□ -0.17
RAB40C-205ENST00000539661 CIDEAO60543 219 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 IFI27P40305 119 aaPredicted RBP13.99□□□□□ -0.17
RAB40C-205ENST00000539661 RIPPLY3P57055 190 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 TMEM200BQ69YZ2 307 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 MBD3L2Q8NHZ7 208 aaPredicted RBP13.99□□□□□ -0.17
RAB40C-205ENST00000539661 SLC25A39Q9BZJ4 359 aaPredicted RBP13.99□□□□□ -0.17
RAB40C-205ENST00000539661 TPSG1Q9NRR2 321 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 NAV3Q8IVL0 2385 aa13.99□□□□□ -0.17
RAB40C-205ENST00000539661 TNFRSF1AP19438 455 aa13.98□□□□□ -0.17
RAB40C-205ENST00000539661 RPL27AP46776 148 aaKnown RBP13.98□□□□□ -0.17
RAB40C-205ENST00000539661 EXOC3-AS1Q8N2X6 119 aa13.98□□□□□ -0.17
RAB40C-205ENST00000539661 INTS1Q8N201 2190 aaKnown RBP13.98□□□□□ -0.17
RAB40C-205ENST00000539661 DIAPH2-AS1Q14236 149 aa13.98□□□□□ -0.17
RAB40C-205ENST00000539661 PSMG4Q5JS54 123 aa13.98□□□□□ -0.17
RAB40C-205ENST00000539661 LYPD1Q8N2G4 141 aa13.98□□□□□ -0.17
RAB40C-205ENST00000539661 SIGLEC8Q9NYZ4 499 aa13.98□□□□□ -0.17
RAB40C-205ENST00000539661 TRAV17A0A0B4J275 112 aa13.97□□□□□ -0.17
RAB40C-205ENST00000539661 A0A1W2PPM0 123 aa13.97□□□□□ -0.17
RAB40C-205ENST00000539661 SPOCK3Q9BQ16 436 aa13.97□□□□□ -0.17
RAB40C-205ENST00000539661 S100A7P31151 101 aa13.97□□□□□ -0.17
RAB40C-205ENST00000539661 LYZP61626 148 aa13.97□□□□□ -0.17
RAB40C-205ENST00000539661 IGFL2Q6UWQ7 119 aa13.97□□□□□ -0.17
RAB40C-205ENST00000539661 NPFFR1Q9GZQ6 430 aa13.97□□□□□ -0.17
RAB40C-205ENST00000539661 THYN1Q9P016 225 aa13.97□□□□□ -0.17
RAB40C-205ENST00000539661 APC2O95996 2303 aa13.97□□□□□ -0.17
RAB40C-205ENST00000539661 CT45A10P0DMU9 189 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms