RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 TMEM183AQ8IXX5 376 aa2.39□□□□□ -2.03
YBX3-205ENST00000536107 BPIFB6Q8NFQ5 453 aa2.39□□□□□ -2.03
YBX3-205ENST00000536107 OR6F1Q8NGZ6 308 aa2.39□□□□□ -2.03
YBX3-205ENST00000536107 LYPD6BQ8NI32 183 aa2.39□□□□□ -2.03
YBX3-205ENST00000536107 LINC00479Q96M42 142 aa2.39□□□□□ -2.03
YBX3-205ENST00000536107 MYCBPQ99417 103 aaPredicted RBP2.39□□□□□ -2.03
YBX3-205ENST00000536107 TMEM109Q9BVC6 243 aa2.39□□□□□ -2.03
YBX3-205ENST00000536107 TMEM59Q9BXS4 323 aa2.39□□□□□ -2.03
YBX3-205ENST00000536107 EFCAB1Q9HAE3 211 aa2.39□□□□□ -2.03
YBX3-205ENST00000536107 PLEKHA2Q9HB19 425 aa2.39□□□□□ -2.03
YBX3-205ENST00000536107 KCNK7Q9Y2U2 307 aa2.39□□□□□ -2.03
YBX3-205ENST00000536107 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 A0A075B6Q4 140 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 A0A1W2PPK0 400 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 hDV102S1A0JD36 115 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 M0R2T5 61 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 SULT1C2O00338 296 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 TNFSF12O43508 249 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 SLC22A5O76082 557 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 ATG12O94817 140 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 ORM1P02763 201 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 IL4P05112 153 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 OR5AC1P0C628 307 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 PRKACGP22612 351 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 TAS2R31P59538 309 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 ERHP84090 104 aaKnown RBP2.38□□□□□ -2.03
YBX3-205ENST00000536107 HIST1H1AQ02539 215 aaPredicted RBP2.38□□□□□ -2.03
YBX3-205ENST00000536107 PSG3Q16557 428 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 SAMD13Q5VXD3 122 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 TMEM268Q5VZI3 342 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 ZNF555Q8NEP9 628 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 LGALS14Q8TCE9 139 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 MAFIPQ8WZ33 124 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 RNF185Q96GF1 192 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 ST6GAL2Q96JF0 529 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 C2orf50Q96LR7 162 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 DERL3Q96Q80 235 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 PBDC1Q9BVG4 233 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 RPS10P5Q9NQ39 176 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 URGCP-MRPS24S4R325 110 aa2.38□□□□□ -2.03
YBX3-205ENST00000536107 TRAV8-7A0A075B6U6 113 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 E9PI62 339 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 HPRT1P00492 218 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 UBBP0CG47 229 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 NUP62P37198 522 aaPredicted RBP2.37□□□□□ -2.03
YBX3-205ENST00000536107 SNCAP37840 140 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 OPRK1P41145 380 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 MAGOHP61326 146 aaKnown RBP2.37□□□□□ -2.03
YBX3-205ENST00000536107 MRPL28Q13084 256 aaKnown RBP2.37□□□□□ -2.03
YBX3-205ENST00000536107 DAZ2Q13117 558 aaKnown RBP2.37□□□□□ -2.03
YBX3-205ENST00000536107 OR2F1Q13607 317 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 FLOT2Q14254 428 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 SDIM1Q6ZPB5 146 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 LHFPL3Q86UP9 236 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 H1FOOQ8IZA3 346 aaPredicted RBP2.37□□□□□ -2.03
YBX3-205ENST00000536107 SYS1Q8N2H4 156 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 ACBD7Q8N6N7 88 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 C9orf163Q8N9P6 203 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 CCDC71LQ8N9Z2 235 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 ZNF738Q8NE65 137 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 Q8TAT8 98 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 SLC35E1Q96K37 410 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 CABLES2Q9BTV7 478 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 MRPL32Q9BYC8 188 aaKnown RBP2.37□□□□□ -2.03
YBX3-205ENST00000536107 SAR1AQ9NR31 198 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 GSN-AS1Q9NRJ2 163 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 FGFR1OP2Q9NVK5 253 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 FKBP11Q9NYL4 201 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 PRNDQ9UKY0 176 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
YBX3-205ENST00000536107 TRAV30A0A087WSZ9 112 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 TRAV1-1A0A0B4J248 108 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 A8MTW9 85 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 A8MU10 97 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 SOCS3O14543 225 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 COX4I1P13073 169 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 NFYAP23511 347 aaPredicted RBP2.36□□□□□ -2.03
YBX3-205ENST00000536107 TALDO1P37837 337 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 CBX5P45973 191 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 CCR6P51684 374 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 GTF2A1P52655 376 aaPredicted RBP2.36□□□□□ -2.03
YBX3-205ENST00000536107 FGL1Q08830 312 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 SRSF9Q13242 221 aaKnown RBP eCLIP2.36□□□□□ -2.03
YBX3-205ENST00000536107 TMED1Q13445 227 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 RAB11BQ15907 218 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 VWC2Q2TAL6 325 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 PAPPA-AS1Q5QFB9 102 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 IDNKQ5T6J7 187 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 DAZ4Q86SG3 579 aaKnown RBP2.36□□□□□ -2.03
YBX3-205ENST00000536107 NOXA1Q86UR1 476 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 CROCCP3Q8IVE0 287 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 CDH26Q8IXH8 852 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 C10orf67Q8IYJ2 551 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 HS3ST5Q8IZT8 346 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 OR8I2Q8N0Y5 310 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 TSPAN14Q8NG11 270 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 OR1S2Q8NGQ3 325 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 OR5H2Q8NGV7 314 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 ARHGAP5-AS1Q96IT6 56 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 PGLYRP3Q96LB9 341 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms