RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, human

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-222	ENST00000531551	C16orf54	Q6UWD8	224 aa		13.36	□□□□□ -0.27
CTSB-222	ENST00000531551	MRPL32	Q9BYC8	188 aa	Known RBP	13.36	□□□□□ -0.27
CTSB-222	ENST00000531551	CMYA5	Q8N3K9	4069 aa		13.35	□□□□□ -0.27
CTSB-222	ENST00000531551	FHIT	P49789	147 aa		13.35	□□□□□ -0.27
CTSB-222	ENST00000531551	TCF24	Q7RTU0	167 aa		13.35	□□□□□ -0.27
CTSB-222	ENST00000531551	ACTR3C	Q9C0K3	210 aa	Predicted RBP	13.35	□□□□□ -0.27
CTSB-222	ENST00000531551	SIGLEC8	Q9NYZ4	499 aa		13.35	□□□□□ -0.27
CTSB-222	ENST00000531551	UMAD1	C9J7I0	102 aa		13.34	□□□□□ -0.27
CTSB-222	ENST00000531551	SNRPC	P09234	159 aa	Known RBP	13.34	□□□□□ -0.27
CTSB-222	ENST00000531551	DEFB114	Q30KQ6	69 aa		13.34	□□□□□ -0.27
CTSB-222	ENST00000531551	CD300E	Q496F6	205 aa	Predicted RBP	13.34	□□□□□ -0.27
CTSB-222	ENST00000531551	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.34	□□□□□ -0.27
CTSB-222	ENST00000531551	FAM213B	Q8TBF2	198 aa		13.34	□□□□□ -0.27
CTSB-222	ENST00000531551	C1orf194	Q5T5A4	169 aa		13.33	□□□□□ -0.27
CTSB-222	ENST00000531551	SIGLEC15	Q6ZMC9	328 aa		13.33	□□□□□ -0.27
CTSB-222	ENST00000531551	GLMP	Q8WWB7	406 aa		13.33	□□□□□ -0.27
CTSB-222	ENST00000531551	RAB24	Q969Q5	203 aa		13.33	□□□□□ -0.27
CTSB-222	ENST00000531551	PHYHIPL	Q96FC7	376 aa		13.33	□□□□□ -0.27
CTSB-222	ENST00000531551	TECR	Q9NZ01	308 aa	Known RBP	13.33	□□□□□ -0.27
CTSB-222	ENST00000531551	RNF24	Q9Y225	148 aa		13.33	□□□□□ -0.27
CTSB-222	ENST00000531551	OR7C2	O60412	319 aa		13.33	□□□□□ -0.28
CTSB-222	ENST00000531551	BPIFA4P	Q86YQ2	179 aa		13.33	□□□□□ -0.28
CTSB-222	ENST00000531551	GBGT1	Q8N5D6	347 aa		13.33	□□□□□ -0.28
CTSB-222	ENST00000531551	SLC25A2	Q9BXI2	301 aa		13.33	□□□□□ -0.28
CTSB-222	ENST00000531551	HELT	A6NFD8	242 aa		13.32	□□□□□ -0.28
CTSB-222	ENST00000531551	RPL7	P18124	248 aa	Known RBP	13.32	□□□□□ -0.28
CTSB-222	ENST00000531551	INSL3	P51460	131 aa		13.32	□□□□□ -0.28
CTSB-222	ENST00000531551	TAS2R45	P59539	299 aa		13.32	□□□□□ -0.28
CTSB-222	ENST00000531551	OXLD1	Q5BKU9	147 aa		13.32	□□□□□ -0.28
CTSB-222	ENST00000531551	SSX7	Q7RTT5	188 aa		13.32	□□□□□ -0.28
CTSB-222	ENST00000531551	ZNF785	A8K8V0	405 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	IGLV1-51	P01701	117 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	GALR1	P47211	349 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	TFPI2	P48307	235 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	SULT1A2	P50226	295 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	ZNF726P1	Q15940	193 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	TEX261	Q6UWH6	196 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	LCN15	Q6UWW0	184 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	WFDC3	Q8IUB2	231 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	TMEM61	Q8N0U2	210 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	IZUMO1R	A6ND01	250 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	PYY	P10082	97 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	GUCA2B	Q16661	112 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	KHDC3L	Q587J8	217 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	IQCF2	Q8IXL9	164 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	STXBP6	Q8NFX7	210 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	FAM167A-AS1	Q96KT0	104 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	GPR82	Q96P67	336 aa		13.31	□□□□□ -0.28
CTSB-222	ENST00000531551	CTXND1	A0A1B0GTU2	59 aa		13.3	□□□□□ -0.28
CTSB-222	ENST00000531551		A0A1B0GV50	99 aa		13.3	□□□□□ -0.28
CTSB-222	ENST00000531551		H3BTX0	84 aa		13.3	□□□□□ -0.28
CTSB-222	ENST00000531551	OR10J4	P0C629	311 aa		13.3	□□□□□ -0.28
CTSB-222	ENST00000531551	ATF4	P18848	351 aa	Predicted RBP	13.3	□□□□□ -0.28
CTSB-222	ENST00000531551	RAB5C	P51148	216 aa		13.3	□□□□□ -0.28
CTSB-222	ENST00000531551	FAM90A2P	Q658T7	463 aa		13.3	□□□□□ -0.28
CTSB-222	ENST00000531551	PAXX	Q9BUH6	204 aa		13.3	□□□□□ -0.28
CTSB-222	ENST00000531551	OR51M1	Q9H341	326 aa		13.3	□□□□□ -0.28
CTSB-222	ENST00000531551	SMAD5-AS1	Q9Y6J3	95 aa		13.3	□□□□□ -0.28
CTSB-222	ENST00000531551	DNASE2	O00115	360 aa	Predicted RBP	13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	FGF8	P55075	233 aa	Predicted RBP	13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	RNF141	Q8WVD5	230 aa		13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	CD5	P06127	495 aa		13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	STAG3L2	P0CL84	134 aa		13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	STAG3L3	P0CL85	134 aa		13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	PAFAH1B2	P68402	229 aa		13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	DPPA3	Q6W0C5	159 aa		13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	ZNF680	Q8NEM1	530 aa		13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	SFT2D1	Q8WV19	159 aa		13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	GPR61	Q9BZJ8	451 aa		13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	MS4A6A	Q9H2W1	248 aa		13.29	□□□□□ -0.28
CTSB-222	ENST00000531551	MAP1LC3B2	A6NCE7	125 aa		13.28	□□□□□ -0.28
CTSB-222	ENST00000531551	IFNA7	P01567	189 aa		13.28	□□□□□ -0.28
CTSB-222	ENST00000531551	H2AFB1	P0C5Y9	115 aa		13.28	□□□□□ -0.28
CTSB-222	ENST00000531551	ARL14EPL	P0DKL9	152 aa		13.28	□□□□□ -0.28
CTSB-222	ENST00000531551	GP9	P14770	177 aa		13.28	□□□□□ -0.28
CTSB-222	ENST00000531551	LCN12	Q6JVE5	192 aa		13.28	□□□□□ -0.28
CTSB-222	ENST00000531551	BLNK	Q8WV28	456 aa		13.28	□□□□□ -0.28
CTSB-222	ENST00000531551	MAP1LC3B	Q9GZQ8	125 aa		13.28	□□□□□ -0.28
CTSB-222	ENST00000531551	TSPAN4	O14817	238 aa		13.27	□□□□□ -0.28
CTSB-222	ENST00000531551	MRPS12	O15235	138 aa	Known RBP	13.27	□□□□□ -0.28
CTSB-222	ENST00000531551	UBE2L3	P68036	154 aa	Known RBP	13.27	□□□□□ -0.28
CTSB-222	ENST00000531551	PQLC2	Q6ZP29	291 aa		13.27	□□□□□ -0.28
CTSB-222	ENST00000531551	OR2K2	Q8NGT1	345 aa		13.27	□□□□□ -0.28
CTSB-222	ENST00000531551	LRRC20	Q8TCA0	184 aa		13.27	□□□□□ -0.28
CTSB-222	ENST00000531551	ZNF503	Q96F45	646 aa		13.27	□□□□□ -0.28
CTSB-222	ENST00000531551	C17orf77	Q96MU5	243 aa		13.27	□□□□□ -0.28
CTSB-222	ENST00000531551	NRN1	Q9NPD7	142 aa		13.27	□□□□□ -0.28
CTSB-222	ENST00000531551	TMEM14C	Q9P0S9	112 aa		13.27	□□□□□ -0.28
CTSB-222	ENST00000531551	TRAV25	A0A0B4J276	109 aa		13.27	□□□□□ -0.29
CTSB-222	ENST00000531551		G3V4G9	280 aa		13.27	□□□□□ -0.29
CTSB-222	ENST00000531551		H3BQ15	152 aa		13.27	□□□□□ -0.29
CTSB-222	ENST00000531551	CXorf1	O96002	111 aa		13.27	□□□□□ -0.29
CTSB-222	ENST00000531551	IGLC2	P0DOY2	106 aa		13.26	□□□□□ -0.29
CTSB-222	ENST00000531551	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.26	□□□□□ -0.29
CTSB-222	ENST00000531551	HRH4	Q9H3N8	390 aa		13.26	□□□□□ -0.29
CTSB-222	ENST00000531551	ZNF586	Q9NXT0	402 aa		13.26	□□□□□ -0.29
CTSB-222	ENST00000531551	UBQLN2	Q9UHD9	624 aa		13.26	□□□□□ -0.29
CTSB-222	ENST00000531551	HIST1H1E	P10412	219 aa	Known RBP	13.25	□□□□□ -0.29
CTSB-222	ENST00000531551	PCNP	Q8WW12	178 aa	Known RBP	13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms