RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 RRP15Q9Y3B9 282 aaKnown RBP5.49□□□□□ -1.53
USP48-212ENST00000527823 TPRKBQ9Y3C4 175 aa5.49□□□□□ -1.53
USP48-212ENST00000527823 A0A0A6YYH2 397 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 A0A0J9YY99 117 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 CBY3A6NI87 242 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 A6NJ64 397 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 ISLRO14498 428 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 CBX5P45973 191 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 AKR1C2P52895 323 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 SUB1P53999 127 aaKnown RBP eCLIP5.48□□□□□ -1.53
USP48-212ENST00000527823 TAS2R20P59543 309 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 EBLN2Q6P2I7 272 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 OR11H7Q8NGC8 314 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 OR5H2Q8NGV7 314 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 RXFP4Q8TDU9 374 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 GNPNAT1Q96EK6 184 aaPredicted RBP5.48□□□□□ -1.53
USP48-212ENST00000527823 RNF125Q96EQ8 232 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 ABHD1Q96SE0 405 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 TXNL4BQ9NX01 149 aaKnown RBP5.48□□□□□ -1.53
USP48-212ENST00000527823 KLK11Q9UBX7 282 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 TNFRSF18Q9Y5U5 241 aa5.48□□□□□ -1.53
USP48-212ENST00000527823 TNXBP22105 4242 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 TRAV12-2A0A075B6T6 113 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 ZNF701M0R085 212 aaPredicted RBP5.47□□□□□ -1.53
USP48-212ENST00000527823 IFNA5P01569 189 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 SLC25A4P12235 298 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 M6PRP20645 277 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 PSMB9P28065 219 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 HRH1P35367 487 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 ID1P41134 155 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 CNN1P51911 297 aaKnown RBP5.47□□□□□ -1.53
USP48-212ENST00000527823 TAS2R46P59540 309 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 SUPT4H1P63272 117 aaKnown RBP5.47□□□□□ -1.53
USP48-212ENST00000527823 LINC00612Q8N6U2 182 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 RNASE8Q8TDE3 154 aaKnown RBP5.47□□□□□ -1.53
USP48-212ENST00000527823 C16orf74Q96GX8 76 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 TP53RKQ96S44 253 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 TMEM70Q9BUB7 260 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 PDCD10Q9BUL8 212 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 PBDC1Q9BVG4 233 aa5.47□□□□□ -1.53
USP48-212ENST00000527823 IGKV2-30P06310 120 aa5.46□□□□□ -1.54
USP48-212ENST00000527823 RD3LP0DJH9 198 aa5.46□□□□□ -1.54
USP48-212ENST00000527823 NUP62P37198 522 aaPredicted RBP5.46□□□□□ -1.54
USP48-212ENST00000527823 HTR2BP41595 481 aa5.46□□□□□ -1.54
USP48-212ENST00000527823 AQP4P55087 323 aa5.46□□□□□ -1.54
USP48-212ENST00000527823 MXD1Q05195 221 aa5.46□□□□□ -1.54
USP48-212ENST00000527823 OR5I1Q13606 314 aa5.46□□□□□ -1.54
USP48-212ENST00000527823 AARDQ4LEZ3 155 aa5.46□□□□□ -1.54
USP48-212ENST00000527823 OR8G2PQ6IF36 304 aa5.46□□□□□ -1.54
USP48-212ENST00000527823 SLC24A4Q8NFF2 622 aa5.46□□□□□ -1.54
USP48-212ENST00000527823 ACY3Q96HD9 319 aa5.46□□□□□ -1.54
USP48-212ENST00000527823 ENY2Q9NPA8 101 aa5.46□□□□□ -1.54
USP48-212ENST00000527823 NOP10Q9NPE3 64 aaKnown RBP5.46□□□□□ -1.54
USP48-212ENST00000527823 RPRMQ9NS64 109 aa5.46□□□□□ -1.54
USP48-212ENST00000527823 IGKV1D-37A0A075B6S9 117 aa5.45□□□□□ -1.54
USP48-212ENST00000527823 A0A096LPF7 62 aa5.45□□□□□ -1.54
USP48-212ENST00000527823 BOLA2-SMG1P6H3BVE0 249 aa5.45□□□□□ -1.54
USP48-212ENST00000527823 HLA-DMAP28067 261 aa5.45□□□□□ -1.54
USP48-212ENST00000527823 S100GP29377 79 aa5.45□□□□□ -1.54
USP48-212ENST00000527823 SDC2P34741 201 aa5.45□□□□□ -1.54
USP48-212ENST00000527823 VAMP2P63027 116 aa5.45□□□□□ -1.54
USP48-212ENST00000527823 TWIST1Q15672 202 aa5.45□□□□□ -1.54
USP48-212ENST00000527823 C2orf83Q53S99 150 aa5.45□□□□□ -1.54
USP48-212ENST00000527823 IDNKQ5T6J7 187 aa5.45□□□□□ -1.54
USP48-212ENST00000527823 RNASEH2CQ8TDP1 164 aaKnown RBP5.45□□□□□ -1.54
USP48-212ENST00000527823 H3BNG1 76 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 SIVA1O15304 175 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 NXPH4O95158 308 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 TAS2R60P59551 318 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 RND3P61587 244 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 LYZP61626 148 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 B2MP61769 119 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 ZNF90Q03938 601 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 C1orf194Q5T5A4 169 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 ARRDC1Q8N5I2 433 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 OR10J6PQ8NGY7 276 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 TMEM263Q8WUH6 116 aaKnown RBP5.44□□□□□ -1.54
USP48-212ENST00000527823 SLC25A39Q9BZJ4 359 aaPredicted RBP5.44□□□□□ -1.54
USP48-212ENST00000527823 DIABLOQ9NR28 239 aa5.44□□□□□ -1.54
USP48-212ENST00000527823 TIMM8BQ9Y5J9 83 aaPredicted RBP5.44□□□□□ -1.54
USP48-212ENST00000527823 TRAV8-2A0A0B4J237 113 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 GAGE12JA6NER3 117 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 HTN1P15515 57 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 MEOX2P50222 304 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 SPCS3P61009 180 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 RPP30P78346 268 aaKnown RBP5.43□□□□□ -1.54
USP48-212ENST00000527823 NMSQ5H8A3 153 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 SAMD13Q5VXD3 122 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 LPCAT3Q6P1A2 487 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 GPR141Q7Z602 305 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 RNF182Q8N6D2 247 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 DEFB104AQ8WTQ1 72 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 RRNAD1Q96FB5 475 aaKnown RBP5.43□□□□□ -1.54
USP48-212ENST00000527823 VSIG2Q96IQ7 327 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 LINC01587Q99440 93 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 VCXQ9H320 206 aa5.43□□□□□ -1.54
USP48-212ENST00000527823 IGLV5-52A0A0A0MRZ9 124 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 GAGE7O76087 117 aa5.42□□□□□ -1.54
USP48-212ENST00000527823 DUSP14O95147 198 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 250.8 ms