RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 NPCDR1Q9BY65 106 aa8.03□□□□□ -1.12
USP35-201ENST00000526425 CTXND1A0A1B0GTU2 59 aa8.03□□□□□ -1.12
USP35-201ENST00000526425 C9orf118A6NHY6 69 aa8.03□□□□□ -1.12
USP35-201ENST00000526425 H3BMG7 143 aa8.03□□□□□ -1.12
USP35-201ENST00000526425 CD24P25063 80 aa8.03□□□□□ -1.12
USP35-201ENST00000526425 FAM181BA6NEQ2 426 aa8.02□□□□□ -1.12
USP35-201ENST00000526425 IGKV1-16P04430 117 aa8.02□□□□□ -1.12
USP35-201ENST00000526425 ERHP84090 104 aaKnown RBP8.02□□□□□ -1.12
USP35-201ENST00000526425 MLANAQ16655 118 aa8.02□□□□□ -1.12
USP35-201ENST00000526425 TTC32Q5I0X7 151 aa8.02□□□□□ -1.12
USP35-201ENST00000526425 TEX29Q8N6K0 151 aa8.02□□□□□ -1.12
USP35-201ENST00000526425 IGFBPL1Q8WX77 278 aa8.02□□□□□ -1.12
USP35-201ENST00000526425 FLYWCH2Q96CP2 140 aaKnown RBP8.02□□□□□ -1.12
USP35-201ENST00000526425 CENPEQ02224 2701 aa8.02□□□□□ -1.12
USP35-201ENST00000526425 LINC00869P0C866 280 aa8.02□□□□□ -1.13
USP35-201ENST00000526425 LINC00173Q6ZV60 143 aa8.02□□□□□ -1.13
USP35-201ENST00000526425 OCC1Q8TAD7 63 aa8.02□□□□□ -1.13
USP35-201ENST00000526425 SPXQ9BT56 116 aa8.02□□□□□ -1.13
USP35-201ENST00000526425 CYSLTR1Q9Y271 337 aa8.02□□□□□ -1.13
USP35-201ENST00000526425 CSN1S1P47710 185 aa8.02□□□□□ -1.13
USP35-201ENST00000526425 VWC2Q2TAL6 325 aa8.02□□□□□ -1.13
USP35-201ENST00000526425 GAFA1Q96PS6 74 aa8.02□□□□□ -1.13
USP35-201ENST00000526425 HES4Q9HCC6 221 aa8.02□□□□□ -1.13
USP35-201ENST00000526425 SSUH2Q9Y2M2 353 aa8.02□□□□□ -1.13
USP35-201ENST00000526425 FAM90A26D6RGX4 464 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 K7ERJ3 54 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 NHLRC2Q8NBF2 726 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 FAM110AQ9BQ89 295 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 SOX21Q9Y651 276 aaPredicted RBP8.01□□□□□ -1.13
USP35-201ENST00000526425 USP9YO00507 2555 aaPredicted RBP8.01□□□□□ -1.13
USP35-201ENST00000526425 ZZEF1O43149 2961 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 PRSS29PA6NIE9 313 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 C15orf65H3BRN8 121 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 ARL14EPLP0DKL9 152 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 ORM2P19652 201 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 PSG5Q15238 335 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 NEGR1Q7Z3B1 354 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 RAB1BQ9H0U4 201 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 IFI27L2Q9H2X8 130 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 TLN2Q9Y4G6 2542 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 NPIPB11E5RHQ5 1161 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 H3BTX0 84 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 LEPROTL1O95214 131 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 TGFAP01135 160 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 IGKV1D-33P01593 117 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 IGKV1-33P01594 117 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 FCGR2BP31994 310 aaPredicted RBP8.01□□□□□ -1.13
USP35-201ENST00000526425 HSPE1P61604 102 aaKnown RBP8.01□□□□□ -1.13
USP35-201ENST00000526425 FOXE3Q13461 319 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 OR5AN1Q8NGI8 311 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 OR5A1Q8NGJ0 315 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 RNASE6Q93091 150 aaKnown RBP8.01□□□□□ -1.13
USP35-201ENST00000526425 RPEQ96AT9 228 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 ZFHX4Q86UP3 3567 aa8.01□□□□□ -1.13
USP35-201ENST00000526425 PSMB11A5LHX3 300 aa8□□□□□ -1.13
USP35-201ENST00000526425 OR11H12B2RN74 326 aa8□□□□□ -1.13
USP35-201ENST00000526425 H3BVH4 76 aa8□□□□□ -1.13
USP35-201ENST00000526425 VDAC2P45880 294 aaPredicted RBP8□□□□□ -1.13
USP35-201ENST00000526425 ZNF138P52744 262 aa8□□□□□ -1.13
USP35-201ENST00000526425 SRSF9Q13242 221 aaKnown RBP eCLIP8□□□□□ -1.13
USP35-201ENST00000526425 TEPPQ6URK8 271 aa8□□□□□ -1.13
USP35-201ENST00000526425 C8orf86Q6ZUL3 223 aa8□□□□□ -1.13
USP35-201ENST00000526425 ODF3L1Q8IXM7 274 aa8□□□□□ -1.13
USP35-201ENST00000526425 OR11H1Q8NG94 326 aa8□□□□□ -1.13
USP35-201ENST00000526425 OR11H2Q8NH07 326 aa8□□□□□ -1.13
USP35-201ENST00000526425 ZNF418Q8TF45 676 aaPredicted RBP8□□□□□ -1.13
USP35-201ENST00000526425 GLMPQ8WWB7 406 aa8□□□□□ -1.13
USP35-201ENST00000526425 SGK494Q96LW2 274 aa8□□□□□ -1.13
USP35-201ENST00000526425 RNASE7Q9H1E1 156 aaKnown RBP8□□□□□ -1.13
USP35-201ENST00000526425 PTPN13Q12923 2485 aa8□□□□□ -1.13
USP35-201ENST00000526425 COL8A2P25067 703 aa8□□□□□ -1.13
USP35-201ENST00000526425 DIAPH2-AS1Q14236 149 aa8□□□□□ -1.13
USP35-201ENST00000526425 PET117Q6UWS5 81 aa8□□□□□ -1.13
USP35-201ENST00000526425 TNFRSF18Q9Y5U5 241 aa8□□□□□ -1.13
USP35-201ENST00000526425 A0A1W2PPM0 123 aa8□□□□□ -1.13
USP35-201ENST00000526425 TMEM250H0YL14 139 aa8□□□□□ -1.13
USP35-201ENST00000526425 APOMO95445 188 aa8□□□□□ -1.13
USP35-201ENST00000526425 MFAP2P55001 183 aa8□□□□□ -1.13
USP35-201ENST00000526425 TCTEX1D4Q5JR98 221 aa8□□□□□ -1.13
USP35-201ENST00000526425 TMEM14EPQ6UXP3 125 aa8□□□□□ -1.13
USP35-201ENST00000526425 ADTRPQ96IZ2 230 aa8□□□□□ -1.13
USP35-201ENST00000526425 EAF1Q96JC9 268 aaPredicted RBP8□□□□□ -1.13
USP35-201ENST00000526425 S4R3C0 116 aa8□□□□□ -1.13
USP35-201ENST00000526425 C15orf62A8K5M9 175 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 SAA1P0DJI8 122 aaPredicted RBP7.99□□□□□ -1.13
USP35-201ENST00000526425 KIR2DS2P43631 304 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 RAB1CQ92928 201 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 AGMATQ9BSE5 352 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 NHP2Q9NX24 153 aaKnown RBP7.99□□□□□ -1.13
USP35-201ENST00000526425 NOTCH2Q04721 2471 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 SCO2A0A1W2PP80 73 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 E7EQL1 145 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 ZNF137PP52743 207 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 C17orf58Q2M2W7 97 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 ZFAND6Q6FIF0 208 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 PRNDQ9UKY0 176 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 NCBP2LA6PVI3 153 aaKnown RBP7.99□□□□□ -1.13
USP35-201ENST00000526425 CCDC179H3BU77 68 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 SMIM17P0DL12 118 aa7.99□□□□□ -1.13
USP35-201ENST00000526425 VMA21Q3ZAQ7 101 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms