RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 PAGE4O60829 102 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 CXorf1O96002 111 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 STAG3L2P0CL84 134 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 STAG3L3P0CL85 134 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 IGFL4Q6B9Z1 124 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 BPIFA4PQ86YQ2 179 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 RHPN1-AS1Q9BWJ2 59 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 SLC25A2Q9BXI2 301 aa7.15□□□□□ -1.26
SDCBP-212ENST00000523483 TRRAPQ9Y4A5 3859 aa7.15□□□□□ -1.27
SDCBP-212ENST00000523483 BRI3O95415 125 aa7.15□□□□□ -1.27
SDCBP-212ENST00000523483 GCHFRP30047 84 aa7.15□□□□□ -1.27
SDCBP-212ENST00000523483 S100A7AQ86SG5 101 aa7.15□□□□□ -1.27
SDCBP-212ENST00000523483 RNF152Q8N8N0 203 aa7.15□□□□□ -1.27
SDCBP-212ENST00000523483 OR4F17Q8NGA8 305 aa7.15□□□□□ -1.27
SDCBP-212ENST00000523483 MYOZ3Q8TDC0 251 aa7.15□□□□□ -1.27
SDCBP-212ENST00000523483 OR4F4Q96R69 305 aa7.15□□□□□ -1.27
SDCBP-212ENST00000523483 SHANK2-AS3Q9BTD1 123 aa7.15□□□□□ -1.27
SDCBP-212ENST00000523483 MRPL32Q9BYC8 188 aaKnown RBP7.15□□□□□ -1.27
SDCBP-212ENST00000523483 MRPL27Q9P0M9 148 aaKnown RBP7.15□□□□□ -1.27
SDCBP-212ENST00000523483 ATF4P18848 351 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-212ENST00000523483 DPPA3Q6W0C5 159 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 C12orf54Q6X4T0 127 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 STXBP6Q8NFX7 210 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 C17orf77Q96MU5 243 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 RNF2Q99496 336 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 M0QZ24 198 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 PPT1P50897 306 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 SRSF3P84103 164 aaKnown RBP7.14□□□□□ -1.27
SDCBP-212ENST00000523483 PQLC2Q6ZP29 291 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 DYNLRB2Q8TF09 96 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 MARC2Q969Z3 335 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 SEC14L6B5MCN3 397 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 H3BRN7 92 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 KLK9Q2XQG4 91 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 KLK9Q9UKQ9 250 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 UFC1Q9Y3C8 167 aa7.14□□□□□ -1.27
SDCBP-212ENST00000523483 NBEAP1P0C6P0 100 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 PSMB3P49720 205 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 GUK1Q16774 197 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 GRAMD2BQ96HH9 432 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 FAM167A-AS1Q96KT0 104 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 H3BQ15 152 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 BUB3O43684 328 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 RPL7P18124 248 aaKnown RBP7.13□□□□□ -1.27
SDCBP-212ENST00000523483 PLP1P60201 277 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 SUMO1P63165 101 aaKnown RBP7.13□□□□□ -1.27
SDCBP-212ENST00000523483 GPHB5Q86YW7 130 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 MBD3L1Q8WWY6 194 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 ZNF503Q96F45 646 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 TMEM213A2RRL7 107 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 SAP30O75446 220 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 IFNA1P01562 189 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 FOLR2P14207 255 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 ATP5G3P48201 142 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 C1QL4Q86Z23 238 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 EXOC3-AS1Q8N2X6 119 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 WIPF2Q8TF74 440 aaPredicted RBP7.13□□□□□ -1.27
SDCBP-212ENST00000523483 TMEM158Q8WZ71 300 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 SGK494Q96LW2 274 aa7.13□□□□□ -1.27
SDCBP-212ENST00000523483 A0A1W2PS18 150 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 GALR1P47211 349 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 ZNF674Q2M3X9 581 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 SIGLEC15Q6ZMC9 328 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 OR9G4Q8NGQ1 327 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 IGHV7-4-1A0A0J9YVY3 117 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 RBFOX3A6NFN3 312 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 C11orf94C9JXX5 98 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 OVOL1O14753 267 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 CBLN1P23435 193 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 S100A7P31151 101 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 ZNF414Q96IQ9 312 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 ATP6V0BQ99437 205 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 TMEM167BQ9NRX6 74 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 PEMTQ9UBM1 199 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 C2orf70A6NJV1 201 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 DNASE2O00115 360 aaPredicted RBP7.12□□□□□ -1.27
SDCBP-212ENST00000523483 TSPAN4O14817 238 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 CRYBB3P26998 211 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 TCF24Q7RTU0 167 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 LINC00052Q96N35 136 aa7.12□□□□□ -1.27
SDCBP-212ENST00000523483 YTHDF2Q9Y5A9 579 aaKnown RBP7.12□□□□□ -1.27
SDCBP-212ENST00000523483 BCL2P10415 239 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 KLF5Q13887 457 aaPredicted RBP7.11□□□□□ -1.27
SDCBP-212ENST00000523483 NDUFA11Q86Y39 141 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 RPUSD4Q96CM3 377 aaKnown RBP7.11□□□□□ -1.27
SDCBP-212ENST00000523483 FXYD5Q96DB9 178 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 ZNF586Q9NXT0 402 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 SMPXQ9UHP9 88 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 MGAM2Q2M2H8 2515 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 PGPA6NDG6 321 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 M0R3E3 92 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 SLC17A3O00476 420 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 GP9P14770 177 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 ICAM4Q14773 271 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 GUCA2BQ16661 112 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 RBPMS2Q6ZRY4 209 aaKnown RBP7.11□□□□□ -1.27
SDCBP-212ENST00000523483 RNF182Q8N6D2 247 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 FAM210AQ96ND0 272 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 NOTCH1P46531 2555 aa7.11□□□□□ -1.27
SDCBP-212ENST00000523483 ADARB2-AS1A8MUL3 147 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms