RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 PLGLB1Q02325 96 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 LGALSLQ3ZCW2 172 aaPredicted RBP2.52□□□□□ -2.01
SKP1-209ENST00000522552 KHDC3LQ587J8 217 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 MEIG1Q5JSS6 88 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 TEX261Q6UWH6 196 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 LCN15Q6UWW0 184 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 PATE2Q6UY27 113 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 LINC00311Q8N616 119 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 OR10AC1Q8NH08 325 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 DIRC1Q969H9 104 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 COMMD3Q9UBI1 195 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 MALRD1Q5VYJ5 2156 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 MYH13Q9UKX3 1938 aa2.52□□□□□ -2.01
SKP1-209ENST00000522552 BBIP1A8MTZ0 92 aa2.51□□□□□ -2.01
SKP1-209ENST00000522552 HLA-DRB4P13762 266 aa2.51□□□□□ -2.01
SKP1-209ENST00000522552 AQP4P55087 323 aa2.51□□□□□ -2.01
SKP1-209ENST00000522552 TMEM91Q6ZNR0 172 aa2.51□□□□□ -2.01
SKP1-209ENST00000522552 DYNAPQ8N1N2 210 aa2.51□□□□□ -2.01
SKP1-209ENST00000522552 TXNL4BQ9NX01 149 aaKnown RBP2.51□□□□□ -2.01
SKP1-209ENST00000522552 HLA-DRB4X5D2U9 266 aa2.51□□□□□ -2.01
SKP1-209ENST00000522552 KIF26AQ9ULI4 1882 aaPredicted RBP2.51□□□□□ -2.01
SKP1-209ENST00000522552 TUBGCP6Q96RT7 1819 aa2.51□□□□□ -2.01
SKP1-209ENST00000522552 CDC42BPBQ9Y5S2 1711 aa2.51□□□□□ -2.01
SKP1-209ENST00000522552 LTBP4Q8N2S1 1624 aa2.51□□□□□ -2.01
SKP1-209ENST00000522552 DIDO1Q9BTC0 2240 aaKnown RBP2.51□□□□□ -2.01
SKP1-209ENST00000522552 MYOM3Q5VTT5 1437 aa2.51□□□□□ -2.01
SKP1-209ENST00000522552 H3BPC8 53 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 M0R129 80 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 CCL25O15444 150 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 TRGC1P0CF51 173 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 DEFA4P12838 97 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 ZNF22P17026 224 aaPredicted RBP2.5□□□□□ -2.01
SKP1-209ENST00000522552 GNG4P50150 75 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 TMEM155Q4W5P6 130 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 IZUMO2Q6UXV1 221 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 DPPA3Q6W0C5 159 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 TEN1Q86WV5 123 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 ACBD7Q8N6N7 88 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 CCDC167Q9P0B6 97 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 KIF25-AS1Q9Y6Z4 181 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 WDR97A6NE52 1622 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 KDM6AO15550 1401 aaPredicted RBP2.5□□□□□ -2.01
SKP1-209ENST00000522552 NAIPQ13075 1403 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 A0A0G2JMM0 328 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 A0A1W2PPB8 328 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 TMEM235A6NFC5 223 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 KIR3DP1A8MWS1 328 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 CCDC179H3BU77 68 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 CDC42EP2O14613 210 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 SNAPC5O75971 98 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 IFNA17P01571 189 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 HOXB6P17509 224 aaKnown RBP2.5□□□□□ -2.01
SKP1-209ENST00000522552 NFYAP23511 347 aaPredicted RBP2.5□□□□□ -2.01
SKP1-209ENST00000522552 COL8A2P25067 703 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 SNRPD3P62318 126 aaKnown RBP2.5□□□□□ -2.01
SKP1-209ENST00000522552 EBI3Q14213 229 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 C8orf59Q8N0T1 100 aaPredicted RBP2.5□□□□□ -2.01
SKP1-209ENST00000522552 Q8NAQ8 132 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 AQP3Q92482 292 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 MCEEQ96PE7 176 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 PKMYT1Q99640 499 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 FAM215AQ9Y5M1 114 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 DNAJC15Q9Y5T4 150 aa2.5□□□□□ -2.01
SKP1-209ENST00000522552 DLC1Q96QB1 1528 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 PRR14LQ5THK1 2151 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 TRAV7A0A075B6U4 112 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 A0A0D9SG52 128 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 TMEM218A2RU14 115 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 C7orf71A4D174 169 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 C11orf86A6NJI1 115 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 IFITM5A6NNB3 132 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 M0R143 59 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 HBDP02042 147 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 CRYGAP11844 174 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 PKIAP61925 76 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 RELAQ04206 551 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 KLRD1Q13241 179 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 CDK5R1Q15078 307 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 NCMAPQ5T1S8 102 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 LYPD6Q86Y78 171 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 OR4B1Q8NGF8 309 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 MRPS24Q96EL2 167 aaKnown RBP2.49□□□□□ -2.01
SKP1-209ENST00000522552 DPH3Q96FX2 82 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 CIB3Q96Q77 187 aaPredicted RBP2.49□□□□□ -2.01
SKP1-209ENST00000522552 TIMM9Q9Y5J7 89 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 S4R3C0 116 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 RGS12O14924 1447 aa2.49□□□□□ -2.01
SKP1-209ENST00000522552 TRPM1Q7Z4N2 1603 aa2.48□□□□□ -2.01
SKP1-209ENST00000522552 KIF13AQ9H1H9 1805 aa2.48□□□□□ -2.01
SKP1-209ENST00000522552 KDM5CP41229 1560 aa2.48□□□□□ -2.01
SKP1-209ENST00000522552 IGHV3OR16-8A0A075B7F1 116 aa2.48□□□□□ -2.01
SKP1-209ENST00000522552 TRGV5A0A0B4J1U4 118 aa2.48□□□□□ -2.01
SKP1-209ENST00000522552 A0A1B0GU33 70 aa2.48□□□□□ -2.01
SKP1-209ENST00000522552 SDCBPO00560 298 aaPredicted RBP2.48□□□□□ -2.01
SKP1-209ENST00000522552 TIMM17BO60830 172 aa2.48□□□□□ -2.01
SKP1-209ENST00000522552 ZNF93P35789 620 aaPredicted RBP2.48□□□□□ -2.01
SKP1-209ENST00000522552 Q6P435 159 aa2.48□□□□□ -2.01
SKP1-209ENST00000522552 LYZL1Q6UWQ5 148 aa2.48□□□□□ -2.01
SKP1-209ENST00000522552 BCL2L10Q9HD36 194 aa2.48□□□□□ -2.01
SKP1-209ENST00000522552 MINOS1-NBL1R4GNA1 71 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms