RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 C15orf32Q32M92 178 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 LGALSLQ3ZCW2 172 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-207ENST00000520168 SCGB2B2Q4G0G5 96 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 TMEM128Q5BJH2 165 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 FAAP20Q6NZ36 180 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 BTNL8Q6UX41 500 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 Q6ZRM9 215 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 H2BFWTQ7Z2G1 175 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 S100A7AQ86SG5 101 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 UBE2DNLQ8IWF7 75 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 OR11H4Q8NGC9 324 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 OR5AP2Q8NGF4 316 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 OR52L2PQ8NGH6 319 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 OR5H2Q8NGV7 314 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 OR10K1Q8NGX5 313 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 OR4A16Q8NH70 328 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 OR4A5Q8NH83 315 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 SFT2D1Q8WV19 159 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 NUDCD2Q8WVJ2 157 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 TCTEX1D2Q8WW35 142 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 ARHGAP5-AS1Q96IT6 56 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 TMEM56Q96MV1 263 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 SPIN2AQ99865 258 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 SPIN2BQ9BPZ2 258 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 MAP1LC3CQ9BXW4 147 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 PECRQ9BY49 303 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 SPANXB1Q9NS25 103 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-207ENST00000520168 SPANXCQ9NY87 97 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 UFC1Q9Y3C8 167 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 CSDC2Q9Y534 153 aaKnown RBP3.56□□□□□ -1.84
SDCBP-207ENST00000520168 TMEM56-RWDD3S4R434 201 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 NACAE9PAV3 2078 aa3.56□□□□□ -1.84
SDCBP-207ENST00000520168 VPS13BQ7Z7G8 4022 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 A0A0D9SG52 128 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 PDCD6O75340 191 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 OR2J3O76001 311 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 PMP2P02689 132 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 INAFM2P0DMQ5 153 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 SLC25A4P12235 298 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 RPL35AP18077 110 aaKnown RBP3.55□□□□□ -1.84
SDCBP-207ENST00000520168 S100A11P31949 105 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 AKR1C3P42330 323 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 CRYBA4P53673 196 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 FAM3BP58499 235 aaPredicted RBP3.55□□□□□ -1.84
SDCBP-207ENST00000520168 OR2B8PP59922 312 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 UBE2KP61086 200 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 DEFA5Q01523 94 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 TMEM187Q14656 261 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 HMGN3Q15651 99 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 ODF3L2Q3SX64 289 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 RPL39P5Q59GN2 51 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 Q5BKY6 102 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 TEX261Q6UWH6 196 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 CD164L2Q6UWJ8 174 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 DHRS11Q6UWP2 260 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 Q6ZS49 121 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 MOB1BQ7L9L4 216 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 LHFPL1Q86WI0 220 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 TTC9CQ8N5M4 171 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.55□□□□□ -1.84
SDCBP-207ENST00000520168 OR1L4Q8NGR5 311 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 OR13C8Q8NGS7 320 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 MRPL30Q8TCC3 161 aaKnown RBP3.55□□□□□ -1.84
SDCBP-207ENST00000520168 SRSF12Q8WXF0 261 aaKnown RBP3.55□□□□□ -1.84
SDCBP-207ENST00000520168 CMSS1Q9BQ75 279 aaKnown RBP3.55□□□□□ -1.84
SDCBP-207ENST00000520168 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.55□□□□□ -1.84
SDCBP-207ENST00000520168 COMMD9Q9P000 198 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 ZNF257Q9Y2Q1 563 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 U3KQ87 197 aa3.55□□□□□ -1.84
SDCBP-207ENST00000520168 DEFB131BA0A096LNP1 70 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 TRBV7-1A0A0A6YYK4 115 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 PIGBOS1A0A0B4J2F0 54 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 A0A1W2PP11 408 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 C15orf61A6NNL5 157 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 G3V3Q6 166 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 M0QXV9 152 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 CYB5BO43169 146 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 SFT2D2O95562 160 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 TMEM50AO95807 157 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 CA1P00915 261 aaPredicted RBP3.54□□□□□ -1.84
SDCBP-207ENST00000520168 IGLV2-23P01705 113 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 HLA-AP01891 365 aaKnown RBP3.54□□□□□ -1.84
SDCBP-207ENST00000520168 ORM1P02763 201 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 CTSDP07339 412 aaPredicted RBP3.54□□□□□ -1.84
SDCBP-207ENST00000520168 HIST1H1BP16401 226 aaKnown RBP3.54□□□□□ -1.84
SDCBP-207ENST00000520168 AKR1C4P17516 323 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 EDN2P20800 178 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 HLA-DMBP28068 263 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 DDTP30046 118 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 UCP3P55916 312 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 H2BFSP57053 126 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 RAB5BP61020 215 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 OPCMLQ14982 345 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 TNXAQ16473 311 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 VMA21Q3ZAQ7 101 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 ZNF585BQ52M93 769 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 Q6ZTC4 211 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 C6orf201Q7Z4U5 140 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 EIF4E3Q8N5X7 224 aaKnown RBP3.54□□□□□ -1.84
SDCBP-207ENST00000520168 TEX45Q8NA69 505 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms