RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 HELTA6NFD8 242 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 SOCS3O14543 225 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 FABP1P07148 127 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 PRB4P10163 310 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 ORM2P19652 201 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 CXCL2P19875 107 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 S100A11P31949 105 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 DEFB131AP59861 70 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 BAXQ07812 192 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 SPATA31B1PQ5VZV4 182 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 TEPPQ6URK8 271 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 STX12Q86Y82 276 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 OR1B1Q8NGR6 318 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 CSTL1Q9H114 145 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 CYTL1Q9NRR1 136 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 PLA2G2EQ9NZK7 142 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 PFDN2Q9UHV9 154 aa6.45□□□□□ -1.38
PDLIM5-213ENST00000509357 FXYD6-FXYD2A0A087WZ82 144 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 TRAV5A0A0B4J249 113 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 ZNF98A6NK75 572 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 K7EQG2 157 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 RLN2P04090 185 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 SNRPCP09234 159 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 CAMLGP49069 296 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 AP2S1P53680 142 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 STHQ8IWL8 128 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 PPP1R14BQ96C90 147 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 C20orf173Q96LM9 149 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 ATP5SQ99766 215 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 SLC25A39Q9BZJ4 359 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 SLC25A31Q9H0C2 315 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 ARL6Q9H0F7 186 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 TP53TG1Q9Y2A0 90 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 PXMP4Q9Y6I8 212 aa6.44□□□□□ -1.38
PDLIM5-213ENST00000509357 STARD9Q9P2P6 4700 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 TRAV2A0A0B4J234 112 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 TRAV8-2A0A0B4J237 113 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 A0A0J9YWU9 116 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 CXorf65A6NEN9 183 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 CA1P00915 261 aaPredicted RBP6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 ZNF688P0C7X2 276 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 HLA-DMBP28068 263 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 RPL29P47914 159 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 HBG1P69891 147 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 HBG2P69892 147 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 PMS2P11Q13670 270 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 ATP6V1FQ16864 119 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 RPL7L1Q6DKI1 246 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 ASB13Q8WXK3 278 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 RNF183Q96D59 192 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 ZNF503Q96F45 646 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 FAM167A-AS1Q96KT0 104 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 SHANK2-AS3Q9BTD1 123 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 SH3BGRL3Q9H299 93 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 ARV1Q9H2C2 271 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 SLC39A9Q9NUM3 307 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 CSMD3Q7Z407 3707 aa6.43□□□□□ -1.38
PDLIM5-213ENST00000509357 RYR2Q92736 4967 aa6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 ARPC5O15511 151 aa6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 JTBO76095 146 aa6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 PET100P0DJ07 73 aa6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 NUP62P37198 522 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 B2MP61769 119 aa6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 SNRPD3P62318 126 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 ACTL10Q5JWF8 245 aa6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 IGFL4Q6B9Z1 124 aa6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 SIGLEC15Q6ZMC9 328 aa6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 SSX7Q7RTT5 188 aa6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 ZNF546Q86UE3 836 aa6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 RARRES2Q99969 163 aa6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 SLC25A22Q9H936 323 aa6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 SEPSECSQ9HD40 501 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-213ENST00000509357 PLECQ15149 4684 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 LCE6AA0A183 80 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 KNCNA6PVL3 124 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 H3BQ15 152 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 H3BTX0 84 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 SLC17A3O00476 420 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 HYPMO75409 117 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 OR5G3P0C626 314 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 ATP6V0CP27449 155 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 SELENOTP62341 195 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 LGALSLQ3ZCW2 172 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 PSMG4Q5JS54 123 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 GDF5OSQ5U4N7 250 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 MIR17HGQ75NE6 70 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 LINC00305Q7Z4B0 112 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 TCTE3Q8IZS6 198 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 OR11H2Q8NH07 326 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 GATAD1Q8WUU5 269 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 SLC25A2Q9BXI2 301 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 PARD6GQ9BYG4 376 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 HIGD1AQ9Y241 93 aa6.41□□□□□ -1.38
PDLIM5-213ENST00000509357 GIG44P09565 113 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-213ENST00000509357 IGLC2P0DOY2 106 aa6.4□□□□□ -1.38
PDLIM5-213ENST00000509357 PYYP10082 97 aa6.4□□□□□ -1.38
PDLIM5-213ENST00000509357 RAB2AP61019 212 aa6.4□□□□□ -1.38
PDLIM5-213ENST00000509357 FGL1Q08830 312 aa6.4□□□□□ -1.38
PDLIM5-213ENST00000509357 OR8I2Q8N0Y5 310 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms