RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 ACTL10Q5JWF8 245 aa11.76□□□□□ -0.53
LMNA-222ENST00000508500 RPP25LQ8N5L8 163 aaKnown RBP11.76□□□□□ -0.53
LMNA-222ENST00000508500 ARL6Q9H0F7 186 aa11.76□□□□□ -0.53
LMNA-222ENST00000508500 LYRM2Q9NU23 88 aaPredicted RBP11.76□□□□□ -0.53
LMNA-222ENST00000508500 KANTRA0A1W2PQU2 76 aa11.75□□□□□ -0.53
LMNA-222ENST00000508500 ZNF705EA8MWA4 302 aaPredicted RBP11.75□□□□□ -0.53
LMNA-222ENST00000508500 AP2S1P53680 142 aaPredicted RBP11.75□□□□□ -0.53
LMNA-222ENST00000508500 EIF5AP63241 154 aaKnown RBP11.75□□□□□ -0.53
LMNA-222ENST00000508500 RPP30P78346 268 aaKnown RBP11.75□□□□□ -0.53
LMNA-222ENST00000508500 PSMG4Q5JS54 123 aa11.75□□□□□ -0.53
LMNA-222ENST00000508500 SLC51BQ86UW2 128 aa11.75□□□□□ -0.53
LMNA-222ENST00000508500 CLEC5AQ9NY25 188 aa11.75□□□□□ -0.53
LMNA-222ENST00000508500 FBXL17Q9UF56 701 aa11.75□□□□□ -0.53
LMNA-222ENST00000508500 IGHV4-28A0A0C4DH34 117 aa11.74□□□□□ -0.53
LMNA-222ENST00000508500 BCL2L11O43521 198 aa11.74□□□□□ -0.53
LMNA-222ENST00000508500 SSSCA1O60232 199 aa11.74□□□□□ -0.53
LMNA-222ENST00000508500 IFNA4P05014 189 aa11.74□□□□□ -0.53
LMNA-222ENST00000508500 SPP1P10451 314 aa11.74□□□□□ -0.53
LMNA-222ENST00000508500 MORN3Q6PF18 240 aaPredicted RBP11.74□□□□□ -0.53
LMNA-222ENST00000508500 SIGLEC15Q6ZMC9 328 aa11.74□□□□□ -0.53
LMNA-222ENST00000508500 RNF125Q96EQ8 232 aa11.74□□□□□ -0.53
LMNA-222ENST00000508500 ARPC5LQ9BPX5 153 aa11.74□□□□□ -0.53
LMNA-222ENST00000508500 IGKV1OR2-108A0A075B7D4 117 aa11.73□□□□□ -0.53
LMNA-222ENST00000508500 ELOA3CA0A087WX78 387 aaPredicted RBP11.73□□□□□ -0.53
LMNA-222ENST00000508500 IAPPP10997 89 aa11.73□□□□□ -0.53
LMNA-222ENST00000508500 GPX4P36969 197 aaPredicted RBP11.73□□□□□ -0.53
LMNA-222ENST00000508500 PAX9P55771 341 aa11.73□□□□□ -0.53
LMNA-222ENST00000508500 DEFB1P60022 68 aa11.73□□□□□ -0.53
LMNA-222ENST00000508500 MAGT1Q9H0U3 335 aa11.73□□□□□ -0.53
LMNA-222ENST00000508500 NRN1Q9NPD7 142 aa11.73□□□□□ -0.53
LMNA-222ENST00000508500 PSENENQ9NZ42 101 aa11.73□□□□□ -0.53
LMNA-222ENST00000508500 PRSS46E5RG02 174 aa11.72□□□□□ -0.53
LMNA-222ENST00000508500 RGS13O14921 159 aa11.72□□□□□ -0.53
LMNA-222ENST00000508500 TMEM41BQ5BJD5 291 aa11.72□□□□□ -0.53
LMNA-222ENST00000508500 GDF5OSQ5U4N7 250 aa11.72□□□□□ -0.53
LMNA-222ENST00000508500 LGALS9CQ6DKI2 356 aa11.72□□□□□ -0.53
LMNA-222ENST00000508500 ZNF767PQ75MW2 155 aa11.72□□□□□ -0.53
LMNA-222ENST00000508500 STX12Q86Y82 276 aa11.72□□□□□ -0.53
LMNA-222ENST00000508500 TMEM252Q8N6L7 170 aa11.72□□□□□ -0.53
LMNA-222ENST00000508500 PBDC1Q9BVG4 233 aa11.72□□□□□ -0.53
LMNA-222ENST00000508500 SEPSECSQ9HD40 501 aaKnown RBP11.72□□□□□ -0.53
LMNA-222ENST00000508500 BOLA1Q9Y3E2 137 aa11.72□□□□□ -0.53
LMNA-222ENST00000508500 ZFP92A6NM28 416 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 H3BMM0 161 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 MIFP14174 115 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 SULT1A1P50225 295 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 CAV2P51636 162 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 PRR20EP86478 221 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 PRR20CP86479 221 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 PRR20DP86480 221 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 PRR20BP86481 221 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 PRR20AP86496 221 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 STOML3Q8TAV4 291 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 SLC35E1Q96K37 410 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 HRH4Q9H3N8 390 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 APLNQ9ULZ1 77 aa11.71□□□□□ -0.53
LMNA-222ENST00000508500 SOCS3O14543 225 aa11.7□□□□□ -0.54
LMNA-222ENST00000508500 IFNA7P01567 189 aa11.7□□□□□ -0.54
LMNA-222ENST00000508500 HBG1P69891 147 aa11.7□□□□□ -0.54
LMNA-222ENST00000508500 HBG2P69892 147 aa11.7□□□□□ -0.54
LMNA-222ENST00000508500 ATP6V1FQ16864 119 aa11.7□□□□□ -0.54
LMNA-222ENST00000508500 OR8G2PQ6IF36 304 aa11.7□□□□□ -0.54
LMNA-222ENST00000508500 TMEM14EPQ6UXP3 125 aa11.7□□□□□ -0.54
LMNA-222ENST00000508500 THAP8Q8NA92 274 aa11.7□□□□□ -0.54
LMNA-222ENST00000508500 PHYHIPLQ96FC7 376 aa11.7□□□□□ -0.54
LMNA-222ENST00000508500 C17orf77Q96MU5 243 aa11.7□□□□□ -0.54
LMNA-222ENST00000508500 STRAPQ9Y3F4 350 aaKnown RBP11.7□□□□□ -0.54
LMNA-222ENST00000508500 HERC2O95714 4834 aa11.7□□□□□ -0.54
LMNA-222ENST00000508500 BORCS7-ASMTA0A0B4J1R7 106 aa11.69□□□□□ -0.54
LMNA-222ENST00000508500 FAM24AA6NFZ4 105 aa11.69□□□□□ -0.54
LMNA-222ENST00000508500 HLA-DMBP28068 263 aa11.69□□□□□ -0.54
LMNA-222ENST00000508500 SNRPD3P62318 126 aaKnown RBP11.69□□□□□ -0.54
LMNA-222ENST00000508500 ZNF266Q14584 549 aa11.69□□□□□ -0.54
LMNA-222ENST00000508500 TMEM182Q6ZP80 229 aaPredicted RBP11.69□□□□□ -0.54
LMNA-222ENST00000508500 C2CD4CQ8TF44 421 aa11.69□□□□□ -0.54
LMNA-222ENST00000508500 TRGV9Q99603 122 aa11.69□□□□□ -0.54
LMNA-222ENST00000508500 CELA1Q9UNI1 258 aa11.69□□□□□ -0.54
LMNA-222ENST00000508500 IGSF23A1L1A6 192 aa11.68□□□□□ -0.54
LMNA-222ENST00000508500 TPT1P13693 172 aaKnown RBP11.68□□□□□ -0.54
LMNA-222ENST00000508500 HLA-DRB4P13762 266 aa11.68□□□□□ -0.54
LMNA-222ENST00000508500 LYZP61626 148 aa11.68□□□□□ -0.54
LMNA-222ENST00000508500 RAB11AP62491 216 aa11.68□□□□□ -0.54
LMNA-222ENST00000508500 IFITM2Q01629 132 aa11.68□□□□□ -0.54
LMNA-222ENST00000508500 EIF5AL1Q6IS14 154 aaKnown RBP11.68□□□□□ -0.54
LMNA-222ENST00000508500 TEX261Q6UWH6 196 aa11.68□□□□□ -0.54
LMNA-222ENST00000508500 Q6ZTC4 211 aa11.68□□□□□ -0.54
LMNA-222ENST00000508500 XCL2Q9UBD3 114 aa11.68□□□□□ -0.54
LMNA-222ENST00000508500 HLA-DRB4X5D2U9 266 aa11.68□□□□□ -0.54
LMNA-222ENST00000508500 SPANXN5Q5MJ07 72 aa11.67□□□□□ -0.54
LMNA-222ENST00000508500 GGACTQ9BVM4 153 aa11.67□□□□□ -0.54
LMNA-222ENST00000508500 ZNF471Q9BX82 626 aaPredicted RBP11.67□□□□□ -0.54
LMNA-222ENST00000508500 PARD6GQ9BYG4 376 aaPredicted RBP11.67□□□□□ -0.54
LMNA-222ENST00000508500 CYTL1Q9NRR1 136 aa11.67□□□□□ -0.54
LMNA-222ENST00000508500 PAIP2BQ9ULR5 123 aaKnown RBP11.67□□□□□ -0.54
LMNA-222ENST00000508500 IGLL5B9A064 214 aa11.66□□□□□ -0.54
LMNA-222ENST00000508500 GATA2P23769 480 aaPredicted RBP11.66□□□□□ -0.54
LMNA-222ENST00000508500 FXYD7P58549 80 aa11.66□□□□□ -0.54
LMNA-222ENST00000508500 NHLH2Q02577 135 aa11.66□□□□□ -0.54
LMNA-222ENST00000508500 C1orf194Q5T5A4 169 aa11.66□□□□□ -0.54
LMNA-222ENST00000508500 BAP18Q8IXM2 172 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms