RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 PRSS22Q9GZN4 317 aa13.77□□□□□ -0.21
SFXN1-208ENST00000507823 GATCO43716 136 aaKnown RBP13.76□□□□□ -0.21
SFXN1-208ENST00000507823 MT-ND6P03923 174 aa13.76□□□□□ -0.21
SFXN1-208ENST00000507823 PYY3Q5JQD4 70 aa13.76□□□□□ -0.21
SFXN1-208ENST00000507823 C19orf71A6NCJ1 209 aa13.76□□□□□ -0.21
SFXN1-208ENST00000507823 IZUMO1RA6ND01 250 aa13.76□□□□□ -0.21
SFXN1-208ENST00000507823 OR2T8A6NH00 312 aa13.76□□□□□ -0.21
SFXN1-208ENST00000507823 CBLN1P23435 193 aa13.76□□□□□ -0.21
SFXN1-208ENST00000507823 ECSCRQ19T08 205 aa13.76□□□□□ -0.21
SFXN1-208ENST00000507823 CT83Q5H943 113 aa13.76□□□□□ -0.21
SFXN1-208ENST00000507823 WDR73Q6P4I2 378 aa13.76□□□□□ -0.21
SFXN1-208ENST00000507823 RASL11AQ6T310 242 aa13.76□□□□□ -0.21
SFXN1-208ENST00000507823 ARL6IP6Q8N6S5 226 aa13.76□□□□□ -0.21
SFXN1-208ENST00000507823 OR10D4PQ8NGN7 298 aa13.76□□□□□ -0.21
SFXN1-208ENST00000507823 LINC01548A6NM66 108 aa13.75□□□□□ -0.21
SFXN1-208ENST00000507823 IGHV4-38-2P0DP08 117 aa13.75□□□□□ -0.21
SFXN1-208ENST00000507823 SLC25A16P16260 332 aa13.75□□□□□ -0.21
SFXN1-208ENST00000507823 RHOGP84095 191 aa13.75□□□□□ -0.21
SFXN1-208ENST00000507823 C15orf32Q32M92 178 aa13.75□□□□□ -0.21
SFXN1-208ENST00000507823 Q86TA4 180 aa13.75□□□□□ -0.21
SFXN1-208ENST00000507823 EXOC3-AS1Q8N2X6 119 aa13.75□□□□□ -0.21
SFXN1-208ENST00000507823 WIPF2Q8TF74 440 aaPredicted RBP13.75□□□□□ -0.21
SFXN1-208ENST00000507823 GATA3P23771 443 aa13.75□□□□□ -0.21
SFXN1-208ENST00000507823 TMEM75Q8N9X5 138 aa13.75□□□□□ -0.21
SFXN1-208ENST00000507823 C17orf77Q96MU5 243 aa13.75□□□□□ -0.21
SFXN1-208ENST00000507823 MRPL18Q9H0U6 180 aaKnown RBP13.75□□□□□ -0.21
SFXN1-208ENST00000507823 B4DSR2 109 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 BRI3O95415 125 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 AMBPP02760 352 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 FRMD6-AS1P0C7T7 363 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 PDZD11Q5EBL8 140 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 TMEM136Q6ZRR5 245 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 CMTM2Q8TAZ6 248 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 A0A096LNT2 108 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 IGHV3-23P01764 117 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 FABP4P15090 132 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 S100A7P31151 101 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 BRD3OSQ6XYD6 125 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 TSKUQ8WUA8 353 aa13.74□□□□□ -0.21
SFXN1-208ENST00000507823 IGHV3OR16-10A0A075B7F0 116 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 G3V318 75 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 IER3P46695 156 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 ZFAND3Q9H8U3 227 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 SERTAD4Q9NUC0 356 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 TRAV20A0A0B4J274 112 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 A6NDX4 124 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 NPIPB6E9PJ23 425 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 ZNF253O75346 499 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 RPL7P18124 248 aaKnown RBP13.73□□□□□ -0.21
SFXN1-208ENST00000507823 C16orf54Q6UWD8 224 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 PACRGQ96M98 296 aaPredicted RBP13.73□□□□□ -0.21
SFXN1-208ENST00000507823 CCDC140Q96MF4 163 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 NIT2Q9NQR4 276 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 RABAC1Q9UI14 185 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 RPH3ALQ9UNE2 315 aa13.73□□□□□ -0.21
SFXN1-208ENST00000507823 LINC00322Q6ZN03 302 aaPredicted RBP13.72□□□□□ -0.21
SFXN1-208ENST00000507823 TRBV7-1A0A0A6YYK4 115 aa13.72□□□□□ -0.21
SFXN1-208ENST00000507823 SNURFLB1AK76 121 aa13.72□□□□□ -0.21
SFXN1-208ENST00000507823 IGF1P05019 195 aa13.72□□□□□ -0.21
SFXN1-208ENST00000507823 COX6B1P14854 86 aa13.72□□□□□ -0.21
SFXN1-208ENST00000507823 GOLT1AQ6ZVE7 132 aa13.72□□□□□ -0.21
SFXN1-208ENST00000507823 TMEM219Q86XT9 240 aa13.72□□□□□ -0.21
SFXN1-208ENST00000507823 MYO18BQ8IUG5 2567 aa13.72□□□□□ -0.21
SFXN1-208ENST00000507823 SH2D7A6NKC9 451 aaPredicted RBP13.71□□□□□ -0.21
SFXN1-208ENST00000507823 BMPR1BO00238 502 aa13.71□□□□□ -0.21
SFXN1-208ENST00000507823 CA1P00915 261 aaPredicted RBP13.71□□□□□ -0.21
SFXN1-208ENST00000507823 TCL1AP56279 114 aa13.71□□□□□ -0.21
SFXN1-208ENST00000507823 GBGT1Q8N5D6 347 aa13.71□□□□□ -0.21
SFXN1-208ENST00000507823 SGK494Q96LW2 274 aa13.71□□□□□ -0.21
SFXN1-208ENST00000507823 NAT8BQ9UHF3 227 aa13.71□□□□□ -0.21
SFXN1-208ENST00000507823 ZFP30Q9Y2G7 519 aa13.71□□□□□ -0.21
SFXN1-208ENST00000507823 UBR5O95071 2799 aaPredicted RBP13.71□□□□□ -0.21
SFXN1-208ENST00000507823 SERTM2A0A1B0GWG4 89 aa13.71□□□□□ -0.22
SFXN1-208ENST00000507823 DIRC3C9JPN6 131 aa13.71□□□□□ -0.22
SFXN1-208ENST00000507823 ESDP10768 282 aa13.71□□□□□ -0.22
SFXN1-208ENST00000507823 EEF1AKMT3Q96AZ1 226 aa13.71□□□□□ -0.22
SFXN1-208ENST00000507823 RPP21Q9H633 154 aaKnown RBP13.71□□□□□ -0.22
SFXN1-208ENST00000507823 ZNF462Q96JM2 2506 aa13.71□□□□□ -0.22
SFXN1-208ENST00000507823 TRAV41A0A0B4J266 112 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 HLA-DQA1P01909 254 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 GPR183P32249 361 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 PSG9Q00887 426 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 Q0VG73 95 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 TOMM20LQ6UXN7 152 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 NUP35Q8NFH5 326 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 NRGNQ92686 78 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 SPG11Q96JI7 2443 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 FAM223BA6NKX1 122 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 ZNF785A8K8V0 405 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 CLEC3BP05452 202 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 RAB9AP51151 201 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 ATP5L2Q7Z4Y8 100 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 FAM223AQ8IWN6 122 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 GFRA4Q9GZZ7 299 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 HIF1ANQ9NWT6 349 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 TP53TG3Q9ULZ0 132 aa13.7□□□□□ -0.22
SFXN1-208ENST00000507823 ZFYVE26Q68DK2 2539 aa13.69□□□□□ -0.22
SFXN1-208ENST00000507823 FAM231BA6NCW3 169 aa13.69□□□□□ -0.22
SFXN1-208ENST00000507823 PSG3Q16557 428 aa13.69□□□□□ -0.22
SFXN1-208ENST00000507823 PRR27Q6MZM9 219 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms