RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 U3KQK5 164 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 NCR2O95944 276 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 IGLV1-44P01699 117 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 CRYGCP07315 174 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 KIR2DL2P43627 348 aaPredicted RBP12.73□□□□□ -0.37
SCLT1-208ENST00000506368 ATP1A1-AS1Q5TC04 95 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 PVRIGQ6DKI7 326 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 C8orf46Q8TAG6 207 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 RAXQ9Y2V3 346 aa12.73□□□□□ -0.37
SCLT1-208ENST00000506368 OVOL3O00110 214 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 KLK10O43240 276 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 SNAI2O43623 268 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 THBDP07204 575 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 HLA-DRB4P13762 266 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 AZU1P20160 251 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 BHLHA15Q7RTS1 189 aaPredicted RBP12.72□□□□□ -0.37
SCLT1-208ENST00000506368 MTURNQ8N3F0 131 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 LEAP2Q969E1 77 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 ZNF414Q96IQ9 312 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 VGLL1Q99990 258 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 SPATA25Q9BR10 227 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 HLA-DRB4X5D2U9 266 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 TPRP12270 2363 aaKnown RBP12.72□□□□□ -0.37
SCLT1-208ENST00000506368 BOD1L1Q8NFC6 3051 aa12.72□□□□□ -0.37
SCLT1-208ENST00000506368 PPIAL4CA0A0B4J2A2 164 aa12.71□□□□□ -0.37
SCLT1-208ENST00000506368 K7EQM0 130 aa12.71□□□□□ -0.37
SCLT1-208ENST00000506368 CECR9P0C854 216 aa12.71□□□□□ -0.37
SCLT1-208ENST00000506368 TMEM75Q8N9X5 138 aa12.71□□□□□ -0.37
SCLT1-208ENST00000506368 MDS2Q8NDY4 140 aa12.71□□□□□ -0.37
SCLT1-208ENST00000506368 OR8A1Q8NGG7 326 aa12.71□□□□□ -0.37
SCLT1-208ENST00000506368 VSTM5A8MXK1 200 aa12.71□□□□□ -0.38
SCLT1-208ENST00000506368 GNG7O60262 68 aa12.71□□□□□ -0.38
SCLT1-208ENST00000506368 CD46P15529 392 aa12.71□□□□□ -0.38
SCLT1-208ENST00000506368 SSBP2P81877 361 aaPredicted RBP12.71□□□□□ -0.38
SCLT1-208ENST00000506368 SRSF1Q07955 248 aaKnown RBP eCLIP12.71□□□□□ -0.38
SCLT1-208ENST00000506368 FLYWCH2Q96CP2 140 aaKnown RBP12.71□□□□□ -0.38
SCLT1-208ENST00000506368 HILPDAQ9Y5L2 63 aa12.71□□□□□ -0.38
SCLT1-208ENST00000506368 INSIG2Q9Y5U4 225 aa12.71□□□□□ -0.38
SCLT1-208ENST00000506368 NBEAQ8NFP9 2946 aa12.7□□□□□ -0.38
SCLT1-208ENST00000506368 A0A096LNJ9 63 aa12.7□□□□□ -0.38
SCLT1-208ENST00000506368 FBLL1A6NHQ2 334 aaKnown RBP12.7□□□□□ -0.38
SCLT1-208ENST00000506368 ORM2P19652 201 aa12.7□□□□□ -0.38
SCLT1-208ENST00000506368 RPL24P83731 157 aaKnown RBP12.7□□□□□ -0.38
SCLT1-208ENST00000506368 OR4C13Q8NGP0 309 aa12.7□□□□□ -0.38
SCLT1-208ENST00000506368 ACACBO00763 2458 aa12.7□□□□□ -0.38
SCLT1-208ENST00000506368 TEX48A0A1B0GUV7 120 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 GAGE12HA6NDE8 117 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 GATA4P43694 442 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 CACNG7P62955 275 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 WT1-ASQ06250 92 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 FOXE3Q13461 319 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 TCTEX1D4Q5JR98 221 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 ORMDL3Q8N138 153 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 RAB37Q96AX2 223 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 SGK494Q96LW2 274 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 TIMM8BQ9Y5J9 83 aaPredicted RBP12.69□□□□□ -0.38
SCLT1-208ENST00000506368 DOCK10Q96BY6 2186 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 MAP1BP46821 2468 aaKnown RBP12.69□□□□□ -0.38
SCLT1-208ENST00000506368 NKX2-8O15522 239 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 ARMS2P0C7Q2 107 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 LINC00696Q6ZRV3 163 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 LYPD1Q8N2G4 141 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 TMEM116Q8NCL8 245 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 SRSF12Q8WXF0 261 aaKnown RBP12.69□□□□□ -0.38
SCLT1-208ENST00000506368 IFI27L1Q96BM0 104 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 ZC2HC1AQ96GY0 325 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 SPRR3Q9UBC9 169 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 DKK4Q9UBT3 224 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 DYSFO75923 2080 aa12.69□□□□□ -0.38
SCLT1-208ENST00000506368 MED13Q9UHV7 2174 aa12.68□□□□□ -0.38
SCLT1-208ENST00000506368 IGHV3OR15-7A0A075B7D8 119 aa12.68□□□□□ -0.38
SCLT1-208ENST00000506368 IGLV2-11P01706 119 aa12.68□□□□□ -0.38
SCLT1-208ENST00000506368 IFI27P40305 119 aaPredicted RBP12.68□□□□□ -0.38
SCLT1-208ENST00000506368 PPIAL4EA0A075B759 164 aa12.68□□□□□ -0.38
SCLT1-208ENST00000506368 hADV38S2A0JD32 116 aa12.68□□□□□ -0.38
SCLT1-208ENST00000506368 PPIAL4FP0DN26 164 aa12.68□□□□□ -0.38
SCLT1-208ENST00000506368 TAL2Q16559 108 aa12.68□□□□□ -0.38
SCLT1-208ENST00000506368 CIARTQ8N365 385 aaPredicted RBP12.68□□□□□ -0.38
SCLT1-208ENST00000506368 PLAUP00749 431 aa12.67□□□□□ -0.38
SCLT1-208ENST00000506368 UTF1Q5T230 341 aa12.67□□□□□ -0.38
SCLT1-208ENST00000506368 PRELID3AQ96N28 172 aa12.67□□□□□ -0.38
SCLT1-208ENST00000506368 TM2D2Q9BX73 214 aa12.67□□□□□ -0.38
SCLT1-208ENST00000506368 HIGD1AQ9Y241 93 aa12.67□□□□□ -0.38
SCLT1-208ENST00000506368 TANC2Q9HCD6 1990 aa12.67□□□□□ -0.38
SCLT1-208ENST00000506368 PAX8Q06710 450 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 VMA21Q3ZAQ7 101 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 FAM104BQ5XKR9 115 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 PRNTQ86SH4 94 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 MOGAT3Q86VF5 341 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 DEFB127Q9H1M4 99 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 FZR1Q9UM11 496 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 LINC00312Q9Y6C7 94 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 AGFG2O95081 481 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 NMUP48645 174 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 MEF2CQ06413 473 aaPredicted RBP12.66□□□□□ -0.38
SCLT1-208ENST00000506368 C8orf31Q8N9H6 132 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 RNF7Q9UBF6 113 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 SH3BGRL2Q9UJC5 107 aa12.66□□□□□ -0.38
SCLT1-208ENST00000506368 PTPRQQ9UMZ3 2332 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms