RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 TMPRSS3P57727 454 aa6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 YPEL3P61236 119 aaPredicted RBP6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 ODF3L1Q8IXM7 274 aa6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 ZBTB34Q8NCN2 500 aa6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 MAP1LC3AQ9H492 121 aa6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 SAA2-SAA4A0A096LPE2 208 aa6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 PMS2P5A8MQ11 134 aa6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 SAA2P0DJI9 122 aaPredicted RBP6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 CCL1P22362 96 aa6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 SEC11AP67812 179 aa6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 MZT1Q08AG7 82 aa6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 Q0VG73 95 aa6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 C20orf78Q9BR46 151 aa6.38□□□□□ -1.39
ATP2C1-208ENST00000504948 PRR33A8MZF0 331 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 ECSCRQ19T08 205 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 Q6ZPA2 131 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 TMEM178AQ8NBL3 297 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 AGRNO00468 2067 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 PLXNB3Q9ULL4 1909 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 IGKV2-40A0A087WW87 121 aaPredicted RBP6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 GFRA3O60609 400 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 IGKV2D-40P01614 121 aaPredicted RBP6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 SAA1P0DJI8 122 aaPredicted RBP6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 SMIM17P0DL12 118 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 GAGE2BQ13066 116 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 GAGE2EQ4V326 116 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 Q6ZR03 302 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 DEFB125Q8N687 156 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 PYGO2Q9BRQ0 406 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 CXXC4Q9H2H0 198 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 IFI27L2Q9H2X8 130 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 FBXL15Q9H469 300 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 UBE2ZQ9H832 354 aaPredicted RBP6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 GAGE2DQ9UEU5 116 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 EPDR1Q9UM22 224 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 FOXA2Q9Y261 457 aaPredicted RBP6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 ZFHX4Q86UP3 3567 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 IGKV3OR2-268A0A0C4DH90 116 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 PINLYPA6NC86 204 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 LAMTOR5O43504 91 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 CRYGSP22914 178 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 DUTP33316 252 aaKnown RBP6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 KHDC1LQ5JSQ8 128 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 CHAC1Q9BUX1 264 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 DUSP23Q9BVJ7 150 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 MRPL20Q9BYC9 149 aaKnown RBP6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 HIVEP3Q5T1R4 2406 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 FXYD2P54710 66 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 SSBP2P81877 361 aaPredicted RBP6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 RBPJQ06330 500 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 C10orf128Q5T292 105 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 DUX4L9Q6RFH8 374 aaPredicted RBP6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 C6orf15Q6UXA7 325 aaPredicted RBP6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 SPATA12Q7Z6I5 190 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 ORMDL3Q8N138 153 aa6.37□□□□□ -1.39
ATP2C1-208ENST00000504948 ZNF503-AS2A6NEH8 195 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 C9orf118A6NHY6 69 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 FAM106CPP0CH98 169 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 NXPH1P58417 271 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 FAM106AQ4KMX7 169 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 SFXN3Q9BWM7 321 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 TRAV2A0A0B4J234 112 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 A0A1W2PPM0 123 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 GATA1P15976 413 aaPredicted RBP6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 RPL27AP46776 148 aaKnown RBP6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 RHOGP84095 191 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 LYZL1Q6UWQ5 148 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 ZNF256Q9Y2P7 627 aaPredicted RBP6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 TRAV26-2A0A0B4J265 109 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 PPP1R32Q7Z5V6 425 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 ZNF714Q96N38 554 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 RAXQ9Y2V3 346 aa6.36□□□□□ -1.39
ATP2C1-208ENST00000504948 PSMB11A5LHX3 300 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 FAM90A27PA6NNH2 459 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 ZNF815PA8K554 130 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 K7EP34 96 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 INSL3P51460 131 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 PET117Q6UWS5 81 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 OR5A1Q8NGJ0 315 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 TMEM54Q969K7 222 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 SF3B5Q9BWJ5 86 aaKnown RBP6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 PTPRBP23467 1997 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 LINC01549A6NIU2 74 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 LTAP01374 205 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 HBDP02042 147 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 HERV-K104P63124 156 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 NEGR1Q7Z3B1 354 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 RAB9BQ9NP90 201 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 KMT2BQ9UMN6 2715 aaPredicted RBP6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 VSTM5A8MXK1 200 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 C9JCJ5 164 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 SMAD7O15105 426 aaKnown RBP6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 IGLC1P0CG04 106 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 EFNA4P52798 201 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 NRN1LQ496H8 165 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 C1orf210Q8IVY1 113 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 TTTY12Q9BZ98 90 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 PRSS29PA6NIE9 313 aa6.35□□□□□ -1.39
ATP2C1-208ENST00000504948 C9JAW5 83 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms