RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 LCN15Q6UWW0 184 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 TMEM14EPQ6UXP3 125 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 SOSTDC1Q6X4U4 206 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 BRD3OSQ6XYD6 125 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 AAED1Q7RTV5 226 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 LINC00471Q8N535 108 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 TEX29Q8N6K0 151 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 OR5H6Q8NGV6 325 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 OR4C6Q8NH72 309 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 CMTM2Q8TAZ6 248 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 BRK1Q8WUW1 75 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 NAT14Q8WUY8 206 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 AQP3Q92482 292 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 ARL11Q969Q4 196 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 TMEM203Q969S6 136 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 PRELID3AQ96N28 172 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 BCL2L10Q9HD36 194 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 TAS2R4Q9NYW5 299 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 SDK2Q58EX2 2172 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 RTL9Q8NET4 1388 aa1.21□□□□□ -2.22
HMGB1P35-201ENST00000503360 ARHGEF11O15085 1522 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 CEP164Q9UPV0 1460 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 IGKV3D-11A0A0A0MRZ8 115 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 A0A1W2PNN7 141 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 OR51F1A6NGY5 319 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 OR2T8A6NH00 312 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 LY6LH3BQJ8 138 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 K7ERJ3 54 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 UQCRQO14949 82 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 LYRM1O43325 122 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 TIMM17BO60830 172 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 NCR2O95944 276 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 IFNGP01579 166 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 PMP2P02689 132 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 BAALC-AS2P0C853 105 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 TRGC1P0CF51 173 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 IGLC6P0CF74 106 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 CRYGAP11844 174 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 DEFA4P12838 97 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 TPT1P13693 172 aaKnown RBP1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 CRYGSP22914 178 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 KDELR1P24390 212 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 RAB5CP51148 216 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 FOXA3P55318 350 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 TMEM258P61165 79 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 COPZ1P61923 177 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 RPS25P62851 125 aaKnown RBP1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 ERHP84090 104 aaKnown RBP1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 RELAQ04206 551 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 KLRD1Q13241 179 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 HSD17B12Q53GQ0 312 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 SPANXN5Q5MJ07 72 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 GLYATL3Q5SZD4 288 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 PATE2Q6UY27 113 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 Q6ZQT0 140 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 C7orf65Q6ZTY9 151 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 CTAGE3PQ8IX95 158 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 FAM216BQ8N7L0 139 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 MORN4Q8NDC4 146 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 OR8B3Q8NGG8 313 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZNF418Q8TF45 676 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 DIRC1Q969H9 104 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 TVP23CQ96ET8 276 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZC2HC1AQ96GY0 325 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 LINC00470Q9BZP3 86 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 LPAR5Q9H1C0 372 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 LY96Q9Y6Y9 160 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 PLXND1Q9Y4D7 1925 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 CACNA1DQ01668 2161 aa1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 RIMS1Q86UR5 1692 aaKnown RBP1.2□□□□□ -2.22
HMGB1P35-201ENST00000503360 ECM29Q5VYK3 1845 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 MYH11P35749 1972 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 SHROOM3Q8TF72 1996 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZNF518AQ6AHZ1 1483 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 RIMBP3CA6NJZ7 1639 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 RIMBP3BA6NNM3 1639 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 TRPM1Q7Z4N2 1603 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 RIMBP3Q9UFD9 1639 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 FCGBPQ9Y6R7 5405 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 IGLV3-9A0A075B6K5 115 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 MUC21A0A0G2JKD1 596 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 MUC21A0A140T8X8 626 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 A0A1W2PNM2 257 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 HMSDA8MTL9 139 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZNF727A8MUV8 499 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 ODF3BA8MYP8 253 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 FAM25AB3EWG3 89 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 FAM25CB3EWG5 89 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 FAM25GB3EWG6 89 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 C17orf112F2Z3M2 114 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 IGLV6-57P01721 117 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 CLPSP04118 112 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 CTSDP07339 412 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 LINC00694P0DN24 101 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 HINT1P49773 126 aaPredicted RBP1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 SMARCA2P51531 1590 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 EMX2Q04743 252 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 HES1Q14469 280 aa1.19□□□□□ -2.22
HMGB1P35-201ENST00000503360 ZNF345Q14585 488 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms