RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 C10orf113Q5VZT2 155 aa11.56□□□□□ -0.56
CPNE1-228ENST00000498814 LEMD1Q68G75 181 aa11.56□□□□□ -0.56
CPNE1-228ENST00000498814 LINC00305Q7Z4B0 112 aa11.56□□□□□ -0.56
CPNE1-228ENST00000498814 FAM24BQ8N5W8 94 aa11.56□□□□□ -0.56
CPNE1-228ENST00000498814 SCGB1C1Q8TD33 95 aa11.56□□□□□ -0.56
CPNE1-228ENST00000498814 CITED4Q96RK1 184 aa11.56□□□□□ -0.56
CPNE1-228ENST00000498814 PFDN5Q99471 154 aa11.56□□□□□ -0.56
CPNE1-228ENST00000498814 COL7A1Q02388 2944 aa11.56□□□□□ -0.56
CPNE1-228ENST00000498814 RNF222A6NCQ9 220 aa11.55□□□□□ -0.56
CPNE1-228ENST00000498814 C17orf112F2Z3M2 114 aa11.55□□□□□ -0.56
CPNE1-228ENST00000498814 RPL7P18124 248 aaKnown RBP11.55□□□□□ -0.56
CPNE1-228ENST00000498814 GATAD1Q8WUU5 269 aa11.55□□□□□ -0.56
CPNE1-228ENST00000498814 RBMY1BA6NDE4 496 aaKnown RBP11.54□□□□□ -0.56
CPNE1-228ENST00000498814 RBMY1EA6NEQ0 496 aaKnown RBP11.54□□□□□ -0.56
CPNE1-228ENST00000498814 RBMY1DP0C7P1 496 aaKnown RBP11.54□□□□□ -0.56
CPNE1-228ENST00000498814 MEOX2P50222 304 aa11.54□□□□□ -0.56
CPNE1-228ENST00000498814 DEFB131AP59861 70 aa11.54□□□□□ -0.56
CPNE1-228ENST00000498814 APRG1Q8IVJ8 170 aa11.54□□□□□ -0.56
CPNE1-228ENST00000498814 SBSPONQ8IVN8 264 aa11.54□□□□□ -0.56
CPNE1-228ENST00000498814 RSG1Q9BU20 258 aa11.54□□□□□ -0.56
CPNE1-228ENST00000498814 SMLR1H3BR10 107 aa11.53□□□□□ -0.56
CPNE1-228ENST00000498814 SOCS3O14543 225 aa11.53□□□□□ -0.56
CPNE1-228ENST00000498814 ZNF688P0C7X2 276 aa11.53□□□□□ -0.56
CPNE1-228ENST00000498814 NHLRC4P0CG21 123 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-228ENST00000498814 SNRPD3P62318 126 aaKnown RBP11.53□□□□□ -0.56
CPNE1-228ENST00000498814 ZNF266Q14584 549 aa11.53□□□□□ -0.56
CPNE1-228ENST00000498814 SAMD13Q5VXD3 122 aa11.53□□□□□ -0.56
CPNE1-228ENST00000498814 C17orf77Q96MU5 243 aa11.53□□□□□ -0.56
CPNE1-228ENST00000498814 ASCL2Q99929 193 aa11.53□□□□□ -0.56
CPNE1-228ENST00000498814 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-228ENST00000498814 MRPS12O15235 138 aaKnown RBP11.52□□□□□ -0.57
CPNE1-228ENST00000498814 ID1P41134 155 aa11.52□□□□□ -0.57
CPNE1-228ENST00000498814 ZNF124Q15973 351 aa11.52□□□□□ -0.57
CPNE1-228ENST00000498814 HAGHQ16775 308 aa11.52□□□□□ -0.57
CPNE1-228ENST00000498814 MORN5Q5VZ52 161 aa11.52□□□□□ -0.57
CPNE1-228ENST00000498814 DNAH9Q9NYC9 4486 aa11.52□□□□□ -0.57
CPNE1-228ENST00000498814 AGRNO00468 2067 aa11.51□□□□□ -0.57
CPNE1-228ENST00000498814 A0A087X0K7 114 aa11.51□□□□□ -0.57
CPNE1-228ENST00000498814 ISLRO14498 428 aa11.51□□□□□ -0.57
CPNE1-228ENST00000498814 ARPC5O15511 151 aa11.51□□□□□ -0.57
CPNE1-228ENST00000498814 ATF4P18848 351 aaPredicted RBP11.51□□□□□ -0.57
CPNE1-228ENST00000498814 PSMB3P49720 205 aa11.51□□□□□ -0.57
CPNE1-228ENST00000498814 GCSAMLQ5JQS6 135 aa11.51□□□□□ -0.57
CPNE1-228ENST00000498814 PSMG4Q5JS54 123 aa11.51□□□□□ -0.57
CPNE1-228ENST00000498814 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.51□□□□□ -0.57
CPNE1-228ENST00000498814 BPIFA4PQ86YQ2 179 aa11.51□□□□□ -0.57
CPNE1-228ENST00000498814 ST6GAL2Q96JF0 529 aa11.51□□□□□ -0.57
CPNE1-228ENST00000498814 MFFQ9GZY8 342 aa11.51□□□□□ -0.57
CPNE1-228ENST00000498814 TIMM9Q9Y5J7 89 aa11.51□□□□□ -0.57
CPNE1-228ENST00000498814 HMSDA8MTL9 139 aa11.5□□□□□ -0.57
CPNE1-228ENST00000498814 FFAR4Q5NUL3 377 aa11.5□□□□□ -0.57
CPNE1-228ENST00000498814 C16orf92Q96LL3 132 aa11.5□□□□□ -0.57
CPNE1-228ENST00000498814 TRAV5A0A0B4J249 113 aa11.49□□□□□ -0.57
CPNE1-228ENST00000498814 TAAR5O14804 337 aa11.49□□□□□ -0.57
CPNE1-228ENST00000498814 ZNF345Q14585 488 aa11.49□□□□□ -0.57
CPNE1-228ENST00000498814 FAM78BQ5VT40 261 aa11.49□□□□□ -0.57
CPNE1-228ENST00000498814 OR11H4Q8NGC9 324 aa11.49□□□□□ -0.57
CPNE1-228ENST00000498814 TM2D3Q9BRN9 247 aa11.49□□□□□ -0.57
CPNE1-228ENST00000498814 MRPL32Q9BYC8 188 aaKnown RBP11.49□□□□□ -0.57
CPNE1-228ENST00000498814 NBEAL2Q6ZNJ1 2754 aa11.49□□□□□ -0.57
CPNE1-228ENST00000498814 BORCS7-ASMTA0A0B4J1R7 106 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 KIR2DL5BA0A0G2JN68 375 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 KIR2DL5BA0A0G2JPC4 375 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 IGLC2P0DOY2 106 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 APOC4P55056 127 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 RPL7L1Q6DKI1 246 aaKnown RBP11.48□□□□□ -0.57
CPNE1-228ENST00000498814 TCTE3Q8IZS6 198 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 KIR2DL5AQ8N109 375 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 HSD17B11Q8NBQ5 300 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 KIR2DL5BQ8NHK3 375 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 LINC00052Q96N35 136 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 PSMG3Q9BT73 122 aaPredicted RBP11.48□□□□□ -0.57
CPNE1-228ENST00000498814 HRH4Q9H3N8 390 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 TMEM14CQ9P0S9 112 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 RFNGQ9Y644 331 aa11.48□□□□□ -0.57
CPNE1-228ENST00000498814 hCG_2014768A0A024R1R8 64 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 TRAV8-2A0A0B4J237 113 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 KNCNA6PVL3 124 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 RPL35AP18077 110 aaKnown RBP11.47□□□□□ -0.57
CPNE1-228ENST00000498814 CXCL2P19875 107 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 ATP6V0CP27449 155 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 SPATA31B1PQ5VZV4 182 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 LCN15Q6UWW0 184 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 MIR17HGQ75NE6 70 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 STHQ8IWL8 128 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 KCNRGQ8N5I3 272 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 OR2G3Q8NGZ4 309 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 ZMAT4Q9H898 229 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 FUT9Q9Y231 359 aa11.47□□□□□ -0.57
CPNE1-228ENST00000498814 TENM3Q9P273 2699 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 H3BQ15 152 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 UBE2CO00762 179 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 JTBO76095 146 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 M6PRP20645 277 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 SERF2P84101 59 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 GUK1Q16774 197 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 ACOT6Q3I5F7 207 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-228ENST00000498814 ACTL10Q5JWF8 245 aa11.46□□□□□ -0.57
CPNE1-228ENST00000498814 TRPT1Q86TN4 253 aaKnown RBP11.46□□□□□ -0.57
CPNE1-228ENST00000498814 GNPNAT1Q96EK6 184 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms