RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 GLMPQ8WWB7 406 aa15.08■□□□□ 0
CTSD-206ENST00000497544 SHANK2-AS3Q9BTD1 123 aa15.08■□□□□ 0
CTSD-206ENST00000497544 ZNF471Q9BX82 626 aaPredicted RBP15.08■□□□□ 0
CTSD-206ENST00000497544 HELTA6NFD8 242 aa15.07■□□□□ 0
CTSD-206ENST00000497544 H3BRN7 92 aa15.07■□□□□ 0
CTSD-206ENST00000497544 EIF5AP63241 154 aaKnown RBP15.07■□□□□ 0
CTSD-206ENST00000497544 PAFAH1B2P68402 229 aa15.07■□□□□ 0
CTSD-206ENST00000497544 PSMG3Q9BT73 122 aaPredicted RBP15.07■□□□□ 0
CTSD-206ENST00000497544 SCRT1Q9BWW7 348 aa15.07■□□□□ 0
CTSD-206ENST00000497544 RFNGQ9Y644 331 aa15.07■□□□□ 0
CTSD-206ENST00000497544 ZNF785A8K8V0 405 aa15.06■□□□□ 0
CTSD-206ENST00000497544 TSPAN4O14817 238 aa15.06■□□□□ 0
CTSD-206ENST00000497544 GP9P14770 177 aa15.06■□□□□ 0
CTSD-206ENST00000497544 C4BPBP20851 252 aa15.06■□□□□ 0
CTSD-206ENST00000497544 SERF2P84101 59 aa15.06■□□□□ 0
CTSD-206ENST00000497544 ACOT6Q3I5F7 207 aaPredicted RBP15.06■□□□□ 0
CTSD-206ENST00000497544 LEMD1Q68G75 181 aa15.06■□□□□ 0
CTSD-206ENST00000497544 SIGLEC15Q6ZMC9 328 aa15.06■□□□□ 0
CTSD-206ENST00000497544 ZNF256Q9Y2P7 627 aaPredicted RBP15.06■□□□□ 0
CTSD-206ENST00000497544 DNAH9Q9NYC9 4486 aa15.06■□□□□ 0
CTSD-206ENST00000497544 DNASE2O00115 360 aaPredicted RBP15.05■□□□□ -0
CTSD-206ENST00000497544 GCSAMLQ5JQS6 135 aa15.05■□□□□ -0
CTSD-206ENST00000497544 FAM78BQ5VT40 261 aa15.05■□□□□ -0
CTSD-206ENST00000497544 GBGT1Q8N5D6 347 aa15.05■□□□□ -0
CTSD-206ENST00000497544 GPR82Q96P67 336 aa15.05■□□□□ -0
CTSD-206ENST00000497544 SPAG8Q99932 426 aaPredicted RBP15.05■□□□□ -0
CTSD-206ENST00000497544 SLC25A32Q9H2D1 315 aa15.05■□□□□ -0
CTSD-206ENST00000497544 GALR1P47211 349 aa15.04■□□□□ -0
CTSD-206ENST00000497544 TFPI2P48307 235 aa15.04■□□□□ -0
CTSD-206ENST00000497544 KRTAP10-11P60412 298 aa15.04■□□□□ -0
CTSD-206ENST00000497544 WFDC3Q8IUB2 231 aa15.04■□□□□ -0
CTSD-206ENST00000497544 OR2G3Q8NGZ4 309 aa15.04■□□□□ -0
CTSD-206ENST00000497544 SH3BGRL3Q9H299 93 aa15.04■□□□□ -0
CTSD-206ENST00000497544 SACSQ9NZJ4 4579 aa15.03■□□□□ -0
CTSD-206ENST00000497544 MBP02144 154 aa15.03■□□□□ -0
CTSD-206ENST00000497544 RPL7P18124 248 aaKnown RBP15.03■□□□□ -0
CTSD-206ENST00000497544 M6PRP20645 277 aa15.03■□□□□ -0
CTSD-206ENST00000497544 NKX2-5P52952 324 aaPredicted RBP15.03■□□□□ -0
CTSD-206ENST00000497544 C9orf62Q8N4C0 152 aa15.03■□□□□ -0
CTSD-206ENST00000497544 STXBP6Q8NFX7 210 aa15.03■□□□□ -0
CTSD-206ENST00000497544 A0A1W2PPV4 95 aa15.02■□□□□ -0
CTSD-206ENST00000497544 OR4C46A6NHA9 309 aa15.02■□□□□ -0
CTSD-206ENST00000497544 TPT1P13693 172 aaKnown RBP15.02■□□□□ -0
CTSD-206ENST00000497544 MRPL32Q9BYC8 188 aaKnown RBP15.02■□□□□ -0
CTSD-206ENST00000497544 MS4A6AQ9H2W1 248 aa15.02■□□□□ -0
CTSD-206ENST00000497544 TRAV5A0A0B4J249 113 aa15.01□□□□□ -0.01
CTSD-206ENST00000497544 RHOBP62745 196 aa15.01□□□□□ -0.01
CTSD-206ENST00000497544 AKR1C8PQ5T2L2 129 aa15.01□□□□□ -0.01
CTSD-206ENST00000497544 MORN5Q5VZ52 161 aa15.01□□□□□ -0.01
CTSD-206ENST00000497544 GTSCR1Q86UQ5 136 aa15.01□□□□□ -0.01
CTSD-206ENST00000497544 BPIFA4PQ86YQ2 179 aa15.01□□□□□ -0.01
CTSD-206ENST00000497544 BAP18Q8IXM2 172 aa15.01□□□□□ -0.01
CTSD-206ENST00000497544 OR10G4Q8NGN3 311 aa15.01□□□□□ -0.01
CTSD-206ENST00000497544 OR10G9Q8NGN4 311 aa15.01□□□□□ -0.01
CTSD-206ENST00000497544 OR10G7Q8NGN6 311 aa15.01□□□□□ -0.01
CTSD-206ENST00000497544 PRR25Q96S07 402 aa15.01□□□□□ -0.01
CTSD-206ENST00000497544 SEPSECSQ9HD40 501 aaKnown RBP15.01□□□□□ -0.01
CTSD-206ENST00000497544 FUT9Q9Y231 359 aa15.01□□□□□ -0.01
CTSD-206ENST00000497544 SPP1P10451 314 aa15□□□□□ -0.01
CTSD-206ENST00000497544 ATF4P18848 351 aaPredicted RBP15□□□□□ -0.01
CTSD-206ENST00000497544 RAB2AP61019 212 aa15□□□□□ -0.01
CTSD-206ENST00000497544 SPATA31B1PQ5VZV4 182 aa15□□□□□ -0.01
CTSD-206ENST00000497544 MIR17HGQ75NE6 70 aa15□□□□□ -0.01
CTSD-206ENST00000497544 SLC51BQ86UW2 128 aa15□□□□□ -0.01
CTSD-206ENST00000497544 WWC2-AS2Q96NR7 200 aa15□□□□□ -0.01
CTSD-206ENST00000497544 NRN1Q9NPD7 142 aa15□□□□□ -0.01
CTSD-206ENST00000497544 TRAV2A0A0B4J234 112 aa14.99□□□□□ -0.01
CTSD-206ENST00000497544 SEC11BP0C7V7 166 aa14.99□□□□□ -0.01
CTSD-206ENST00000497544 TMEM41BQ5BJD5 291 aa14.99□□□□□ -0.01
CTSD-206ENST00000497544 FAM122CQ6P4D5 195 aa14.99□□□□□ -0.01
CTSD-206ENST00000497544 STOML3Q8TAV4 291 aa14.99□□□□□ -0.01
CTSD-206ENST00000497544 SMAD5-AS1Q9Y6J3 95 aa14.99□□□□□ -0.01
CTSD-206ENST00000497544 CMC4P56277 68 aaPredicted RBP14.98□□□□□ -0.01
CTSD-206ENST00000497544 TAS2R45P59539 299 aa14.98□□□□□ -0.01
CTSD-206ENST00000497544 CD81P60033 236 aa14.98□□□□□ -0.01
CTSD-206ENST00000497544 K7EQG2 157 aa14.97□□□□□ -0.01
CTSD-206ENST00000497544 CD7P09564 240 aa14.97□□□□□ -0.01
CTSD-206ENST00000497544 MEOX2P50222 304 aa14.97□□□□□ -0.01
CTSD-206ENST00000497544 EIF5AL1Q6IS14 154 aaKnown RBP14.97□□□□□ -0.01
CTSD-206ENST00000497544 LRRC20Q8TCA0 184 aa14.97□□□□□ -0.01
CTSD-206ENST00000497544 ACTR3CQ9C0K3 210 aaPredicted RBP14.97□□□□□ -0.01
CTSD-206ENST00000497544 RPRMQ9NS64 109 aa14.97□□□□□ -0.01
CTSD-206ENST00000497544 AURKAIP1Q9NWT8 199 aaPredicted RBP14.97□□□□□ -0.01
CTSD-206ENST00000497544 CDC34P49427 236 aaPredicted RBP14.96□□□□□ -0.01
CTSD-206ENST00000497544 DCANP1Q8TF63 244 aa14.96□□□□□ -0.01
CTSD-206ENST00000497544 SLC25A2Q9BXI2 301 aa14.96□□□□□ -0.01
CTSD-206ENST00000497544 OR51M1Q9H341 326 aa14.96□□□□□ -0.01
CTSD-206ENST00000497544 TMEM14CQ9P0S9 112 aa14.96□□□□□ -0.01
CTSD-206ENST00000497544 TENM2Q9NT68 2774 aa14.95□□□□□ -0.02
CTSD-206ENST00000497544 MRPS12O15235 138 aaKnown RBP14.95□□□□□ -0.02
CTSD-206ENST00000497544 OR7C2O60412 319 aa14.95□□□□□ -0.02
CTSD-206ENST00000497544 ID1P41134 155 aa14.95□□□□□ -0.02
CTSD-206ENST00000497544 KHDC3LQ587J8 217 aa14.95□□□□□ -0.02
CTSD-206ENST00000497544 SAMD13Q5VXD3 122 aa14.95□□□□□ -0.02
CTSD-206ENST00000497544 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.95□□□□□ -0.02
CTSD-206ENST00000497544 RPP25LQ8N5L8 163 aaKnown RBP14.95□□□□□ -0.02
CTSD-206ENST00000497544 FAM167A-AS1Q96KT0 104 aa14.95□□□□□ -0.02
CTSD-206ENST00000497544 C16orf92Q96LL3 132 aa14.95□□□□□ -0.02
CTSD-206ENST00000497544 PAXXQ9BUH6 204 aa14.95□□□□□ -0.02
CTSD-206ENST00000497544 BOLA1Q9Y3E2 137 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms