RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-218	ENST00000496197	RPRM	Q9NS64	109 aa		10.12	□□□□□ -0.79
PTPN7-218	ENST00000496197	TPT1	P13693	172 aa	Known RBP	10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	SERF2	P84101	59 aa		10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	ZNF726P1	Q15940	193 aa		10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	BEAN1	Q3B7T3	259 aa		10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	FAM122C	Q6P4D5	195 aa		10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	SLC51B	Q86UW2	128 aa		10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	OR8I2	Q8N0Y5	310 aa		10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	FAM24B	Q8N5W8	94 aa		10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	OR10G4	Q8NGN3	311 aa		10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	OR10G9	Q8NGN4	311 aa		10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	OR10G7	Q8NGN6	311 aa		10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	ZNF503	Q96F45	646 aa		10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	NARS2	Q96I59	477 aa	Known RBP	10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	FUT9	Q9Y231	359 aa		10.11	□□□□□ -0.79
PTPN7-218	ENST00000496197	TSPAN4	O14817	238 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	HMGB3	O15347	200 aa	Known RBP	10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	SEC11B	P0C7V7	166 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	PYY	P10082	97 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	GP9	P14770	177 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	TFPI2	P48307	235 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	FHIT	P49789	147 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	TMEM41B	Q5BJD5	291 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	C1orf194	Q5T5A4	169 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	OR2K2	Q8NGT1	345 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	GRAMD2B	Q96HH9	432 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	MS4A6A	Q9H2W1	248 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	TMEM231	Q9H6L2	316 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197		H3BTX0	84 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	PRB2	P02812	416 aa	Predicted RBP	10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	RPL11	P62913	178 aa	Known RBP	10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	KPRP	Q5T749	579 aa	Predicted RBP	10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	LCN12	Q6JVE5	192 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	WFDC3	Q8IUB2	231 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	STXBP6	Q8NFX7	210 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	DCANP1	Q8TF63	244 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	PRR25	Q96S07	402 aa		10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	MRPL32	Q9BYC8	188 aa	Known RBP	10.1	□□□□□ -0.79
PTPN7-218	ENST00000496197	DNAH3	Q8TD57	4116 aa		10.09	□□□□□ -0.79
PTPN7-218	ENST00000496197	SORL1	Q92673	2214 aa		10.09	□□□□□ -0.79
PTPN7-218	ENST00000496197		H3BQ15	152 aa		10.09	□□□□□ -0.79
PTPN7-218	ENST00000496197	CD7	P09564	240 aa		10.09	□□□□□ -0.79
PTPN7-218	ENST00000496197	BMI1	P35226	326 aa		10.09	□□□□□ -0.79
PTPN7-218	ENST00000496197	RHOB	P62745	196 aa		10.09	□□□□□ -0.79
PTPN7-218	ENST00000496197	GUCA2B	Q16661	112 aa		10.09	□□□□□ -0.79
PTPN7-218	ENST00000496197	FAM74A1	Q5RGS3	127 aa		10.09	□□□□□ -0.79
PTPN7-218	ENST00000496197	GPR61	Q9BZJ8	451 aa		10.09	□□□□□ -0.79
PTPN7-218	ENST00000496197	MGAM2	Q2M2H8	2515 aa		10.08	□□□□□ -0.8
PTPN7-218	ENST00000496197	TRAV25	A0A0B4J276	109 aa		10.08	□□□□□ -0.8
PTPN7-218	ENST00000496197	HELT	A6NFD8	242 aa		10.08	□□□□□ -0.8
PTPN7-218	ENST00000496197		K7EQG2	157 aa		10.08	□□□□□ -0.8
PTPN7-218	ENST00000496197	SOCS3	O14543	225 aa		10.08	□□□□□ -0.8
PTPN7-218	ENST00000496197	IGLC2	P0DOY2	106 aa		10.08	□□□□□ -0.8
PTPN7-218	ENST00000496197	CDC34	P49427	236 aa	Predicted RBP	10.08	□□□□□ -0.8
PTPN7-218	ENST00000496197	EIF5A	P63241	154 aa	Known RBP	10.08	□□□□□ -0.8
PTPN7-218	ENST00000496197	RAB24	Q969Q5	203 aa		10.08	□□□□□ -0.8
PTPN7-218	ENST00000496197	SPAG8	Q99932	426 aa	Predicted RBP	10.08	□□□□□ -0.8
PTPN7-218	ENST00000496197	WFDC10A	Q9H1F0	79 aa		10.08	□□□□□ -0.8
PTPN7-218	ENST00000496197	PFDN2	Q9UHV9	154 aa		10.08	□□□□□ -0.8
PTPN7-218	ENST00000496197	SLC17A3	O00476	420 aa		10.07	□□□□□ -0.8
PTPN7-218	ENST00000496197	OR10J4	P0C629	311 aa		10.07	□□□□□ -0.8
PTPN7-218	ENST00000496197	RPL7	P18124	248 aa	Known RBP	10.07	□□□□□ -0.8
PTPN7-218	ENST00000496197	AKR1C8P	Q5T2L2	129 aa		10.07	□□□□□ -0.8
PTPN7-218	ENST00000496197	IGFL4	Q6B9Z1	124 aa		10.07	□□□□□ -0.8
PTPN7-218	ENST00000496197	ALKAL2	Q6UX46	152 aa		10.07	□□□□□ -0.8
PTPN7-218	ENST00000496197	BPIFA4P	Q86YQ2	179 aa		10.07	□□□□□ -0.8
PTPN7-218	ENST00000496197	NRN1	Q9NPD7	142 aa		10.07	□□□□□ -0.8
PTPN7-218	ENST00000496197	C19orf73	Q9NVV2	129 aa		10.07	□□□□□ -0.8
PTPN7-218	ENST00000496197	ZNF586	Q9NXT0	402 aa		10.07	□□□□□ -0.8
PTPN7-218	ENST00000496197		A0A087X0K7	114 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197		A0A1W2PPV4	95 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	MB	P02144	154 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	STAG3L2	P0CL84	134 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	STAG3L3	P0CL85	134 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	PRB4	P10163	310 aa	Predicted RBP	10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	HLA-DMB	P28068	263 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	GALR1	P47211	349 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	ZNF124	Q15973	351 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	ODF3L2	Q3SX64	289 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	FXYD5	Q96DB9	178 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	GPR82	Q96P67	336 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	TMEM14C	Q9P0S9	112 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	UBQLN2	Q9UHD9	624 aa		10.06	□□□□□ -0.8
PTPN7-218	ENST00000496197	TRAV8-2	A0A0B4J237	113 aa		10.05	□□□□□ -0.8
PTPN7-218	ENST00000496197	OR7C2	O60412	319 aa		10.05	□□□□□ -0.8
PTPN7-218	ENST00000496197	CD5	P06127	495 aa		10.05	□□□□□ -0.8
PTPN7-218	ENST00000496197	ARL14EPL	P0DKL9	152 aa		10.05	□□□□□ -0.8
PTPN7-218	ENST00000496197	ATF4	P18848	351 aa	Predicted RBP	10.05	□□□□□ -0.8
PTPN7-218	ENST00000496197	C4BPB	P20851	252 aa		10.05	□□□□□ -0.8
PTPN7-218	ENST00000496197	S100A7	P31151	101 aa		10.05	□□□□□ -0.8
PTPN7-218	ENST00000496197	FGF8	P55075	233 aa	Predicted RBP	10.05	□□□□□ -0.8
PTPN7-218	ENST00000496197	S100A7A	Q86SG5	101 aa		10.05	□□□□□ -0.8
PTPN7-218	ENST00000496197		Q8N1Y9	231 aa		10.05	□□□□□ -0.8
PTPN7-218	ENST00000496197	FAM213B	Q8TBF2	198 aa		10.05	□□□□□ -0.8
PTPN7-218	ENST00000496197	SAT2	Q96F10	170 aa	Predicted RBP	10.05	□□□□□ -0.8
PTPN7-218	ENST00000496197	C20orf173	Q96LM9	149 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 93 ms