RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 LGALS9CQ6DKI2 356 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 EBLN2Q6P2I7 272 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 ZNF431Q8TF32 576 aaPredicted RBP12.98□□□□□ -0.33
PTPRU-207ENST00000492954 GPR82Q96P67 336 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 SHANK2-AS3Q9BTD1 123 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 SLC35B3Q9H1N7 401 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 NPVFQ9HCQ7 196 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 RPRMQ9NS64 109 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 MGAT4CQ9UBM8 478 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 IGHV3OR16-12A0A075B7B8 117 aa12.97□□□□□ -0.33
PTPRU-207ENST00000492954 FAM25EA8MYX2 175 aa12.97□□□□□ -0.33
PTPRU-207ENST00000492954 DEDDO75618 318 aa12.97□□□□□ -0.33
PTPRU-207ENST00000492954 OR5G3P0C626 314 aa12.97□□□□□ -0.33
PTPRU-207ENST00000492954 PLP1P60201 277 aa12.97□□□□□ -0.33
PTPRU-207ENST00000492954 SELENOTP62341 195 aa12.97□□□□□ -0.33
PTPRU-207ENST00000492954 PSG9Q00887 426 aa12.97□□□□□ -0.33
PTPRU-207ENST00000492954 SLC38A11Q08AI6 406 aa12.97□□□□□ -0.33
PTPRU-207ENST00000492954 ZNF846Q147U1 533 aa12.97□□□□□ -0.33
PTPRU-207ENST00000492954 IGFL4Q6B9Z1 124 aa12.97□□□□□ -0.33
PTPRU-207ENST00000492954 ZNF705AQ6ZN79 300 aaPredicted RBP12.97□□□□□ -0.33
PTPRU-207ENST00000492954 ZNF767PQ75MW2 155 aa12.97□□□□□ -0.33
PTPRU-207ENST00000492954 RPP25LQ8N5L8 163 aaKnown RBP12.97□□□□□ -0.33
PTPRU-207ENST00000492954 UHRF2Q96PU4 802 aa12.97□□□□□ -0.33
PTPRU-207ENST00000492954 TRAV8-2A0A0B4J237 113 aa12.96□□□□□ -0.33
PTPRU-207ENST00000492954 ZNF705FA8MVS1 300 aaPredicted RBP12.96□□□□□ -0.33
PTPRU-207ENST00000492954 ZNF705DP0CH99 300 aaPredicted RBP12.96□□□□□ -0.33
PTPRU-207ENST00000492954 ZNF705BP0CI00 300 aaPredicted RBP12.96□□□□□ -0.33
PTPRU-207ENST00000492954 FGL1Q08830 312 aa12.96□□□□□ -0.33
PTPRU-207ENST00000492954 TEPPQ6URK8 271 aa12.96□□□□□ -0.33
PTPRU-207ENST00000492954 LSM5Q9Y4Y9 91 aaKnown RBP12.96□□□□□ -0.33
PTPRU-207ENST00000492954 TRAV10A0A0B4J240 114 aa12.95□□□□□ -0.34
PTPRU-207ENST00000492954 C5orf51A6NDU8 294 aa12.95□□□□□ -0.34
PTPRU-207ENST00000492954 K7EPK0 472 aa12.95□□□□□ -0.34
PTPRU-207ENST00000492954 L7N2F9 121 aa12.95□□□□□ -0.34
PTPRU-207ENST00000492954 H2AFB2P0C5Z0 115 aa12.95□□□□□ -0.34
PTPRU-207ENST00000492954 VAMP2P63027 116 aa12.95□□□□□ -0.34
PTPRU-207ENST00000492954 C12orf74Q32Q52 190 aa12.95□□□□□ -0.34
PTPRU-207ENST00000492954 PATE2Q6UY27 113 aa12.95□□□□□ -0.34
PTPRU-207ENST00000492954 C12orf45Q8N5I9 185 aaPredicted RBP12.95□□□□□ -0.34
PTPRU-207ENST00000492954 RNF182Q8N6D2 247 aa12.95□□□□□ -0.34
PTPRU-207ENST00000492954 NEU1Q99519 415 aa12.95□□□□□ -0.34
PTPRU-207ENST00000492954 ARL6Q9H0F7 186 aa12.95□□□□□ -0.34
PTPRU-207ENST00000492954 BIRC6Q9NR09 4857 aa12.94□□□□□ -0.34
PTPRU-207ENST00000492954 FAM240BA0A1B0GVZ2 78 aa12.94□□□□□ -0.34
PTPRU-207ENST00000492954 RPL7P18124 248 aaKnown RBP12.94□□□□□ -0.34
PTPRU-207ENST00000492954 EMP1P54849 157 aa12.94□□□□□ -0.34
PTPRU-207ENST00000492954 TCTAP57738 103 aa12.94□□□□□ -0.34
PTPRU-207ENST00000492954 GGACTQ9BVM4 153 aa12.94□□□□□ -0.34
PTPRU-207ENST00000492954 APLNQ9ULZ1 77 aa12.94□□□□□ -0.34
PTPRU-207ENST00000492954 A8MTW9 85 aa12.93□□□□□ -0.34
PTPRU-207ENST00000492954 AGPAT2O15120 278 aa12.93□□□□□ -0.34
PTPRU-207ENST00000492954 BCAP31P51572 246 aa12.93□□□□□ -0.34
PTPRU-207ENST00000492954 AMTNQ6UX39 209 aa12.93□□□□□ -0.34
PTPRU-207ENST00000492954 LINC00299Q6ZSB3 139 aa12.93□□□□□ -0.34
PTPRU-207ENST00000492954 ZNF546Q86UE3 836 aa12.93□□□□□ -0.34
PTPRU-207ENST00000492954 C1orf158Q8N1D5 194 aa12.93□□□□□ -0.34
PTPRU-207ENST00000492954 C2orf50Q96LR7 162 aa12.93□□□□□ -0.34
PTPRU-207ENST00000492954 ARV1Q9H2C2 271 aa12.93□□□□□ -0.34
PTPRU-207ENST00000492954 C11orf1Q9H5F2 150 aa12.93□□□□□ -0.34
PTPRU-207ENST00000492954 VPS13DQ5THJ4 4388 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 SMIM9A6NGZ8 99 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 GOSR2O14653 212 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 CST7O76096 145 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 CAV2P51636 162 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 CNN1P51911 297 aaKnown RBP12.92□□□□□ -0.34
PTPRU-207ENST00000492954 PRR20EP86478 221 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 PRR20CP86479 221 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 PRR20DP86480 221 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 PRR20BP86481 221 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 PRR20AP86496 221 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 MZT2BQ6NZ67 158 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 ZNF738Q8NE65 137 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 S100ZQ8WXG8 99 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 MGST2Q99735 147 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 GOLT1BQ9Y3E0 138 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 RFNGQ9Y644 331 aa12.92□□□□□ -0.34
PTPRU-207ENST00000492954 IGHV4-4A0A075B6R2 117 aa12.91□□□□□ -0.34
PTPRU-207ENST00000492954 A0A087X0K7 114 aa12.91□□□□□ -0.34
PTPRU-207ENST00000492954 DEFB131BA0A096LNP1 70 aa12.91□□□□□ -0.34
PTPRU-207ENST00000492954 TMEM189A5PLL7 270 aa12.91□□□□□ -0.34
PTPRU-207ENST00000492954 FAM24AA6NFZ4 105 aa12.91□□□□□ -0.34
PTPRU-207ENST00000492954 S100A10P60903 97 aa12.91□□□□□ -0.34
PTPRU-207ENST00000492954 S100A7AQ86SG5 101 aa12.91□□□□□ -0.34
PTPRU-207ENST00000492954 MRPS12O15235 138 aaKnown RBP12.9□□□□□ -0.34
PTPRU-207ENST00000492954 DUSP14O95147 198 aaKnown RBP12.9□□□□□ -0.34
PTPRU-207ENST00000492954 ASAH1Q13510 395 aa12.9□□□□□ -0.34
PTPRU-207ENST00000492954 PXDC1Q5TGL8 231 aa12.9□□□□□ -0.34
PTPRU-207ENST00000492954 OR11H7Q8NGC8 314 aa12.9□□□□□ -0.34
PTPRU-207ENST00000492954 RNF126Q9BV68 326 aa12.9□□□□□ -0.34
PTPRU-207ENST00000492954 M0R2Z0 102 aa12.89□□□□□ -0.35
PTPRU-207ENST00000492954 COX7A2P2O60397 106 aa12.89□□□□□ -0.35
PTPRU-207ENST00000492954 HBE1P02100 147 aa12.89□□□□□ -0.35
PTPRU-207ENST00000492954 SPART-AS1P0CW21 52 aa12.89□□□□□ -0.35
PTPRU-207ENST00000492954 PRB4P10163 310 aaPredicted RBP12.89□□□□□ -0.35
PTPRU-207ENST00000492954 CXCL3P19876 107 aa12.89□□□□□ -0.35
PTPRU-207ENST00000492954 IL15RAQ13261 267 aa12.89□□□□□ -0.35
PTPRU-207ENST00000492954 SPINK13Q1W4C9 94 aa12.89□□□□□ -0.35
PTPRU-207ENST00000492954 LINC00305Q7Z4B0 112 aa12.89□□□□□ -0.35
PTPRU-207ENST00000492954 LRRC20Q8TCA0 184 aa12.89□□□□□ -0.35
PTPRU-207ENST00000492954 TMEM37Q8WXS4 190 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms