RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 UQCC3Q6UW78 93 aa6.19□□□□□ -1.42
FDPS-218ENST00000492887 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.19□□□□□ -1.42
FDPS-218ENST00000492887 OR11H1Q8NG94 326 aa6.19□□□□□ -1.42
FDPS-218ENST00000492887 TMEM190Q8WZ59 177 aa6.19□□□□□ -1.42
FDPS-218ENST00000492887 DUX3Q96PT4 197 aa6.19□□□□□ -1.42
FDPS-218ENST00000492887 CITED2Q99967 270 aaPredicted RBP6.19□□□□□ -1.42
FDPS-218ENST00000492887 RARRES2Q99969 163 aa6.19□□□□□ -1.42
FDPS-218ENST00000492887 SHANK2-AS3Q9BTD1 123 aa6.19□□□□□ -1.42
FDPS-218ENST00000492887 MRPL27Q9P0M9 148 aaKnown RBP6.19□□□□□ -1.42
FDPS-218ENST00000492887 VAX2Q9UIW0 290 aa6.19□□□□□ -1.42
FDPS-218ENST00000492887 UFC1Q9Y3C8 167 aa6.19□□□□□ -1.42
FDPS-218ENST00000492887 TSSC4Q9Y5U2 329 aaPredicted RBP6.19□□□□□ -1.42
FDPS-218ENST00000492887 CUBNO60494 3623 aa6.19□□□□□ -1.42
FDPS-218ENST00000492887 A0A1B0GUS0 222 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 C11orf94C9JXX5 98 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 F8W036 122 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 RPL7P18124 248 aaKnown RBP6.18□□□□□ -1.42
FDPS-218ENST00000492887 HOXD3P31249 432 aaPredicted RBP6.18□□□□□ -1.42
FDPS-218ENST00000492887 GALR1P47211 349 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 CDX1P47902 265 aaPredicted RBP6.18□□□□□ -1.42
FDPS-218ENST00000492887 ATP5G3P48201 142 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 SYNJ2BPP57105 145 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 RPL11P62913 178 aaKnown RBP6.18□□□□□ -1.42
FDPS-218ENST00000492887 FOXL1Q12952 345 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 ZNF674Q2M3X9 581 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 ZNF506Q5JVG8 444 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 UNQ9165/PRO28630Q6UXU0 137 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 RNF152Q8N8N0 203 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 OR1N2Q8NGR9 330 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 LYPD6BQ8NI32 183 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 MYOZ3Q8TDC0 251 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 DYNLRB2Q8TF09 96 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 ELOVL1Q9BW60 279 aa6.18□□□□□ -1.42
FDPS-218ENST00000492887 FN1P02751 2386 aaKnown RBP6.18□□□□□ -1.42
FDPS-218ENST00000492887 IGKV3-7A0A075B6H7 116 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 PF4P02776 101 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 SLC25A5P05141 298 aaKnown RBP6.17□□□□□ -1.42
FDPS-218ENST00000492887 SFTA3P0C7M3 94 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 HIST1H1EP10412 219 aaKnown RBP6.17□□□□□ -1.42
FDPS-218ENST00000492887 S100A1P23297 94 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 PROK1P58294 105 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 SRSF3P84103 164 aaKnown RBP6.17□□□□□ -1.42
FDPS-218ENST00000492887 MEF2BQ02080 365 aaPredicted RBP6.17□□□□□ -1.42
FDPS-218ENST00000492887 ICAM4Q14773 271 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 C1QL4Q86Z23 238 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 CMTM2Q8TAZ6 248 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 FAM167A-AS1Q96KT0 104 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 GPR82Q96P67 336 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 AAMDCQ9H7C9 122 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 DAZ1Q9NQZ3 744 aaKnown RBP6.17□□□□□ -1.42
FDPS-218ENST00000492887 PEMTQ9UBM1 199 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 SELENOKQ9Y6D0 94 aa6.17□□□□□ -1.42
FDPS-218ENST00000492887 IGHV7-4-1A0A0J9YVY3 117 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 FAM74A7A6NL05 159 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 F6UZH7 168 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 APOHP02749 345 aaPredicted RBP6.16□□□□□ -1.42
FDPS-218ENST00000492887 NBEAP1P0C6P0 100 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 GP9P14770 177 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 AKR1C3P42330 323 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 RANP62826 216 aaKnown RBP6.16□□□□□ -1.42
FDPS-218ENST00000492887 TM4SF20Q53R12 229 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 TCTEX1D4Q5JR98 221 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 SIGLEC15Q6ZMC9 328 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 REC114Q7Z4M0 266 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 GPHB5Q86YW7 130 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 RPUSD4Q96CM3 377 aaKnown RBP6.16□□□□□ -1.42
FDPS-218ENST00000492887 FXYD5Q96DB9 178 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 ZNF503Q96F45 646 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 Q9H3A6 140 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 TMEM14CQ9P0S9 112 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 YTHDF2Q9Y5A9 579 aaKnown RBP6.16□□□□□ -1.42
FDPS-218ENST00000492887 MTORP42345 2549 aa6.16□□□□□ -1.42
FDPS-218ENST00000492887 SCO2A0A1W2PP80 73 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 A0A1W2PRE2 83 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 PGPA6NDG6 321 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 KRBOX1C9JBD0 128 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 CCL24O00175 119 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 PDE6DO43924 150 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 SRP19P09132 144 aaKnown RBP6.15□□□□□ -1.42
FDPS-218ENST00000492887 CRYBB3P26998 211 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 SUMO1P63165 101 aaKnown RBP6.15□□□□□ -1.42
FDPS-218ENST00000492887 PSG9Q00887 426 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 SOHLH1Q5JUK2 328 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 EIF4E3Q8N5X7 224 aaKnown RBP6.15□□□□□ -1.42
FDPS-218ENST00000492887 CYB561D1Q8N8Q1 229 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 RAX2Q96IS3 184 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 LINC00052Q96N35 136 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 TXNDC17Q9BRA2 123 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 RHPN1-AS1Q9BWJ2 59 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 SLC35B3Q9H1N7 401 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 SMDT1Q9H4I9 107 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 ZNF586Q9NXT0 402 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 ARL2-SNX15V9GYD0 113 aa6.15□□□□□ -1.42
FDPS-218ENST00000492887 OTOGQ6ZRI0 2925 aa6.14□□□□□ -1.43
FDPS-218ENST00000492887 TMEM218A2RU14 115 aa6.14□□□□□ -1.43
FDPS-218ENST00000492887 HELTA6NFD8 242 aa6.14□□□□□ -1.43
FDPS-218ENST00000492887 ZNF727A8MUV8 499 aa6.14□□□□□ -1.43
FDPS-218ENST00000492887 K7EMT4 169 aa6.14□□□□□ -1.43
FDPS-218ENST00000492887 DNASE2O00115 360 aaPredicted RBP6.14□□□□□ -1.43
FDPS-218ENST00000492887 OVOL1O14753 267 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms