RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 SMKR1H3BMG3 65 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 CRXO43186 299 aaPredicted RBP2.06□□□□□ -2.08
UBR4-215ENST00000492606 HBZP02008 142 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 HIST1H1CP16403 213 aaKnown RBP2.06□□□□□ -2.08
UBR4-215ENST00000492606 S100A3P33764 101 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 MT4P47944 62 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 NMUP48645 174 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 MRPL19P49406 292 aaKnown RBP2.06□□□□□ -2.08
UBR4-215ENST00000492606 WNT4P56705 351 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 UBE2MP61081 183 aaKnown RBP2.06□□□□□ -2.08
UBR4-215ENST00000492606 CDK6Q00534 326 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 PSG9Q00887 426 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 DHRS2Q13268 280 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 POU2AF1Q16633 256 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 PCOTHQ58A44 107 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 TEX43Q6ZNM6 134 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 IDO2Q6ZQW0 420 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 C15orf56Q8N910 161 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 TMEM75Q8N9X5 138 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 FER1L6-AS1Q8NA97 138 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 VSTM2AQ8TAG5 236 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 GPX7Q96SL4 187 aaPredicted RBP2.06□□□□□ -2.08
UBR4-215ENST00000492606 SPIN2AQ99865 258 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 SPIN2BQ9BPZ2 258 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 ACTR3CQ9C0K3 210 aaPredicted RBP2.06□□□□□ -2.08
UBR4-215ENST00000492606 OR2S2Q9NQN1 319 aa2.06□□□□□ -2.08
UBR4-215ENST00000492606 IGKV1OR2-108A0A075B7D4 117 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 TRAV8-3A0A0A6YYJ7 113 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 TRAV8-1A0A0A6YYK1 113 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 IGHV3-21A0A0B4J1V1 117 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 LOC107986453A0A1B0GWG9 222 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 ZNF98A6NK75 572 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 H0Y9J4 135 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 BOLA2-SMG1P6H3BVE0 249 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 L7N2F9 121 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 DHRS3O75911 302 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 YIF1AO95070 293 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 CTSGP08311 255 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 CCR6P51684 374 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 DGCR6Q14129 220 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 TRAM2Q15035 370 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 ZSCAN26Q16670 478 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 RBM48Q5RL73 367 aaKnown RBP2.05□□□□□ -2.08
UBR4-215ENST00000492606 ZNF493Q6ZR52 646 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 Q6ZTI0 123 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 SLC35F6Q8N357 371 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 DIRC1Q969H9 104 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 IL22RA2Q969J5 263 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 TLCD1Q96CP7 247 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 ABHD14BQ96IU4 210 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 NAA50Q9GZZ1 169 aaKnown RBP2.05□□□□□ -2.08
UBR4-215ENST00000492606 CCDC59Q9P031 241 aaKnown RBP2.05□□□□□ -2.08
UBR4-215ENST00000492606 CHTOPQ9Y3Y2 248 aaKnown RBP2.05□□□□□ -2.08
UBR4-215ENST00000492606 V9GYS6 101 aa2.05□□□□□ -2.08
UBR4-215ENST00000492606 IGKV2D-24A0A075B6R9 120 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 A0A0B4J2A0 478 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 TMEM30CPA0ZSE6 113 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 A6NN06 94 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 H3BQF6 201 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 RFXANKO14593 260 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 SERPINB7O75635 380 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 DCTN3O75935 186 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 CCNB2O95067 398 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 MT-ND4P03905 459 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 EIF4EP06730 217 aaKnown RBP2.04□□□□□ -2.08
UBR4-215ENST00000492606 TLX1NBP0CAT3 122 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 HTN1P15515 57 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 HIST1H1BP16401 226 aaKnown RBP2.04□□□□□ -2.08
UBR4-215ENST00000492606 CXCL5P42830 114 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 CRYBA4P53673 196 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 RPL19P84098 196 aaKnown RBP2.04□□□□□ -2.08
UBR4-215ENST00000492606 EMX2Q04743 252 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 ZNF846Q147U1 533 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 SPA17Q15506 151 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 C2orf83Q53S99 150 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 TBPL2Q6SJ96 375 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 AMTNQ6UX39 209 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 DAZ4Q86SG3 579 aaKnown RBP2.04□□□□□ -2.08
UBR4-215ENST00000492606 DHFR2Q86XF0 187 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 PDPNQ86YL7 162 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 ARRDC1Q8N5I2 433 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 C11orf72Q8NBR9 251 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 PROKR2Q8NFJ6 384 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 GPX8Q8TED1 209 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 ZCCHC13Q8WW36 166 aaKnown RBP2.04□□□□□ -2.08
UBR4-215ENST00000492606 FAM3DQ96BQ1 224 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 OPALINQ96PE5 141 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 ERMAPQ96PL5 475 aaPredicted RBP2.04□□□□□ -2.08
UBR4-215ENST00000492606 OR52D1Q9H346 318 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 SAV1Q9H4B6 383 aaPredicted RBP2.04□□□□□ -2.08
UBR4-215ENST00000492606 RPP21Q9H633 154 aaKnown RBP2.04□□□□□ -2.08
UBR4-215ENST00000492606 ZNF331Q9NQX6 463 aaPredicted RBP2.04□□□□□ -2.08
UBR4-215ENST00000492606 SHPKQ9UHJ6 478 aa2.04□□□□□ -2.08
UBR4-215ENST00000492606 A0A1B0GTI1 187 aa2.03□□□□□ -2.08
UBR4-215ENST00000492606 A0A1B0GVX0 72 aa2.03□□□□□ -2.08
UBR4-215ENST00000492606 M0QX08 132 aa2.03□□□□□ -2.08
UBR4-215ENST00000492606 UBCP0CG48 685 aaKnown RBP2.03□□□□□ -2.08
UBR4-215ENST00000492606 SRIP30626 198 aa2.03□□□□□ -2.08
UBR4-215ENST00000492606 KCNJ3P48549 501 aa2.03□□□□□ -2.08
UBR4-215ENST00000492606 RAB11AP62491 216 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms