RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	GGNBP1	Q5YKI7	109 aa		13.19	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	IGFL4	Q6B9Z1	124 aa		13.19	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.19	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	OR13C8	Q8NGS7	320 aa		13.19	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	RNASE8	Q8TDE3	154 aa	Known RBP	13.19	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	SLC45A2	Q9UMX9	530 aa		13.19	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334		A0A087WTM6	91 aa		13.18	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	TNFAIP8	O95379	198 aa		13.18	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	APOA1	P02647	267 aa		13.18	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	CD3D	P04234	171 aa		13.18	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	SULT1A3	P0DMM9	295 aa		13.18	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	SULT1A4	P0DMN0	295 aa		13.18	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	TBP	P20226	339 aa		13.18	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	RNF182	Q8N6D2	247 aa		13.18	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	LINC00612	Q8N6U2	182 aa		13.18	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	ZNF738	Q8NE65	137 aa		13.18	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	LHFPL5	Q8TAF8	219 aa		13.18	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	COMMD3	Q9UBI1	195 aa		13.18	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	GAGE12B	A1L429	117 aa		13.17	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	GAGE7	O76087	117 aa		13.17	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	GAGE12F	P0CL80	117 aa		13.17	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	GAGE12G	P0CL81	117 aa		13.17	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	GAGE12I	P0CL82	117 aa		13.17	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	FGL1	Q08830	312 aa		13.17	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	TMEM268	Q5VZI3	342 aa		13.17	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	CCDC28A	Q8IWP9	274 aa		13.17	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	MARCH1	Q8TCQ1	289 aa		13.17	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	DTD1	Q8TEA8	209 aa		13.17	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	TRAV8-2	A0A0B4J237	113 aa		13.16	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334		H7BYZ3	331 aa		13.16	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	RLN2	P04090	185 aa		13.16	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	TGFBR1	P36897	503 aa		13.16	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	HIST1H1A	Q02539	215 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	SCGB2B2	Q4G0G5	96 aa		13.16	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	SYT8	Q8NBV8	401 aa		13.16	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	C14orf166	Q9Y224	244 aa	Known RBP	13.16	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	TNFRSF18	Q9Y5U5	241 aa		13.16	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.15	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	DNAH10OS	P0CZ25	163 aa		13.15	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	OR8A1	Q8NGG7	326 aa		13.15	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334	NAA60	Q9H7X0	242 aa		13.15	□□□□□ -0.3
CDK5RAP2-218	ENST00000491334		A0A096LPF7	62 aa		13.14	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	CDKN1B	P46527	198 aa		13.14	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	NEDD8	Q15843	81 aa		13.14	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.14	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	RBKS	Q9H477	322 aa		13.14	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	HSPB7	Q9UBY9	170 aa		13.14	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	TMEM56-RWDD3	S4R434	201 aa		13.14	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	TRAV9-2	A0A087WT02	112 aa		13.13	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	SNURFL	B1AK76	121 aa		13.13	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	ANKRD65	E5RJM6	399 aa		13.13	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	ORM2	P19652	201 aa		13.13	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	GPR107	Q5VW38	600 aa		13.13	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	C20orf144	Q9BQM9	153 aa		13.13	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	TMEM147	Q9BVK8	224 aa		13.13	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	UBR4	Q5T4S7	5183 aa		13.13	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	NXPH4	O95158	308 aa		13.12	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	CCR6	P51684	374 aa		13.12	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	THAP8	Q8NA92	274 aa		13.12	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	OR4D10	Q8NGI6	311 aa		13.12	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	VSIG2	Q96IQ7	327 aa		13.12	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	TMEM70	Q9BUB7	260 aa		13.12	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	IGKV1OR2-108	A0A075B7D4	117 aa		13.11	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	RAB3D	O95716	219 aa		13.11	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	RAB11A	P62491	216 aa		13.11	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	HAMP	P81172	84 aa		13.11	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	TMED4	Q7Z7H5	227 aa		13.11	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	BPIFC	Q8NFQ6	507 aa		13.11	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	IL22RA2	Q969J5	263 aa		13.11	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	MTFP1	Q9UDX5	166 aa		13.11	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	LSM3	P62310	102 aa	Known RBP	13.1	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	SMCO1	Q147U7	214 aa		13.1	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	PSG3	Q16557	428 aa		13.1	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	OR52I2	Q8NH67	350 aa		13.1	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	LRRC20	Q8TCA0	184 aa		13.1	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	TMPRSS5	Q9H3S3	457 aa		13.1	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	KCNIP3	Q9Y2W7	256 aa		13.1	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	CRYM-AS1	A6NIL9	109 aa		13.09	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	PLA2G1B	P04054	148 aa	Known RBP	13.09	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	RPL7	P18124	248 aa	Known RBP	13.09	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	CXCL3	P19876	107 aa		13.09	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	TAS2R19	P59542	299 aa		13.09	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	SURF2	Q15527	256 aa	Predicted RBP	13.09	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	TMEM229B	Q8NBD8	167 aa		13.09	□□□□□ -0.31
CDK5RAP2-218	ENST00000491334	HPGDS	O60760	199 aa		13.08	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334	STEAP1B	Q6NZ63	245 aa		13.08	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334		Q9H521	79 aa		13.08	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334	TRGV2	A0A075B6R0	118 aa		13.07	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334	FAM25A	B3EWG3	89 aa		13.07	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334	FAM25C	B3EWG5	89 aa		13.07	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334	FAM25G	B3EWG6	89 aa		13.07	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334	AKR1C4	P17516	323 aa		13.07	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334	GATA2	P23769	480 aa	Predicted RBP	13.07	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334	DAZ2	Q13117	558 aa	Known RBP	13.07	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334	OR1S1	Q8NH92	325 aa		13.07	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334	RPUSD4	Q96CM3	377 aa	Known RBP	13.07	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334	PAIP2B	Q9ULR5	123 aa	Known RBP	13.07	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334	IGLV5-52	A0A0A0MRZ9	124 aa		13.06	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334		K7EP13	123 aa		13.06	□□□□□ -0.32
CDK5RAP2-218	ENST00000491334		Q6ZTI0	123 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 128 ms