RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SHANK2-AS3Q9BTD1 123 aa12.66□□□□□ -0.38
SEC13-218ENST00000490283 SCRT1Q9BWW7 348 aa12.66□□□□□ -0.38
SEC13-218ENST00000490283 X6R8D5 127 aa12.66□□□□□ -0.38
SEC13-218ENST00000490283 AGRNO00468 2067 aa12.65□□□□□ -0.38
SEC13-218ENST00000490283 C11orf94C9JXX5 98 aa12.65□□□□□ -0.38
SEC13-218ENST00000490283 RBMY1A1P0DJD3 496 aaKnown RBP12.65□□□□□ -0.38
SEC13-218ENST00000490283 RBMY1CP0DJD4 496 aa12.65□□□□□ -0.38
SEC13-218ENST00000490283 PLP1P60201 277 aa12.65□□□□□ -0.38
SEC13-218ENST00000490283 FGL1Q08830 312 aa12.65□□□□□ -0.38
SEC13-218ENST00000490283 SLC38A11Q08AI6 406 aa12.65□□□□□ -0.38
SEC13-218ENST00000490283 ASAH1Q13510 395 aa12.65□□□□□ -0.38
SEC13-218ENST00000490283 RBMY1FQ15415 496 aaKnown RBP12.65□□□□□ -0.38
SEC13-218ENST00000490283 PXDC1Q5TGL8 231 aa12.65□□□□□ -0.38
SEC13-218ENST00000490283 GDF5OSQ5U4N7 250 aa12.65□□□□□ -0.38
SEC13-218ENST00000490283 C2CD4CQ8TF44 421 aa12.65□□□□□ -0.38
SEC13-218ENST00000490283 CLUHP3Q96NS8 147 aa12.65□□□□□ -0.38
SEC13-218ENST00000490283 ARL6Q9H0F7 186 aa12.65□□□□□ -0.38
SEC13-218ENST00000490283 K7EPK0 472 aa12.64□□□□□ -0.39
SEC13-218ENST00000490283 DEDDO75618 318 aa12.64□□□□□ -0.39
SEC13-218ENST00000490283 DEFB1P60022 68 aa12.64□□□□□ -0.39
SEC13-218ENST00000490283 S100A10P60903 97 aa12.64□□□□□ -0.39
SEC13-218ENST00000490283 PSG9Q00887 426 aa12.64□□□□□ -0.39
SEC13-218ENST00000490283 RAB31Q13636 194 aa12.64□□□□□ -0.39
SEC13-218ENST00000490283 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.64□□□□□ -0.39
SEC13-218ENST00000490283 LRRC20Q8TCA0 184 aa12.64□□□□□ -0.39
SEC13-218ENST00000490283 GPN1Q9HCN4 374 aaPredicted RBP12.64□□□□□ -0.39
SEC13-218ENST00000490283 SACSQ9NZJ4 4579 aa12.63□□□□□ -0.39
SEC13-218ENST00000490283 A0A0J9YX75 114 aa12.63□□□□□ -0.39
SEC13-218ENST00000490283 FXYD7P58549 80 aa12.63□□□□□ -0.39
SEC13-218ENST00000490283 FAM78BQ5VT40 261 aa12.63□□□□□ -0.39
SEC13-218ENST00000490283 ARV1Q9H2C2 271 aa12.63□□□□□ -0.39
SEC13-218ENST00000490283 PTTG2Q9NZH5 202 aa12.63□□□□□ -0.39
SEC13-218ENST00000490283 GOLT1BQ9Y3E0 138 aa12.63□□□□□ -0.39
SEC13-218ENST00000490283 IGHV3OR16-12A0A075B7B8 117 aa12.62□□□□□ -0.39
SEC13-218ENST00000490283 F6UB75 175 aa12.62□□□□□ -0.39
SEC13-218ENST00000490283 AGPAT2O15120 278 aa12.62□□□□□ -0.39
SEC13-218ENST00000490283 UPK1BO75841 260 aa12.62□□□□□ -0.39
SEC13-218ENST00000490283 HLA-DMBP28068 263 aa12.62□□□□□ -0.39
SEC13-218ENST00000490283 TCTAP57738 103 aa12.62□□□□□ -0.39
SEC13-218ENST00000490283 UHRF2Q96PU4 802 aa12.62□□□□□ -0.39
SEC13-218ENST00000490283 ALMS1Q8TCU4 4167 aa12.62□□□□□ -0.39
SEC13-218ENST00000490283 TMEM189A5PLL7 270 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 SMIM9A6NGZ8 99 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 A6NHS1 94 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 COX7A2P2O60397 106 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 DUSP14O95147 198 aaKnown RBP12.61□□□□□ -0.39
SEC13-218ENST00000490283 HBG1P69891 147 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 HBG2P69892 147 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 ARL16Q0P5N6 197 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 ZNF705AQ6ZN79 300 aaPredicted RBP12.61□□□□□ -0.39
SEC13-218ENST00000490283 STX12Q86Y82 276 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 ZNF738Q8NE65 137 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 C20orf173Q96LM9 149 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 NEU1Q99519 415 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 SLC35B3Q9H1N7 401 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 UQCC1Q9NVA1 299 aa12.61□□□□□ -0.39
SEC13-218ENST00000490283 ELOA3CA0A087WX78 387 aaPredicted RBP12.6□□□□□ -0.39
SEC13-218ENST00000490283 TRAV10A0A0B4J240 114 aa12.6□□□□□ -0.39
SEC13-218ENST00000490283 CST7O76096 145 aa12.6□□□□□ -0.39
SEC13-218ENST00000490283 CAMLGP49069 296 aa12.6□□□□□ -0.39
SEC13-218ENST00000490283 Q6ZRG5 221 aa12.6□□□□□ -0.39
SEC13-218ENST00000490283 ZNF709Q8N972 641 aa12.6□□□□□ -0.39
SEC13-218ENST00000490283 DNAH1Q9P2D7 4330 aa12.59□□□□□ -0.39
SEC13-218ENST00000490283 FAM24AA6NFZ4 105 aa12.59□□□□□ -0.39
SEC13-218ENST00000490283 ZNF705FA8MVS1 300 aaPredicted RBP12.59□□□□□ -0.39
SEC13-218ENST00000490283 IGLL5B9A064 214 aa12.59□□□□□ -0.39
SEC13-218ENST00000490283 AMBPP02760 352 aa12.59□□□□□ -0.39
SEC13-218ENST00000490283 ZNF705DP0CH99 300 aaPredicted RBP12.59□□□□□ -0.39
SEC13-218ENST00000490283 ZNF705BP0CI00 300 aaPredicted RBP12.59□□□□□ -0.39
SEC13-218ENST00000490283 S100A11P31949 105 aa12.59□□□□□ -0.39
SEC13-218ENST00000490283 SULT1A1P50225 295 aa12.59□□□□□ -0.39
SEC13-218ENST00000490283 RAB32Q13637 225 aa12.59□□□□□ -0.39
SEC13-218ENST00000490283 Q6ZTC4 211 aa12.59□□□□□ -0.39
SEC13-218ENST00000490283 LINC00305Q7Z4B0 112 aa12.59□□□□□ -0.39
SEC13-218ENST00000490283 MGST2Q99735 147 aa12.59□□□□□ -0.39
SEC13-218ENST00000490283 TMEM208Q9BTX3 173 aa12.59□□□□□ -0.39
SEC13-218ENST00000490283 LYRM2Q9NU23 88 aaPredicted RBP12.59□□□□□ -0.39
SEC13-218ENST00000490283 RFNGQ9Y644 331 aa12.59□□□□□ -0.39
SEC13-218ENST00000490283 A0A087X0K7 114 aa12.58□□□□□ -0.4
SEC13-218ENST00000490283 TEX48A0A1B0GUV7 120 aa12.58□□□□□ -0.4
SEC13-218ENST00000490283 PRAF2O60831 178 aa12.58□□□□□ -0.4
SEC13-218ENST00000490283 HBE1P02100 147 aa12.58□□□□□ -0.4
SEC13-218ENST00000490283 C10orf113Q5VZT2 155 aa12.58□□□□□ -0.4
SEC13-218ENST00000490283 LGALS9CQ6DKI2 356 aa12.58□□□□□ -0.4
SEC13-218ENST00000490283 BPIFA4PQ86YQ2 179 aa12.58□□□□□ -0.4
SEC13-218ENST00000490283 RNF182Q8N6D2 247 aa12.58□□□□□ -0.4
SEC13-218ENST00000490283 C17orf77Q96MU5 243 aa12.58□□□□□ -0.4
SEC13-218ENST00000490283 PPP1R14DQ9NXH3 145 aa12.58□□□□□ -0.4
SEC13-218ENST00000490283 TRAV8-2A0A0B4J237 113 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 RLN2P04090 185 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 SPART-AS1P0CW21 52 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 CXCL2P19875 107 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 CNN1P51911 297 aaKnown RBP12.57□□□□□ -0.4
SEC13-218ENST00000490283 EMP1P54849 157 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 DEFA1P59665 94 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 DEFA3P59666 94 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 BAXQ07812 192 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 IGFL4Q6B9Z1 124 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 LCN15Q6UWW0 184 aa12.57□□□□□ -0.4
SEC13-218ENST00000490283 PATE2Q6UY27 113 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms