RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 RAP2BP61225 183 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 VAMP2P63027 116 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 SLC38A11Q08AI6 406 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 ASAH1Q13510 395 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 SPATA31B1PQ5VZV4 182 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 MZT2BQ6NZ67 158 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 EBLN2Q6P2I7 272 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 C20orf173Q96LM9 149 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 C2orf50Q96LR7 162 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 CLUHP3Q96NS8 147 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 SHANK2-AS3Q9BTD1 123 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 GGACTQ9BVM4 153 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 HRH4Q9H3N8 390 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 HIGD1AQ9Y241 93 aa8.28□□□□□ -1.08
SPEN-205ENST00000487496 LSM5Q9Y4Y9 91 aaKnown RBP8.28□□□□□ -1.08
SPEN-205ENST00000487496 ELOA3CA0A087WX78 387 aaPredicted RBP8.27□□□□□ -1.09
SPEN-205ENST00000487496 LY6G6CO95867 125 aa8.27□□□□□ -1.09
SPEN-205ENST00000487496 OR5G3P0C626 314 aa8.27□□□□□ -1.09
SPEN-205ENST00000487496 IL15RAQ13261 267 aa8.27□□□□□ -1.09
SPEN-205ENST00000487496 FAM78BQ5VT40 261 aa8.27□□□□□ -1.09
SPEN-205ENST00000487496 ZNF709Q8N972 641 aa8.27□□□□□ -1.09
SPEN-205ENST00000487496 OR4B1Q8NGF8 309 aa8.27□□□□□ -1.09
SPEN-205ENST00000487496 UHRF2Q96PU4 802 aa8.27□□□□□ -1.09
SPEN-205ENST00000487496 ARL6Q9H0F7 186 aa8.27□□□□□ -1.09
SPEN-205ENST00000487496 C11orf1Q9H5F2 150 aa8.27□□□□□ -1.09
SPEN-205ENST00000487496 RPRMQ9NS64 109 aa8.27□□□□□ -1.09
SPEN-205ENST00000487496 TRAV8-2A0A0B4J237 113 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 A0A0J9YX75 114 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 GOSR2O14653 212 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 AGPAT2O15120 278 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 UPK1BO75841 260 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 RPL7P18124 248 aaKnown RBP8.26□□□□□ -1.09
SPEN-205ENST00000487496 HLA-DMBP28068 263 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 BCAP31P51572 246 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 CAV2P51636 162 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 FXYD7P58549 80 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 PATE2Q6UY27 113 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 ZNF705AQ6ZN79 300 aaPredicted RBP8.26□□□□□ -1.09
SPEN-205ENST00000487496 SLC35B3Q9H1N7 401 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 ARV1Q9H2C2 271 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 PTTG2Q9NZH5 202 aa8.26□□□□□ -1.09
SPEN-205ENST00000487496 FAM24AA6NFZ4 105 aa8.25□□□□□ -1.09
SPEN-205ENST00000487496 C11orf94C9JXX5 98 aa8.25□□□□□ -1.09
SPEN-205ENST00000487496 PVALBP20472 110 aaPredicted RBP8.25□□□□□ -1.09
SPEN-205ENST00000487496 PSG9Q00887 426 aa8.25□□□□□ -1.09
SPEN-205ENST00000487496 IFITM3Q01628 133 aa8.25□□□□□ -1.09
SPEN-205ENST00000487496 FGL1Q08830 312 aa8.25□□□□□ -1.09
SPEN-205ENST00000487496 IGFL4Q6B9Z1 124 aa8.25□□□□□ -1.09
SPEN-205ENST00000487496 S100A7AQ86SG5 101 aa8.25□□□□□ -1.09
SPEN-205ENST00000487496 ZNF546Q86UE3 836 aa8.25□□□□□ -1.09
SPEN-205ENST00000487496 ENKURQ8TC29 256 aa8.25□□□□□ -1.09
SPEN-205ENST00000487496 C2CD4CQ8TF44 421 aa8.25□□□□□ -1.09
SPEN-205ENST00000487496 NEU1Q99519 415 aa8.25□□□□□ -1.09
SPEN-205ENST00000487496 MGST2Q99735 147 aa8.25□□□□□ -1.09
SPEN-205ENST00000487496 A8MTW9 85 aa8.24□□□□□ -1.09
SPEN-205ENST00000487496 ZNF705FA8MVS1 300 aaPredicted RBP8.24□□□□□ -1.09
SPEN-205ENST00000487496 CST7O76096 145 aa8.24□□□□□ -1.09
SPEN-205ENST00000487496 ZNF705DP0CH99 300 aaPredicted RBP8.24□□□□□ -1.09
SPEN-205ENST00000487496 ZNF705BP0CI00 300 aaPredicted RBP8.24□□□□□ -1.09
SPEN-205ENST00000487496 S100A10P60903 97 aa8.24□□□□□ -1.09
SPEN-205ENST00000487496 RAB32Q13637 225 aa8.24□□□□□ -1.09
SPEN-205ENST00000487496 PXDC1Q5TGL8 231 aa8.24□□□□□ -1.09
SPEN-205ENST00000487496 Q6ZTC4 211 aa8.24□□□□□ -1.09
SPEN-205ENST00000487496 RNF182Q8N6D2 247 aa8.24□□□□□ -1.09
SPEN-205ENST00000487496 LYRM2Q9NU23 88 aaPredicted RBP8.24□□□□□ -1.09
SPEN-205ENST00000487496 CELA1Q9UNI1 258 aa8.24□□□□□ -1.09
SPEN-205ENST00000487496 IGHV3OR16-12A0A075B7B8 117 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 A0A087X0K7 114 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 SMIM9A6NGZ8 99 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 MRPS12O15235 138 aaKnown RBP8.23□□□□□ -1.09
SPEN-205ENST00000487496 CAMLGP49069 296 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 SULT1A1P50225 295 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 CNN1P51911 297 aaKnown RBP8.23□□□□□ -1.09
SPEN-205ENST00000487496 TCTAP57738 103 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 RAB31Q13636 194 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 LGALS9CQ6DKI2 356 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 AMTNQ6UX39 209 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 LINC00305Q7Z4B0 112 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 NRARPQ7Z6K4 114 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 C1orf158Q8N1D5 194 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 TMEM252Q8N6L7 170 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 TMEM37Q8WXS4 190 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 GPN1Q9HCN4 374 aaPredicted RBP8.23□□□□□ -1.09
SPEN-205ENST00000487496 RNF24Q9Y225 148 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 WDR83OSQ9Y284 106 aa8.23□□□□□ -1.09
SPEN-205ENST00000487496 IGSF23A1L1A6 192 aa8.22□□□□□ -1.09
SPEN-205ENST00000487496 IGLL5B9A064 214 aa8.22□□□□□ -1.09
SPEN-205ENST00000487496 COX7A2P2O60397 106 aa8.22□□□□□ -1.09
SPEN-205ENST00000487496 DUSP14O95147 198 aaKnown RBP8.22□□□□□ -1.09
SPEN-205ENST00000487496 CXCL3P19876 107 aa8.22□□□□□ -1.09
SPEN-205ENST00000487496 S100A11P31949 105 aa8.22□□□□□ -1.09
SPEN-205ENST00000487496 VWC2Q2TAL6 325 aa8.22□□□□□ -1.09
SPEN-205ENST00000487496 C12orf74Q32Q52 190 aa8.22□□□□□ -1.09
SPEN-205ENST00000487496 MIC13Q5XKP0 118 aa8.22□□□□□ -1.09
SPEN-205ENST00000487496 ZNF767PQ75MW2 155 aa8.22□□□□□ -1.09
SPEN-205ENST00000487496 ZNF738Q8NE65 137 aa8.22□□□□□ -1.09
SPEN-205ENST00000487496 LRRC20Q8TCA0 184 aa8.22□□□□□ -1.09
SPEN-205ENST00000487496 ANAPC16Q96DE5 110 aa8.22□□□□□ -1.09
SPEN-205ENST00000487496 UQCC1Q9NVA1 299 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms