RNA–Protein interactions for RNA: ENST00000487163.5

USP21-208, Transcript of ubiquitin specific peptidase 21, humanhuman

TSL 1 (best)

Gene USP21, Length 2,514 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-208ENST00000487163 NDUFAF3Q9BU61 184 aa13.27□□□□□ -0.29
USP21-208ENST00000487163 TBL2Q9Y4P3 447 aaKnown RBP13.27□□□□□ -0.29
USP21-208ENST00000487163 ZFHX3Q15911 3703 aa13.27□□□□□ -0.29
USP21-208ENST00000487163 A0A1W2PS18 150 aa13.27□□□□□ -0.29
USP21-208ENST00000487163 IL4P05112 153 aa13.27□□□□□ -0.29
USP21-208ENST00000487163 VN1R17PQ8TDU5 208 aa13.27□□□□□ -0.29
USP21-208ENST00000487163 SRSF8Q9BRL6 282 aaKnown RBP13.27□□□□□ -0.29
USP21-208ENST00000487163 FBXL7Q9UJT9 491 aa13.27□□□□□ -0.29
USP21-208ENST00000487163 CACNA1BQ00975 2339 aa13.26□□□□□ -0.29
USP21-208ENST00000487163 GOLT1AQ6ZVE7 132 aa13.26□□□□□ -0.29
USP21-208ENST00000487163 CIARTQ8N365 385 aaPredicted RBP13.26□□□□□ -0.29
USP21-208ENST00000487163 ZNF491Q8N8L2 437 aa13.26□□□□□ -0.29
USP21-208ENST00000487163 CFAP46Q8IYW2 2715 aa13.26□□□□□ -0.29
USP21-208ENST00000487163 FAM19A2Q8N3H0 131 aa13.26□□□□□ -0.29
USP21-208ENST00000487163 A0A1B0GV90 55 aa13.25□□□□□ -0.29
USP21-208ENST00000487163 KRTDAPP60985 99 aa13.25□□□□□ -0.29
USP21-208ENST00000487163 C1orf194Q5T5A4 169 aa13.25□□□□□ -0.29
USP21-208ENST00000487163 WIPF2Q8TF74 440 aaPredicted RBP13.25□□□□□ -0.29
USP21-208ENST00000487163 GTSF1Q8WW33 167 aa13.25□□□□□ -0.29
USP21-208ENST00000487163 RNF125Q96EQ8 232 aa13.25□□□□□ -0.29
USP21-208ENST00000487163 KCNS1Q96KK3 526 aa13.25□□□□□ -0.29
USP21-208ENST00000487163 FANCD2OSQ96PS1 177 aa13.25□□□□□ -0.29
USP21-208ENST00000487163 CHRDL1Q9BU40 450 aa13.25□□□□□ -0.29
USP21-208ENST00000487163 RPP21Q9H633 154 aaKnown RBP13.25□□□□□ -0.29
USP21-208ENST00000487163 OTORQ9NRC9 128 aa13.25□□□□□ -0.29
USP21-208ENST00000487163 TMEM14CQ9P0S9 112 aa13.25□□□□□ -0.29
USP21-208ENST00000487163 CELSR1Q9NYQ6 3014 aa13.25□□□□□ -0.29
USP21-208ENST00000487163 IGHV3-23P01764 117 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 PRNTQ86SH4 94 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 DTX2Q86UW9 622 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 C18orf32Q8TCD1 76 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 GNG7O60262 68 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 IGLV2-11P01706 119 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 P01737 135 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 Q86TA4 180 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 OR2D3Q8NGH3 330 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 SMIM12Q96EX1 92 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 SHANK2-AS3Q9BTD1 123 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 PRSS22Q9GZN4 317 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 NRN1Q9NPD7 142 aa13.24□□□□□ -0.29
USP21-208ENST00000487163 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
USP21-208ENST00000487163 FCGR2BP31994 310 aaPredicted RBP13.23□□□□□ -0.29
USP21-208ENST00000487163 BPIFA4PQ86YQ2 179 aa13.23□□□□□ -0.29
USP21-208ENST00000487163 ARPC1AQ92747 370 aa13.23□□□□□ -0.29
USP21-208ENST00000487163 TRBV19A0A075B6N1 114 aa13.23□□□□□ -0.29
USP21-208ENST00000487163 KIR2DL5BA0A0G2JN68 375 aa13.23□□□□□ -0.29
USP21-208ENST00000487163 KIR2DL5BA0A0G2JPC4 375 aa13.23□□□□□ -0.29
USP21-208ENST00000487163 H3BRN7 92 aa13.23□□□□□ -0.29
USP21-208ENST00000487163 HOXB4P17483 251 aaPredicted RBP13.23□□□□□ -0.29
USP21-208ENST00000487163 PCP4P48539 62 aa13.23□□□□□ -0.29
USP21-208ENST00000487163 RASL11AQ6T310 242 aa13.23□□□□□ -0.29
USP21-208ENST00000487163 KIR2DL5AQ8N109 375 aa13.23□□□□□ -0.29
USP21-208ENST00000487163 UBTD1Q9HAC8 227 aa13.23□□□□□ -0.29
USP21-208ENST00000487163 IGLV11-55A0A075B6I3 123 aa13.22□□□□□ -0.29
USP21-208ENST00000487163 NTF3P20783 257 aa13.22□□□□□ -0.29
USP21-208ENST00000487163 ZNF562Q6V9R5 426 aa13.22□□□□□ -0.29
USP21-208ENST00000487163 PGLYRP4Q96LB8 373 aa13.22□□□□□ -0.29
USP21-208ENST00000487163 PAM16Q9Y3D7 125 aa13.22□□□□□ -0.29
USP21-208ENST00000487163 ZNF324O75467 553 aaPredicted RBP13.22□□□□□ -0.29
USP21-208ENST00000487163 IGLC2P0DOY2 106 aa13.22□□□□□ -0.29
USP21-208ENST00000487163 DAZAP1Q96EP5 407 aaKnown RBP13.22□□□□□ -0.29
USP21-208ENST00000487163 A0A1B0GXF2 115 aa13.21□□□□□ -0.29
USP21-208ENST00000487163 A8MWL6 223 aa13.21□□□□□ -0.29
USP21-208ENST00000487163 F8W735 103 aaPredicted RBP13.21□□□□□ -0.29
USP21-208ENST00000487163 COL8A1P27658 744 aa13.21□□□□□ -0.29
USP21-208ENST00000487163 TEX43Q6ZNM6 134 aa13.21□□□□□ -0.29
USP21-208ENST00000487163 OR4F17Q8NGA8 305 aa13.21□□□□□ -0.29
USP21-208ENST00000487163 M0R3E3 92 aa13.21□□□□□ -0.29
USP21-208ENST00000487163 HLA-DRB1P01911 266 aa13.21□□□□□ -0.29
USP21-208ENST00000487163 SIGLEC15Q6ZMC9 328 aa13.21□□□□□ -0.29
USP21-208ENST00000487163 EREGO14944 169 aa13.2□□□□□ -0.3
USP21-208ENST00000487163 OR2J3O76001 311 aa13.2□□□□□ -0.3
USP21-208ENST00000487163 Q56UQ5 140 aa13.2□□□□□ -0.3
USP21-208ENST00000487163 CCDC144NLQ6NUI1 221 aa13.2□□□□□ -0.3
USP21-208ENST00000487163 ZNF492Q9P255 531 aa13.2□□□□□ -0.3
USP21-208ENST00000487163 TMEM11P17152 192 aa13.2□□□□□ -0.3
USP21-208ENST00000487163 UQCRFS1P47985 274 aa13.2□□□□□ -0.3
USP21-208ENST00000487163 NIT1Q86X76 327 aa13.2□□□□□ -0.3
USP21-208ENST00000487163 Q8N6K4 173 aa13.2□□□□□ -0.3
USP21-208ENST00000487163 Q8N976 141 aa13.2□□□□□ -0.3
USP21-208ENST00000487163 ALKBH7Q9BT30 221 aaPredicted RBP13.2□□□□□ -0.3
USP21-208ENST00000487163 WI2-2373I1.2A0A1W2PRP0 233 aa13.19□□□□□ -0.3
USP21-208ENST00000487163 ZNF785A8K8V0 405 aa13.19□□□□□ -0.3
USP21-208ENST00000487163 NPIPB5A8MRT5 1133 aa13.19□□□□□ -0.3
USP21-208ENST00000487163 MRPS12O15235 138 aaKnown RBP13.19□□□□□ -0.3
USP21-208ENST00000487163 NDUFB8O95169 186 aa13.19□□□□□ -0.3
USP21-208ENST00000487163 MFAP4P55083 255 aa13.19□□□□□ -0.3
USP21-208ENST00000487163 HBBP68871 147 aa13.19□□□□□ -0.3
USP21-208ENST00000487163 C1orf122Q6ZSJ8 110 aa13.19□□□□□ -0.3
USP21-208ENST00000487163 SIRPDQ9H106 197 aa13.19□□□□□ -0.3
USP21-208ENST00000487163 FLNCQ14315 2725 aa13.19□□□□□ -0.3
USP21-208ENST00000487163 UTP20O75691 2785 aaKnown RBP13.19□□□□□ -0.3
USP21-208ENST00000487163 DIRC3C9JPN6 131 aa13.19□□□□□ -0.3
USP21-208ENST00000487163 FAM120AOSQ5T036 256 aa13.19□□□□□ -0.3
USP21-208ENST00000487163 ATP5L2Q7Z4Y8 100 aa13.19□□□□□ -0.3
USP21-208ENST00000487163 OR2T8A6NH00 312 aa13.18□□□□□ -0.3
USP21-208ENST00000487163 FOXA3P55318 350 aaPredicted RBP13.18□□□□□ -0.3
USP21-208ENST00000487163 TTC9CQ8N5M4 171 aa13.18□□□□□ -0.3
USP21-208ENST00000487163 ZC2HC1AQ96GY0 325 aa13.18□□□□□ -0.3
USP21-208ENST00000487163 ZNF414Q96IQ9 312 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms