RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 UBE2V1Q13404 147 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 USF2Q15853 346 aaPredicted RBP3.19□□□□□ -1.9
CKS1B-207ENST00000477676 BSXQ3C1V8 233 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 RNF212Q495C1 297 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 TMEM41BQ5BJD5 291 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 FAM222AQ5U5X8 452 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 PRR27Q6MZM9 219 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 C1orf158Q8N1D5 194 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 ZNRF2Q8NHG8 242 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 MRGPRFQ96AM1 343 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 C17orf77Q96MU5 243 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 SLC35B3Q9H1N7 401 aa3.19□□□□□ -1.9
CKS1B-207ENST00000477676 IGLV5-52A0A0A0MRZ9 124 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 NBDYA0A0U1RRE5 68 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 HELTA6NFD8 242 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 C5orf52A6NGY3 159 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 INS-IGF2F8WCM5 200 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 CLN5O75503 358 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 SCGNO76038 276 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 EIF4EP06730 217 aaKnown RBP3.18□□□□□ -1.9
CKS1B-207ENST00000477676 IGLC1P0CG04 106 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 HLA-DRB4P13762 266 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 HTN3P15516 51 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 HRH1P35367 487 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 FUSP35637 526 aaKnown RBP eCLIP3.18□□□□□ -1.9
CKS1B-207ENST00000477676 ETV6P41212 452 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 HTR2BP41595 481 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 NPBWR1P48145 328 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 DLK1P80370 383 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 S100A12P80511 92 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 SMUG1Q53HV7 270 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 IDNKQ5T6J7 187 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 PRSS54Q6PEW0 395 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 H2BFWTQ7Z2G1 175 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 SPATA12Q7Z6I5 190 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 TPRA1Q86W33 373 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 UBE2DNLQ8IWF7 75 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 OR4X1Q8NH49 305 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 OR4A16Q8NH70 328 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 METTL26Q96S19 204 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 NIPSNAP3BQ9BS92 247 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 YTHDF1Q9BYJ9 559 aaKnown RBP3.18□□□□□ -1.9
CKS1B-207ENST00000477676 FAM212BQ9NTI7 297 aaPredicted RBP3.18□□□□□ -1.9
CKS1B-207ENST00000477676 FKBP11Q9NYL4 201 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 HLA-DRB4X5D2U9 266 aa3.18□□□□□ -1.9
CKS1B-207ENST00000477676 IGHV3OR16-12A0A075B7B8 117 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 A0A0A6YYH2 397 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 A0A1W2PPQ1 181 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 A0A1W2PS18 150 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 PLAC8L1A1L4L8 177 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 A6NJ64 397 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 A8MTW9 85 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 F6UB75 175 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 WRBO00258 174 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 SOCS3O14543 225 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 IFNA21P01568 189 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 IFNA17P01571 189 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 SPART-AS1P0CW21 52 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 NPY1RP25929 384 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 PSMB9P28065 219 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 HLA-DMAP28067 261 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 CBX5P45973 191 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 RPL5P46777 297 aaKnown RBP3.17□□□□□ -1.9
CKS1B-207ENST00000477676 XGP55808 180 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 TAS2R20P59543 309 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 RAB14P61106 215 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 ERHP84090 104 aaKnown RBP3.17□□□□□ -1.9
CKS1B-207ENST00000477676 DHODHQ02127 395 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 OXA1LQ15070 435 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 C6orf223Q8N319 242 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 OR5H2Q8NGV7 314 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 GPX8Q8TED1 209 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 FAM210BQ96KR6 192 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 CNBD2Q96M20 576 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 TP53RKQ96S44 253 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 TSC22D3Q99576 134 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 TMEM231Q9H6L2 316 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 PAIP2BQ9ULR5 123 aaKnown RBP3.17□□□□□ -1.9
CKS1B-207ENST00000477676 LINC00588Q9Y4M8 146 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 YTHDF2Q9Y5A9 579 aaKnown RBP3.17□□□□□ -1.9
CKS1B-207ENST00000477676 RFNGQ9Y644 331 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 TNXBP22105 4242 aa3.17□□□□□ -1.9
CKS1B-207ENST00000477676 SERTM2A0A1B0GWG4 89 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 SMIM9A6NGZ8 99 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 CRXO43186 299 aaPredicted RBP3.16□□□□□ -1.9
CKS1B-207ENST00000477676 OPRK1P41145 380 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 NKX2-1P43699 371 aaPredicted RBP3.16□□□□□ -1.9
CKS1B-207ENST00000477676 RND2P52198 227 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 SPCS2Q15005 226 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 FCN2Q15485 313 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 ZNF79Q15937 498 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 SP6Q3SY56 376 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 SOHLH1Q5JUK2 328 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 SAPCD1Q5SSQ6 148 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 AMTNQ6UX39 209 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 IZUMO2Q6UXV1 221 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 LHFPL1Q86WI0 220 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 CMTM1Q8IZ96 169 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 OR6F1Q8NGZ6 308 aa3.16□□□□□ -1.9
CKS1B-207ENST00000477676 LHFPL5Q8TAF8 219 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms