RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 MIR17HGQ75NE6 70 aa2.48□□□□□ -2.01
VPS13D-207ENST00000476169 HMGN2P46Q86SG4 172 aa2.48□□□□□ -2.01
VPS13D-207ENST00000476169 HIST3H2BBQ8N257 126 aa2.48□□□□□ -2.01
VPS13D-207ENST00000476169 RNF182Q8N6D2 247 aa2.48□□□□□ -2.01
VPS13D-207ENST00000476169 C1orf64Q8NEQ6 169 aa2.48□□□□□ -2.01
VPS13D-207ENST00000476169 STAG3L4Q8TBR4 150 aa2.48□□□□□ -2.01
VPS13D-207ENST00000476169 ISOC1Q96CN7 298 aa2.48□□□□□ -2.01
VPS13D-207ENST00000476169 ADAT3Q96EY9 351 aaPredicted RBP2.48□□□□□ -2.01
VPS13D-207ENST00000476169 BORCS8Q96FH0 119 aa2.48□□□□□ -2.01
VPS13D-207ENST00000476169 CACYBPQ9HB71 228 aaKnown RBP2.48□□□□□ -2.01
VPS13D-207ENST00000476169 MRPL16Q9NX20 251 aaKnown RBP2.48□□□□□ -2.01
VPS13D-207ENST00000476169 SPANXCQ9NY87 97 aa2.48□□□□□ -2.01
VPS13D-207ENST00000476169 JPT1Q9UK76 154 aa2.48□□□□□ -2.01
VPS13D-207ENST00000476169 NUBP2Q9Y5Y2 271 aa2.48□□□□□ -2.01
VPS13D-207ENST00000476169 MAST2Q6P0Q8 1798 aa2.48□□□□□ -2.01
VPS13D-207ENST00000476169 MYH2Q9UKX2 1941 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 MYO10Q9HD67 2058 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 IGLV2-18A0A075B6J9 118 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 J3KT08 172 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 PSCAO43653 123 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 OR2T1O43869 369 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 CD24P25063 80 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 CD52P31358 61 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 RTL8BQ17RB0 113 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 PYDC2Q56P42 97 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 DPPA3Q6W0C5 159 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 ANGPTL5Q86XS5 388 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 DEFB123Q8N688 67 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 OR4D11Q8NGI4 311 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 OR51T1Q8NGJ9 327 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 TERB2Q8NHR7 220 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 WFDC5Q8TCV5 224 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 SLAMF6Q96DU3 332 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 LINC00167Q96N53 147 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 GPX7Q96SL4 187 aaPredicted RBP2.47□□□□□ -2.01
VPS13D-207ENST00000476169 PFDN5Q99471 154 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 RTL8AQ9BWD3 113 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 AICDAQ9GZX7 198 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 CXCL16Q9H2A7 254 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 RASL12Q9NYN1 266 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 R4GN34 69 aa2.47□□□□□ -2.01
VPS13D-207ENST00000476169 AKAP11Q9UKA4 1901 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 TRGC2P03986 189 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 MSMBP08118 114 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 ZNF728P0DKX0 622 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 BCL2P10415 239 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 PSMB8P28062 276 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 CMPK1P30085 196 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 S100A11P31949 105 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 AKR1C3P42330 323 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 SRP9P49458 86 aaKnown RBP2.46□□□□□ -2.02
VPS13D-207ENST00000476169 POLR2HP52434 150 aaKnown RBP2.46□□□□□ -2.02
VPS13D-207ENST00000476169 HRCT1Q6UXD1 115 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 Q6ZS52 159 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 SLC35E3Q7Z769 313 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 LHFPL1Q86WI0 220 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 ZNF561Q8N587 486 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 DCANP1Q8TF63 244 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 TMEM106AQ96A25 262 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 HIST1H2BLQ99880 126 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 RNF122Q9H9V4 155 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 PSME4Q14997 1843 aa2.46□□□□□ -2.02
VPS13D-207ENST00000476169 A0A0G2JMZ2 1700 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 TRGV5A0A0B4J1U4 118 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 TLCD2A6NGC4 264 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 TMEM256-PLSCR3K7ERE1 68 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 GNRH2O43555 120 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 GGCTO75223 188 aaKnown RBP2.45□□□□□ -2.02
VPS13D-207ENST00000476169 CPSF4O95639 269 aaKnown RBP2.45□□□□□ -2.02
VPS13D-207ENST00000476169 DEFA4P12838 97 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 COX4I1P13073 169 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 LGALS3P17931 250 aaKnown RBP2.45□□□□□ -2.02
VPS13D-207ENST00000476169 COL8A2P25067 703 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 EVX1P49640 407 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 INSL3P51460 131 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 UBE2BP63146 152 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 OR8B8Q15620 311 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 DEFB134Q4QY38 66 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 KHDC3LQ587J8 217 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 BRMS1LQ5PSV4 323 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 AGTRAPQ6RW13 159 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 C10orf126Q8N4M7 172 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 CANT1Q8WVQ1 401 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 YPEL2Q96QA6 119 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 LXNQ9BS40 222 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 YIPF3Q9GZM5 350 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 TMEM126AQ9H061 195 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 HSPE1-MOB4S4R3N1 261 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 LOC285556D6RIA3 1793 aa2.45□□□□□ -2.02
VPS13D-207ENST00000476169 HTTP42858 3142 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 DOCK1Q14185 1865 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 BORCS7-ASMTA0A0B4J1R7 106 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 A0A0J9YX75 114 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 ODAMA1E959 279 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 TMEM189A5PLL7 270 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 M0R378 163 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 LYZL6O75951 148 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 DBIP07108 87 aaKnown RBP2.44□□□□□ -2.02
VPS13D-207ENST00000476169 ZNF14P17017 642 aaPredicted RBP2.44□□□□□ -2.02
VPS13D-207ENST00000476169 RPS3P23396 243 aaKnown RBP eCLIP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms