RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 U3KQE9 123 aa11.15□□□□□ -0.62
VARS-223ENST00000474643 FXYD6-FXYD2A0A087WZ82 144 aa11.14□□□□□ -0.63
VARS-223ENST00000474643 TAAR5O14804 337 aa11.14□□□□□ -0.63
VARS-223ENST00000474643 BUB3O43684 328 aa11.14□□□□□ -0.63
VARS-223ENST00000474643 MPDU1O75352 247 aa11.14□□□□□ -0.63
VARS-223ENST00000474643 DEFB131AP59861 70 aa11.14□□□□□ -0.63
VARS-223ENST00000474643 SELENOTP62341 195 aa11.14□□□□□ -0.63
VARS-223ENST00000474643 ARL16Q0P5N6 197 aa11.14□□□□□ -0.63
VARS-223ENST00000474643 LEMD1Q68G75 181 aa11.14□□□□□ -0.63
VARS-223ENST00000474643 CEMP1Q6PRD7 247 aaPredicted RBP11.14□□□□□ -0.63
VARS-223ENST00000474643 GLMPQ8WWB7 406 aa11.14□□□□□ -0.63
VARS-223ENST00000474643 PARD6GQ9BYG4 376 aaPredicted RBP11.14□□□□□ -0.63
VARS-223ENST00000474643 UQCC1Q9NVA1 299 aa11.14□□□□□ -0.63
VARS-223ENST00000474643 DOK5Q9P104 306 aa11.14□□□□□ -0.63
VARS-223ENST00000474643 FBXL17Q9UF56 701 aa11.14□□□□□ -0.63
VARS-223ENST00000474643 TRAV2A0A0B4J234 112 aa11.13□□□□□ -0.63
VARS-223ENST00000474643 A0A0D9SG52 128 aa11.13□□□□□ -0.63
VARS-223ENST00000474643 LINC00869P0C866 280 aa11.13□□□□□ -0.63
VARS-223ENST00000474643 NHLH2Q02577 135 aa11.13□□□□□ -0.63
VARS-223ENST00000474643 RAB31Q13636 194 aa11.13□□□□□ -0.63
VARS-223ENST00000474643 OR8I2Q8N0Y5 310 aa11.13□□□□□ -0.63
VARS-223ENST00000474643 OR5C1Q8NGR4 320 aa11.13□□□□□ -0.63
VARS-223ENST00000474643 OR11H2Q8NH07 326 aa11.13□□□□□ -0.63
VARS-223ENST00000474643 LINC00476Q8WZB0 136 aa11.13□□□□□ -0.63
VARS-223ENST00000474643 MFFQ9GZY8 342 aa11.13□□□□□ -0.63
VARS-223ENST00000474643 SLC25A22Q9H936 323 aa11.13□□□□□ -0.63
VARS-223ENST00000474643 ALMS1Q8TCU4 4167 aa11.12□□□□□ -0.63
VARS-223ENST00000474643 RNF222A6NCQ9 220 aa11.12□□□□□ -0.63
VARS-223ENST00000474643 OR5G3P0C626 314 aa11.12□□□□□ -0.63
VARS-223ENST00000474643 ZNF688P0C7X2 276 aa11.12□□□□□ -0.63
VARS-223ENST00000474643 ZNF266Q14584 549 aa11.12□□□□□ -0.63
VARS-223ENST00000474643 S100A7AQ86SG5 101 aa11.12□□□□□ -0.63
VARS-223ENST00000474643 ATP5SQ99766 215 aa11.12□□□□□ -0.63
VARS-223ENST00000474643 UBE2L5PA0A1B0GUS4 154 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 K7EQG2 157 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 AGPAT2O15120 278 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 PFDN1O60925 122 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 HYPMO75409 117 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 ATF4P18848 351 aaPredicted RBP11.11□□□□□ -0.63
VARS-223ENST00000474643 ZFP69Q49AA0 526 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 C1orf194Q5T5A4 169 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 TMEM182Q6ZP80 229 aaPredicted RBP11.11□□□□□ -0.63
VARS-223ENST00000474643 KCNRGQ8N5I3 272 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 OR11H4Q8NGC9 324 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 C11orf45Q8TAV5 145 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 PHLDA1Q8WV24 401 aaPredicted RBP11.11□□□□□ -0.63
VARS-223ENST00000474643 ARL6Q9H0F7 186 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 NRN1Q9NPD7 142 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 SLC45A2Q9UMX9 530 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 HIGD1AQ9Y241 93 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 WDR83OSQ9Y284 106 aa11.11□□□□□ -0.63
VARS-223ENST00000474643 ARPC5O15511 151 aa11.1□□□□□ -0.63
VARS-223ENST00000474643 GALR1P47211 349 aa11.1□□□□□ -0.63
VARS-223ENST00000474643 SNRPD3P62318 126 aaKnown RBP11.1□□□□□ -0.63
VARS-223ENST00000474643 FAM24BQ8N5W8 94 aa11.1□□□□□ -0.63
VARS-223ENST00000474643 ZNF98A6NK75 572 aa11.09□□□□□ -0.63
VARS-223ENST00000474643 SMLR1H3BR10 107 aa11.09□□□□□ -0.63
VARS-223ENST00000474643 IFNA5P01569 189 aa11.09□□□□□ -0.63
VARS-223ENST00000474643 C4BPBP20851 252 aa11.09□□□□□ -0.63
VARS-223ENST00000474643 CAMLGP49069 296 aa11.09□□□□□ -0.63
VARS-223ENST00000474643 PSMG4Q5JS54 123 aa11.09□□□□□ -0.63
VARS-223ENST00000474643 PXDC1Q5TGL8 231 aa11.09□□□□□ -0.63
VARS-223ENST00000474643 DCANP1Q8TF63 244 aa11.09□□□□□ -0.63
VARS-223ENST00000474643 KCNIP2Q9NS61 270 aa11.09□□□□□ -0.63
VARS-223ENST00000474643 COX7A2P2O60397 106 aa11.08□□□□□ -0.64
VARS-223ENST00000474643 FGF7P21781 194 aa11.08□□□□□ -0.64
VARS-223ENST00000474643 ID1P41134 155 aa11.08□□□□□ -0.64
VARS-223ENST00000474643 NANOS2P60321 138 aaKnown RBP11.08□□□□□ -0.64
VARS-223ENST00000474643 TMEM41BQ5BJD5 291 aa11.08□□□□□ -0.64
VARS-223ENST00000474643 Q6ZRG5 221 aa11.08□□□□□ -0.64
VARS-223ENST00000474643 MGST2Q99735 147 aa11.08□□□□□ -0.64
VARS-223ENST00000474643 SLC25A39Q9BZJ4 359 aaPredicted RBP11.08□□□□□ -0.64
VARS-223ENST00000474643 AGRNO00468 2067 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 BORCS7-ASMTA0A0B4J1R7 106 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 DEFB4AO15263 64 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 SPP1P10451 314 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 RPL29P47914 159 aaKnown RBP11.07□□□□□ -0.64
VARS-223ENST00000474643 EIF5AP63241 154 aaKnown RBP11.07□□□□□ -0.64
VARS-223ENST00000474643 CLINT1Q14677 625 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 ACTL10Q5JWF8 245 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 MORN3Q6PF18 240 aaPredicted RBP11.07□□□□□ -0.64
VARS-223ENST00000474643 LINC00052Q96N35 136 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 GPR82Q96P67 336 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 UHRF2Q96PU4 802 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 SCRT1Q9BWW7 348 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 WDR61Q9GZS3 305 aaKnown RBP11.07□□□□□ -0.64
VARS-223ENST00000474643 ARV1Q9H2C2 271 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 SLC25A32Q9H2D1 315 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 C11orf68Q9H3H3 251 aaKnown RBP11.07□□□□□ -0.64
VARS-223ENST00000474643 RNF24Q9Y225 148 aa11.07□□□□□ -0.64
VARS-223ENST00000474643 H3BRN7 92 aa11.06□□□□□ -0.64
VARS-223ENST00000474643 MEOX2P50222 304 aa11.06□□□□□ -0.64
VARS-223ENST00000474643 PLP1P60201 277 aa11.06□□□□□ -0.64
VARS-223ENST00000474643 NUTF2P61970 127 aaKnown RBP11.06□□□□□ -0.64
VARS-223ENST00000474643 SCGB1C1Q8TD33 95 aa11.06□□□□□ -0.64
VARS-223ENST00000474643 C16orf92Q96LL3 132 aa11.06□□□□□ -0.64
VARS-223ENST00000474643 ARPC5LQ9BPX5 153 aa11.06□□□□□ -0.64
VARS-223ENST00000474643 SHANK2-AS3Q9BTD1 123 aa11.06□□□□□ -0.64
VARS-223ENST00000474643 RSG1Q9BU20 258 aa11.06□□□□□ -0.64
VARS-223ENST00000474643 TIMM9Q9Y5J7 89 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms