RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 NMSQ5H8A3 153 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 SAMD13Q5VXD3 122 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 SNX29P2Q8IUI4 249 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 FAM219AQ8IW50 185 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 OR8I2Q8N0Y5 310 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 ARRDC1Q8N5I2 433 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 CCDC71LQ8N9Z2 235 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 RBPMSQ93062 196 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 ZNF503Q96F45 646 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 C17orf77Q96MU5 243 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 UHRF2Q96PU4 802 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 TMEM222Q9H0R3 208 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 VCX3BQ9H321 246 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 ZNF586Q9NXT0 402 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 COPZ2Q9P299 210 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 CACNG5Q9UF02 275 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 RAB26Q9ULW5 256 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 TRAV12-2A0A075B6T6 113 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 TRAV26-1A0A087WT03 109 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 ZFP92A6NM28 416 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 BOLA2-SMG1P6H3BVE0 249 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 DUSP14O95147 198 aaKnown RBP3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 APOA1P02647 267 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 CD3DP04234 171 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 OR5AC1P0C628 307 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 TBPP20226 339 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 MALP21145 153 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 RPS19P39019 145 aaKnown RBP3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 GALR1P47211 349 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 KLF9Q13886 244 aaPredicted RBP3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 GAMTQ14353 236 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 MEF2DQ14814 521 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 ESRGQ1W209 222 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 RNASE10Q5GAN6 216 aaKnown RBP3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 NOXA1Q86UR1 476 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 OR4D10Q8NGI6 311 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 OR13C8Q8NGS7 320 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 ZFAND1Q8TCF1 268 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 RXFP4Q8TDU9 374 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 GLYATL2Q8WU03 294 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 GNPNAT1Q96EK6 184 aaPredicted RBP3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 C16orf74Q96GX8 76 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 SLC25A32Q9H2D1 315 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 MRPS16Q9Y3D3 137 aaKnown RBP3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 TIMM8BQ9Y5J9 83 aaPredicted RBP3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 U3KQ87 197 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 TNXBP22105 4242 aa3.53□□□□□ -1.84
SNRNP40-204ENST00000474025 IGKV1OR2-108A0A075B7D4 117 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 TRAV8-2A0A0B4J237 113 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 TEX13DA0A0J9YY54 714 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 SMIM31A0A1B0GVY4 71 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 SNRPGP15A8MWD9 76 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 FAM25EA8MYX2 175 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 ZNF701M0R085 212 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 M6PRP20645 277 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 GPX4P36969 197 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 TAS2R60P59551 318 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 KRTAP10-1P60331 282 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 OR5I1Q13606 314 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 OR2F1Q13607 317 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 NEDD8Q15843 81 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 RNASE12Q5GAN4 147 aaKnown RBP3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 IGFL4Q6B9Z1 124 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 GPR141Q7Z602 305 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 SELENOHQ8IZQ5 122 aaKnown RBP3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 LGI3Q8N145 548 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 TMEM256Q8N2U0 113 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 LINC00612Q8N6U2 182 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 OR10J6PQ8NGY7 276 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 OR52I2Q8NH67 350 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 TERB2Q8NHR7 220 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 MARCH1Q8TCQ1 289 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 RNASE8Q8TDE3 154 aaKnown RBP3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 TMEM263Q8WUH6 116 aaKnown RBP3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 PPP1R14BQ96C90 147 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 RSG1Q9BU20 258 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 SLC25A39Q9BZJ4 359 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 NAA60Q9H7X0 242 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 NOP10Q9NPE3 64 aaKnown RBP3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 MDFICQ9P1T7 246 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 COMMD3Q9UBI1 195 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 RABL2AQ9UBK7 228 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 HSPB7Q9UBY9 170 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 CACFD1Q9UGQ2 172 aa3.52□□□□□ -1.85
SNRNP40-204ENST00000474025 A0A0J9YY99 117 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 ZNF98A6NK75 572 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 H3BNG1 76 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 GABARAPH6UMI1 98 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 HPGDSO60760 199 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 GABARAPO95166 117 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 TNFAIP8O95379 198 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 IFNA5P01569 189 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 SMR3BP02814 79 aaPredicted RBP3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 FABP1P07148 127 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 DNAH10OSP0CZ25 163 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 SULT1A3P0DMM9 295 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 SULT1A4P0DMN0 295 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 HTN1P15515 57 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 ZNF182P17025 639 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms