RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 PDYNP01213 254 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 SERPINE1P05121 402 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 P0C880 135 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 GABRA3P34903 492 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 TBPL1P62380 186 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 SPCS2Q15005 226 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 SURF2Q15527 256 aaPredicted RBP3.03□□□□□ -1.92
SEC22A-204ENST00000473494 AGTRAPQ6RW13 159 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 C5orf46Q6UWT4 87 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 RPS27LQ71UM5 84 aaKnown RBP3.03□□□□□ -1.92
SEC22A-204ENST00000473494 EIF4E3Q8N5X7 224 aaKnown RBP3.03□□□□□ -1.92
SEC22A-204ENST00000473494 GRPEL2Q8TAA5 225 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 CMBLQ96DG6 245 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 RMND5BQ96G75 393 aaPredicted RBP3.03□□□□□ -1.92
SEC22A-204ENST00000473494 B9D2Q9BPU9 175 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 OR2D2Q9H210 308 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 ASF1BQ9NVP2 202 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 OR52A1Q9UKL2 312 aa3.03□□□□□ -1.92
SEC22A-204ENST00000473494 ZNF443Q9Y2A4 671 aaPredicted RBP3.03□□□□□ -1.92
SEC22A-204ENST00000473494 CPAMD8Q8IZJ3 1885 aa3.03□□□□□ -1.93
SEC22A-204ENST00000473494 USP9XQ93008 2570 aaPredicted RBP3.03□□□□□ -1.93
SEC22A-204ENST00000473494 ZGRF1Q86YA3 2104 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 HECTD1Q9ULT8 2610 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 IGKV3D-11A0A0A0MRZ8 115 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 A0A1B0GX78 115 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 H3BMM0 161 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 EDF1O60869 148 aaKnown RBP3.02□□□□□ -1.93
SEC22A-204ENST00000473494 APOMO95445 188 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 FAM107AO95990 144 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 HLA-DRB1P01911 266 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 IGKV4-1P06312 121 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 GZMHP20718 246 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 CDK2P24941 298 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 CMPK1P30085 196 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 RPS20P60866 119 aaKnown RBP3.02□□□□□ -1.93
SEC22A-204ENST00000473494 PSPHP78330 225 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 BTG2P78543 158 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 DCDP81605 110 aaKnown RBP3.02□□□□□ -1.93
SEC22A-204ENST00000473494 TNFAIP6P98066 277 aaPredicted RBP3.02□□□□□ -1.93
SEC22A-204ENST00000473494 MMDQ15546 238 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 KCNJ8Q15842 424 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 ZNF141Q15928 474 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 C12orf74Q32Q52 190 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 LGALSLQ3ZCW2 172 aaPredicted RBP3.02□□□□□ -1.93
SEC22A-204ENST00000473494 TMEM128Q5BJH2 165 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 AKR1C8PQ5T2L2 129 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 C4orf33Q8N1A6 199 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 ANKRD29Q8N6D5 301 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 GDPD1Q8N9F7 314 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 PSMF1Q92530 271 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 TSLPQ969D9 159 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 UBE2WQ96B02 151 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 MS4A6EQ96DS6 147 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 ABHD14BQ96IU4 210 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 CNBD2Q96M20 576 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 TSPAN32Q96QS1 320 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 TMEM147Q9BVK8 224 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 TMEM222Q9H0R3 208 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 SH3BGRL3Q9H299 93 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 LRTM1Q9HBL6 345 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 PRTFDC1Q9NRG1 225 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 LYRM2Q9NU23 88 aaPredicted RBP3.02□□□□□ -1.93
SEC22A-204ENST00000473494 HIVEP3Q5T1R4 2406 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 ICE1Q9Y2F5 2266 aa3.02□□□□□ -1.93
SEC22A-204ENST00000473494 NCKAP5O14513 1909 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 ESPL1Q14674 2120 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 IGHV1-69-2A0A0G2JMI3 117 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 MAP1LC3B2A6NCE7 125 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 OR5H14A6NHG9 310 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 A8MT66 165 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 J3QKU1 62 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 HMGB3O15347 200 aaKnown RBP3.01□□□□□ -1.93
SEC22A-204ENST00000473494 SMIM24O75264 130 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 OPN1SWP03999 348 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 COX6A1P12074 109 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 SPI1P17947 270 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 OR10J1P30954 320 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 DEFA1P59665 94 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 GNG5P63218 68 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 FABP9Q0Z7S8 132 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 TAF9Q16594 264 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 PLPPR5Q32ZL2 321 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 CCDC58Q4VC31 144 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 TOMM20LQ6UXN7 152 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 LRP11Q86VZ4 500 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 OR11G2Q8NGC1 345 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 C12orf43Q96C57 262 aaKnown RBP3.01□□□□□ -1.93
SEC22A-204ENST00000473494 DNAJC30Q96LL9 226 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 GPER1Q99527 375 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 C20orf27Q9GZN8 174 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 MAP1LC3BQ9GZQ8 125 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 ALX4Q9H161 411 aaPredicted RBP3.01□□□□□ -1.93
SEC22A-204ENST00000473494 MED29Q9NX70 200 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 GSKIPQ9P0R6 139 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 PCTPQ9UKL6 214 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 ASH1LQ9NR48 2969 aaKnown RBP3.01□□□□□ -1.93
SEC22A-204ENST00000473494 PTPN13Q12923 2485 aa3.01□□□□□ -1.93
SEC22A-204ENST00000473494 FLNBO75369 2602 aaKnown RBP3.01□□□□□ -1.93
SEC22A-204ENST00000473494 A0A0B4J2C4 111 aa3□□□□□ -1.93
SEC22A-204ENST00000473494 A0A1W2PRE2 83 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms