RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 TECRQ9NZ01 308 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-217ENST00000473348 RNF24Q9Y225 148 aa9.5□□□□□ -0.89
TRAPPC12-217ENST00000473348 NOTCH3Q9UM47 2321 aa9.5□□□□□ -0.89
TRAPPC12-217ENST00000473348 CTXND1A0A1B0GTU2 59 aa9.49□□□□□ -0.89
TRAPPC12-217ENST00000473348 HMGB3O15347 200 aaKnown RBP9.49□□□□□ -0.89
TRAPPC12-217ENST00000473348 FHITP49789 147 aa9.49□□□□□ -0.89
TRAPPC12-217ENST00000473348 SULT1A2P50226 295 aa9.49□□□□□ -0.89
TRAPPC12-217ENST00000473348 C1orf194Q5T5A4 169 aa9.49□□□□□ -0.89
TRAPPC12-217ENST00000473348 C9orf66Q5T8R8 295 aa9.49□□□□□ -0.89
TRAPPC12-217ENST00000473348 SSX7Q7RTT5 188 aa9.49□□□□□ -0.89
TRAPPC12-217ENST00000473348 FAM213BQ8TBF2 198 aa9.49□□□□□ -0.89
TRAPPC12-217ENST00000473348 RAB24Q969Q5 203 aa9.49□□□□□ -0.89
TRAPPC12-217ENST00000473348 SLC25A2Q9BXI2 301 aa9.49□□□□□ -0.89
TRAPPC12-217ENST00000473348 SORL1Q92673 2214 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 HELTA6NFD8 242 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 IGLL1P15814 213 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 RPL7P18124 248 aaKnown RBP9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 RAB5CP51148 216 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 TAS2R45P59539 299 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 ZNF726P1Q15940 193 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 KHDC3LQ587J8 217 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 PRR31Q5SQ13 230 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 TEX261Q6UWH6 196 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 DPPA3Q6W0C5 159 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 SIGLEC15Q6ZMC9 328 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 TCF24Q7RTU0 167 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 BPIFA4PQ86YQ2 179 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 FAM167A-AS1Q96KT0 104 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 GPR82Q96P67 336 aa9.48□□□□□ -0.89
TRAPPC12-217ENST00000473348 MAP1LC3B2A6NCE7 125 aa9.47□□□□□ -0.89
TRAPPC12-217ENST00000473348 OR7C2O60412 319 aa9.47□□□□□ -0.89
TRAPPC12-217ENST00000473348 IGLV1-51P01701 117 aa9.47□□□□□ -0.89
TRAPPC12-217ENST00000473348 STAG3L2P0CL84 134 aa9.47□□□□□ -0.89
TRAPPC12-217ENST00000473348 STAG3L3P0CL85 134 aa9.47□□□□□ -0.89
TRAPPC12-217ENST00000473348 GP9P14770 177 aa9.47□□□□□ -0.89
TRAPPC12-217ENST00000473348 GALR1P47211 349 aa9.47□□□□□ -0.89
TRAPPC12-217ENST00000473348 DEFB114Q30KQ6 69 aa9.47□□□□□ -0.89
TRAPPC12-217ENST00000473348 TMEM61Q8N0U2 210 aa9.47□□□□□ -0.89
TRAPPC12-217ENST00000473348 ZNF680Q8NEM1 530 aa9.47□□□□□ -0.89
TRAPPC12-217ENST00000473348 MAP1LC3BQ9GZQ8 125 aa9.47□□□□□ -0.89
TRAPPC12-217ENST00000473348 IGKV3-7A0A075B6H7 116 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 MRPS12O15235 138 aaKnown RBP9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 IFNA7P01567 189 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 CD5P06127 495 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 ARL14EPLP0DKL9 152 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 PYYP10082 97 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 ATF4P18848 351 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 INSL3P51460 131 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 RPL11P62913 178 aaKnown RBP9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 CD300EQ496F6 205 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 FAM90A2PQ658T7 463 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 LCN15Q6UWW0 184 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 STXBP6Q8NFX7 210 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 RNF141Q8WVD5 230 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 ZNF503Q96F45 646 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 PAXXQ9BUH6 204 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 TMEM14CQ9P0S9 112 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 TRRAPQ9Y4A5 3859 aa9.46□□□□□ -0.9
TRAPPC12-217ENST00000473348 CMYA5Q8N3K9 4069 aa9.45□□□□□ -0.9
TRAPPC12-217ENST00000473348 ZNF705EA8MWA4 302 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC12-217ENST00000473348 H2AFB1P0C5Y9 115 aa9.45□□□□□ -0.9
TRAPPC12-217ENST00000473348 FGF8P55075 233 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC12-217ENST00000473348 UBE2L3P68036 154 aaKnown RBP9.45□□□□□ -0.9
TRAPPC12-217ENST00000473348 PQLC2Q6ZP29 291 aa9.45□□□□□ -0.9
TRAPPC12-217ENST00000473348 RBPMS2Q6ZRY4 209 aaKnown RBP9.45□□□□□ -0.9
TRAPPC12-217ENST00000473348 OR2K2Q8NGT1 345 aa9.45□□□□□ -0.9
TRAPPC12-217ENST00000473348 GPR61Q9BZJ8 451 aa9.45□□□□□ -0.9
TRAPPC12-217ENST00000473348 OR51M1Q9H341 326 aa9.45□□□□□ -0.9
TRAPPC12-217ENST00000473348 UBQLN2Q9UHD9 624 aa9.45□□□□□ -0.9
TRAPPC12-217ENST00000473348 SMAD5-AS1Q9Y6J3 95 aa9.45□□□□□ -0.9
TRAPPC12-217ENST00000473348 A0A087X0K7 114 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 TRAV25A0A0B4J276 109 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 IZUMO1RA6ND01 250 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 ZNF785A8K8V0 405 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 CXorf1O96002 111 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 OR10J4P0C629 311 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 IGLC2P0DOY2 106 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 IFITM2Q01629 132 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 LCN12Q6JVE5 192 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 IQCF2Q8IXL9 164 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 GBGT1Q8N5D6 347 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 MBD3L1Q8WWY6 194 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 FXYD5Q96DB9 178 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 MS4A6AQ9H2W1 248 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 NRN1Q9NPD7 142 aa9.44□□□□□ -0.9
TRAPPC12-217ENST00000473348 A0A1B0GV50 99 aa9.43□□□□□ -0.9
TRAPPC12-217ENST00000473348 H3BQ15 152 aa9.43□□□□□ -0.9
TRAPPC12-217ENST00000473348 H3BTX0 84 aa9.43□□□□□ -0.9
TRAPPC12-217ENST00000473348 TSPAN4O14817 238 aa9.43□□□□□ -0.9
TRAPPC12-217ENST00000473348 WIPF1O43516 503 aa9.43□□□□□ -0.9
TRAPPC12-217ENST00000473348 HIST1H1EP10412 219 aaKnown RBP9.43□□□□□ -0.9
TRAPPC12-217ENST00000473348 GCHFRP30047 84 aa9.43□□□□□ -0.9
TRAPPC12-217ENST00000473348 TFPI2P48307 235 aa9.43□□□□□ -0.9
TRAPPC12-217ENST00000473348 MEOX2P50222 304 aa9.43□□□□□ -0.9
TRAPPC12-217ENST00000473348 PAFAH1B2P68402 229 aa9.43□□□□□ -0.9
TRAPPC12-217ENST00000473348 GUCA2BQ16661 112 aa9.43□□□□□ -0.9
TRAPPC12-217ENST00000473348 OXLD1Q5BKU9 147 aa9.43□□□□□ -0.9
TRAPPC12-217ENST00000473348 SFT2D1Q8WV19 159 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms