RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 GGTLC1Q9BX51 225 aa6.82□□□□□ -1.32
SMC4-213ENST00000472282 WFDC10AQ9H1F0 79 aa6.82□□□□□ -1.32
SMC4-213ENST00000472282 EDA2RQ9HAV5 297 aa6.82□□□□□ -1.32
SMC4-213ENST00000472282 RETNQ9HD89 108 aa6.82□□□□□ -1.32
SMC4-213ENST00000472282 AP5S1Q9NUS5 200 aa6.82□□□□□ -1.32
SMC4-213ENST00000472282 DOK5Q9P104 306 aa6.82□□□□□ -1.32
SMC4-213ENST00000472282 SLC45A2Q9UMX9 530 aa6.82□□□□□ -1.32
SMC4-213ENST00000472282 TSPAN4O14817 238 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 DFFBO76075 338 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 CD7P09564 240 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 OR5G3P0C626 314 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 ORM2P19652 201 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 NUP62P37198 522 aaPredicted RBP6.81□□□□□ -1.32
SMC4-213ENST00000472282 RAB31Q13636 194 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 OPCMLQ14982 345 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 HAGHQ16775 308 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 MIC13Q5XKP0 118 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 FAM90A2PQ658T7 463 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 ZFAND6Q6FIF0 208 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 C16orf54Q6UWD8 224 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 GTSCR1Q86UQ5 136 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 STPG3Q8N7X2 389 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 GLMPQ8WWB7 406 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 GRAMD2BQ96HH9 432 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 AQP10Q96PS8 301 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 SPAG8Q99932 426 aaPredicted RBP6.81□□□□□ -1.32
SMC4-213ENST00000472282 ARL6Q9H0F7 186 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 ZMAT4Q9H898 229 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 FBXL17Q9UF56 701 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 TNFSF18Q9UNG2 199 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 STARD9Q9P2P6 4700 aa6.81□□□□□ -1.32
SMC4-213ENST00000472282 STAB2Q8WWQ8 2551 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 DNAH7Q8WXX0 4024 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 RNF222A6NCQ9 220 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 H3BRN7 92 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 BUB3O43684 328 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 MPDU1O75352 247 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 TFPI2P48307 235 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 CD81P60033 236 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 PLP1P60201 277 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 RPL11P62913 178 aaKnown RBP6.8□□□□□ -1.32
SMC4-213ENST00000472282 SIGLEC15Q6ZMC9 328 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 LINC00322Q6ZN03 302 aaPredicted RBP6.8□□□□□ -1.32
SMC4-213ENST00000472282 GBGT1Q8N5D6 347 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 STXBP6Q8NFX7 210 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 UHRF2Q96PU4 802 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 SCRT1Q9BWW7 348 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 NPCDR1Q9BY65 106 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 WDR61Q9GZS3 305 aaKnown RBP6.8□□□□□ -1.32
SMC4-213ENST00000472282 WFDC1Q9HC57 220 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 HIGD1AQ9Y241 93 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 PXMP4Q9Y6I8 212 aa6.8□□□□□ -1.32
SMC4-213ENST00000472282 RBMY1BA6NDE4 496 aaKnown RBP6.79□□□□□ -1.32
SMC4-213ENST00000472282 RBMY1EA6NEQ0 496 aaKnown RBP6.79□□□□□ -1.32
SMC4-213ENST00000472282 OR4C46A6NHA9 309 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 ARPC5O15511 151 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 COX7A2P2O60397 106 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 HYPMO75409 117 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 IFNA5P01569 189 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 CD5P06127 495 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 RBMY1DP0C7P1 496 aaKnown RBP6.79□□□□□ -1.32
SMC4-213ENST00000472282 RPL29P47914 159 aaKnown RBP6.79□□□□□ -1.32
SMC4-213ENST00000472282 AP2S1P53680 142 aaPredicted RBP6.79□□□□□ -1.32
SMC4-213ENST00000472282 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 B2MP61769 119 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 PATE2Q6UY27 113 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 DEFB125Q8N687 156 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 INO80EQ8NBZ0 244 aaPredicted RBP6.79□□□□□ -1.32
SMC4-213ENST00000472282 ST6GAL2Q96JF0 529 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 FAM110AQ9BQ89 295 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 NEURL2Q9BR09 285 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 SLC25A39Q9BZJ4 359 aaPredicted RBP6.79□□□□□ -1.32
SMC4-213ENST00000472282 ARV1Q9H2C2 271 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 SLC25A32Q9H2D1 315 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 SLC25A22Q9H936 323 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 SLC39A9Q9NUM3 307 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 UBQLN2Q9UHD9 624 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 PFDN2Q9UHV9 154 aa6.79□□□□□ -1.32
SMC4-213ENST00000472282 A0A1B0GVG6 124 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 HELTA6NFD8 242 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 ZNF98A6NK75 572 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 DNASE2O00115 360 aaPredicted RBP6.78□□□□□ -1.32
SMC4-213ENST00000472282 PAFAH1B2P68402 229 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 C1orf194Q5T5A4 169 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 PXDC1Q5TGL8 231 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 LEMD1Q68G75 181 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 Q6ZRG5 221 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 OR8I2Q8N0Y5 310 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 ZNF709Q8N972 641 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 SCGB1C1Q8TD33 95 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 SPATA25Q9BR10 227 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 SHANK2-AS3Q9BTD1 123 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 RSG1Q9BU20 258 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 MS4A6AQ9H2W1 248 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 TMPRSS5Q9H3S3 457 aa6.78□□□□□ -1.32
SMC4-213ENST00000472282 C17orf112F2Z3M2 114 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 K7EQG2 157 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 S100A7P31151 101 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 ZNF266Q14584 549 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 ODF3L2Q3SX64 289 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms