RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 HAMPP81172 84 aa10.96□□□□□ -0.65
NPHP3-ACAD11-201ENST00000471702 OTORQ9NRC9 128 aa10.96□□□□□ -0.65
NPHP3-ACAD11-201ENST00000471702 MBNL3Q9NUK0 354 aaKnown RBP10.96□□□□□ -0.65
NPHP3-ACAD11-201ENST00000471702 C2orf82Q6UX34 121 aa10.96□□□□□ -0.65
NPHP3-ACAD11-201ENST00000471702 ZNF479Q96JC4 524 aa10.96□□□□□ -0.65
NPHP3-ACAD11-201ENST00000471702 TRAV8-3A0A0A6YYJ7 113 aa10.96□□□□□ -0.65
NPHP3-ACAD11-201ENST00000471702 MRPL14Q6P1L8 145 aaKnown RBP10.96□□□□□ -0.65
NPHP3-ACAD11-201ENST00000471702 PSG8Q9UQ74 426 aa10.96□□□□□ -0.65
NPHP3-ACAD11-201ENST00000471702 K7ERS5 55 aa10.96□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 GZMMP51124 257 aa10.96□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 TRBV5-7A0A0A0MS05 114 aa10.96□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 F8VVB4 439 aa10.96□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 F8VWA3 439 aa10.96□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 OR9G9P0C7N8 305 aa10.96□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 IGFL4Q6B9Z1 124 aa10.96□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 C17orf77Q96MU5 243 aa10.96□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 A8MXK9 166 aa10.96□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 SSBP2P81877 361 aaPredicted RBP10.96□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 TTC28Q96AY4 2481 aa10.96□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 C10orf55Q5SWW7 151 aa10.95□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 IQCF6A8MYZ5 107 aa10.95□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 TMEM238C9JI98 176 aa10.95□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 IZUMO1RA6ND01 250 aa10.95□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 CFHR1Q03591 330 aa10.95□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.95□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 EPDR1Q9UM22 224 aa10.95□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 IGHV1-18A0A0C4DH31 117 aa10.95□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 A0A087WWL8 130 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 IGHV3-16A0A0C4DH30 117 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 PLPPR1Q8TBJ4 325 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 RASL10AQ92737 203 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 NAA38Q9BRA0 125 aaKnown RBP10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 TRAV5A0A0B4J249 113 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 TEX43Q6ZNM6 134 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 ZNF525Q8N782 197 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 NBL1P41271 181 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 ATP5IP56385 69 aaPredicted RBP10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 NHSL1Q5SYE7 1610 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 TMEM14DPA8MWL7 114 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 SIGMAR1Q99720 223 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 Q9HAA7 133 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 EXPH5Q8NEV8 1989 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 A0A1W2PR77 199 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 APOC4P55056 127 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 UPK2O00526 184 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 UNQ6494/PRO21346Q6UXR6 183 aa10.94□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 E9PLN8 166 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 SERF1AO75920 110 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 Q6AWC8 147 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 LINC00477Q96M19 166 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 MBD3L4A6NDZ8 208 aaPredicted RBP10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 MBD3L3A6NE82 208 aaPredicted RBP10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 MBD3L5A6NJ08 208 aaPredicted RBP10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 IGKCP01834 107 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 IGHMP01871 453 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 C1QTNF9P0C862 333 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 SMIM10L1P0DMW3 83 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 MBD3L2Q8NHZ7 208 aaPredicted RBP10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 SMIM10Q96HG1 83 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 ADAMTS9Q9P2N4 1935 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 WNK3Q9BYP7 1800 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 LINC01590Q5TEZ4 76 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 Q8TAT8 98 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 C1QTNF5Q9BXJ0 243 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 CACNA1AO00555 2505 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 A0A096LPF7 62 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 VCYO14598 125 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 SYNJ2BPP57105 145 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 TEX38Q6PEX7 206 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 CTHRC1Q96CG8 243 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 CASC2Q6XLA1 102 aa10.93□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 IGHV2-26A0A0B4J1V2 119 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 B4DSR2 109 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 NPDC1Q9NQX5 325 aaPredicted RBP10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 SPSB3Q6PJ21 355 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 PVRIGQ6DKI7 326 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 TMEM144Q7Z5S9 345 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 PRIMA1Q86XR5 153 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 XCL2Q9UBD3 114 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 LAGE3Q14657 143 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 SPXQ9BT56 116 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 PKIGQ9Y2B9 76 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 IGHV1-46P01743 117 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 RBM3P98179 157 aaKnown RBP10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 LY75O60449 1722 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 TICRRQ7Z2Z1 1910 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 YPEL1O60688 119 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 ATP5L2Q7Z4Y8 100 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 RNF166Q96A37 237 aaPredicted RBP10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 C5orf30Q96GV9 206 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 YPEL2Q96QA6 119 aa10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 RPUSD1Q9UJJ7 312 aaKnown RBP10.92□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 RPL18AQ02543 176 aaKnown RBP10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 C9orf153Q5TBE3 101 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 BPESC1Q9GZL8 116 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 MSRB2Q9Y3D2 182 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 IGKV1D-13A0A0B4J2D9 117 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 KNCNA6PVL3 124 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 IGKV1-13P0DP09 117 aa10.91□□□□□ -0.66
NPHP3-ACAD11-201ENST00000471702 TMEM200BQ69YZ2 307 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms