RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 FAM181BA6NEQ2 426 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 B4DEV8 164 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 NDUFB4O95168 129 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 TRBV12-3P01733 135 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 IGHV3-11P01762 117 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 RPL7P18124 248 aaKnown RBP7.23□□□□□ -1.25
VPS52-216ENST00000471309 HILS1P60008 231 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 TMEM241Q24JQ0 296 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 ZNF674Q2M3X9 581 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 C10orf99Q6UWK7 81 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 LCNL1Q6ZST4 164 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 Q6ZSV7 163 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 ZNF418Q8TF45 676 aaPredicted RBP7.23□□□□□ -1.25
VPS52-216ENST00000471309 GPR82Q96P67 336 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 METTL26Q96S19 204 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 DERL1Q9BUN8 251 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 C20orf24Q9BUV8 137 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 ELOVL1Q9BW60 279 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 SDF2L1Q9HCN8 221 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 OTORQ9NRC9 128 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 ZNF586Q9NXT0 402 aa7.23□□□□□ -1.25
VPS52-216ENST00000471309 CSPG4Q6UVK1 2322 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 A0A087WWC5 75 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 IGHV3-35A0A0C4DH35 117 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 C9JCJ5 164 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 DNASE2O00115 360 aaPredicted RBP7.22□□□□□ -1.25
VPS52-216ENST00000471309 BUB3O43684 328 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 GGCTO75223 188 aaKnown RBP7.22□□□□□ -1.25
VPS52-216ENST00000471309 RPLP1P05386 114 aaKnown RBP7.22□□□□□ -1.25
VPS52-216ENST00000471309 CRYBB3P26998 211 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 SUMO1P63165 101 aaKnown RBP7.22□□□□□ -1.25
VPS52-216ENST00000471309 BTN1A1Q13410 526 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 PDE6HQ13956 83 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 C1orf194Q5T5A4 169 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 LYPD1Q8N2G4 141 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 C5orf17Q8NAS9 161 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 C2CD4CQ8TF44 421 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 BLNKQ8WV28 456 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 HIST1H2BAQ96A08 127 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 UBE2E2Q96LR5 201 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 Q9H3A6 140 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 PEF1Q9UBV8 284 aaKnown RBP7.22□□□□□ -1.25
VPS52-216ENST00000471309 U3KQE9 123 aa7.22□□□□□ -1.25
VPS52-216ENST00000471309 SETD2Q9BYW2 2564 aaPredicted RBP7.21□□□□□ -1.25
VPS52-216ENST00000471309 CCDC168Q8NDH2 2452 aa7.21□□□□□ -1.25
VPS52-216ENST00000471309 TRBV20OR9-2A0A075B6H5 130 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 IGHV3OR16-8A0A075B7F1 116 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 PEX7O00628 323 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 ZNF253O75346 499 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 LGALS1P09382 135 aaKnown RBP7.21□□□□□ -1.26
VPS52-216ENST00000471309 CD99P14209 185 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 RPL35P42766 123 aaKnown RBP7.21□□□□□ -1.26
VPS52-216ENST00000471309 RANP62826 216 aaKnown RBP7.21□□□□□ -1.26
VPS52-216ENST00000471309 RPL23P62829 140 aaKnown RBP7.21□□□□□ -1.26
VPS52-216ENST00000471309 SIGLEC15Q6ZMC9 328 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 LINC01551Q86U37 167 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 OR8I2Q8N0Y5 310 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 JMJD8Q96S16 334 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 KRTAP3-2Q9BYR7 98 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 RPS10P5Q9NQ39 176 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 EPDR1Q9UM22 224 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 PRELID1Q9Y255 219 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 LY96Q9Y6Y9 160 aa7.21□□□□□ -1.26
VPS52-216ENST00000471309 ZANQ9Y493 2812 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 A0A087X0K7 114 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 PGPA6NDG6 321 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 H3BTX0 84 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 SLC25A5P05141 298 aaKnown RBP7.2□□□□□ -1.26
VPS52-216ENST00000471309 SNRPCP09234 159 aaKnown RBP7.2□□□□□ -1.26
VPS52-216ENST00000471309 AKR1C3P42330 323 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 MEOX2P50222 304 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 CNN1P51911 297 aaKnown RBP7.2□□□□□ -1.26
VPS52-216ENST00000471309 ADIRFQ15847 76 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 UNQ9165/PRO28630Q6UXU0 137 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 GPHB5Q86YW7 130 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 CBLN2Q8IUK8 224 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 KLHDC1Q8N7A1 406 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 ATG101Q9BSB4 218 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 C16orf95Q9H693 158 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 SMCO4Q9NRQ5 59 aa7.2□□□□□ -1.26
VPS52-216ENST00000471309 ZNF469Q96JG9 3925 aaPredicted RBP7.2□□□□□ -1.26
VPS52-216ENST00000471309 HELTA6NFD8 242 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 SLC17A3O00476 420 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 TSPAN4O14817 238 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 TCRAP04437 139 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 CRYBA1P05813 215 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 ATF4P18848 351 aaPredicted RBP7.19□□□□□ -1.26
VPS52-216ENST00000471309 GALR1P47211 349 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 GNG4P50150 75 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 TAS2R60P59551 318 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 PSG9Q00887 426 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 CENPWQ5EE01 88 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 TMEM88Q6PEY1 159 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 ARL6IP6Q8N6S5 226 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 WIPF2Q8TF74 440 aaPredicted RBP7.19□□□□□ -1.26
VPS52-216ENST00000471309 GLMPQ8WWB7 406 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 GRAMD2BQ96HH9 432 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 IGF2BP2-AS1Q96M15 143 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 C17orf77Q96MU5 243 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms